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PI0006705 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006705
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDynein light chain
Genome locationchr09:5320614..5322952
RNA-Seq ExpressionPI0006705
SyntenyPI0006705
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.1e-6598.51Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLN LILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]1.5e-6294.03Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLN LILKKKAGE QE RDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

XP_022973572.1 dynein light chain LC6, flagellar outer arm [Cucurbita maxima]2.6e-6293.28Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLN LILKKKAGE QE RDRLN+RVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]6.8e-6394.78Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLN LILKKKAGE QE RDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]4.7e-6496.27Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFL+ LILKKKAGEQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain5.5e-6698.51Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLN LILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

A0A1S3CSY6 Dynein light chain5.5e-6698.51Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLN LILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

A0A6J1CWZ8 Dynein light chain8.2e-6292.54Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLN LI KKKA EQQE+RDRLN+RVRASDM FPLQNRAFSCARELLDSMPGKLDSKR ALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

A0A6J1FHG9 Dynein light chain7.4e-6394.03Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLN LILKKKAGE QE RDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

A0A6J1I7W2 Dynein light chain1.3e-6293.28Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLN LILKKKAGE QE RDRLN+RVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSS+GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGASLKD

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm4.0e-1342.86Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  + P WHCIVG +FGSYVTH    F+YF + +V +LLFK+
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

O96860 Dynein light chain 2, cytoplasmic2.3e-1344.05Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM+  +Q  A  CA + L+    + D   +A  +KKEFD  + P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q22799 Dynein light chain 1, cytoplasmic1.8e-1344.05Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM+  +Q  A  CA + L+    + D   +A  +KKEFD  + P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q24117 Dynein light chain 1, cytoplasmic2.3e-1344.05Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM+  +Q  A  CA + L+    + D   +A  +KKEFD  + P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q3MHR3 Dynein light chain 2, cytoplasmic4.0e-1342.86Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM+  +Q  A  CA + ++    + D   +A  +KKEFD  + P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein7.6e-5276.56Show/hide
Query:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT
        M+G E+ELERRSKFLN LI KKKA EQQ+Q+D  NVRVRASDM  P QNRAFS +RE+L++ PGK D+KRLA ALKK+FDS++GPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSR
        HS GGFLYF IDKVY+LLFKTAVEPL +
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 112.4e-1340.91Show/hide
Query:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP
        V  SDM   +Q +A + A + LD +    D K +A  +KKEFD  +G  W C+VG++FG + THS G F+YF ++ +  L+FK A  P
Subjt:  VRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP

AT3G16120.1 Dynein light chain type 1 family protein1.5e-1240.7Show/hide
Query:  RVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA
        +V  +DM   +Q +A   A + LD +    DS  +A  +KKEFD  +G  W C+VGT+FG + THS G F+YF +  +  L+FK A
Subjt:  RVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA

AT4G27360.1 Dynein light chain type 1 family protein6.9e-1344.58Show/hide
Query:  SDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV
        +DM   ++  A S A + LD      +  ++A  +KKEFD S+G  W CIVGT FGS+VTH  G F++FS+  + ILLFK +V
Subjt:  SDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV

AT5G20110.1 Dynein light chain type 1 family protein4.9e-2760.42Show/hide
Query:  DRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS
        + L VR+ A+DM   +Q  AF CAR  LDS+  K  SK +A  LKKEFD  +GPAWHCIVG+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Subjt:  DRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGCGGAAATGGAGCTTGAGCGACGGAGTAAGTTTCTGAATGAGCTTATTTTGAAGAAGAAGGCAGGAGAGCAGCAAGAGCAGCGCGATCGTCTCAATGTTCG
CGTTAGAGCCTCCGATATGGCCTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGTCTCGCTCTTG
CCCTTAAAAAGGAATTTGATTCCTCCTTTGGTCCGGCATGGCATTGCATCGTGGGAACTAGCTTTGGGTCCTATGTAACACATTCCCTTGGTGGGTTCTTGTATTTTTCA
ATAGATAAAGTTTATATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTATCTCGTGGAGCATCCTTGAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAGCGGAAATGGAGCTTGAGCGACGGAGTAAGTTTCTGAATGAGCTTATTTTGAAGAAGAAGGCAGGAGAGCAGCAAGAGCAGCGCGATCGTCTCAATGTTCG
CGTTAGAGCCTCCGATATGGCCTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGTCTCGCTCTTG
CCCTTAAAAAGGAATTTGATTCCTCCTTTGGTCCGGCATGGCATTGCATCGTGGGAACTAGCTTTGGGTCCTATGTAACACATTCCCTTGGTGGGTTCTTGTATTTTTCA
ATAGATAAAGTTTATATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTATCTCGTGGAGCATCCTTGAAAGATTGA
Protein sequenceShow/hide protein sequence
MDGAEMELERRSKFLNELILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSFGPAWHCIVGTSFGSYVTHSLGGFLYFS
IDKVYILLFKTAVEPLSRGASLKD