CuGenDBv2

Gene ID	PI0006729
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	pheophorbide a oxygenase, chloroplastic
Genome location	chr12:19733749..19734736
RNA-Seq Expression	PI0006729
Synteny	PI0006729
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0043227 - membrane-bounded organelle (cellular component) GO:0043229 - intracellular organelle (cellular component) GO:0005488 - binding (molecular function) GO:0010277 - chlorophyllide a oxygenase [overall] activity (molecular function)
InterPro domains	IPR013626 - Pheophorbide a oxygenase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019292.1 Pheophorbide a oxygenase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-57

68.33

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQ+VPRWHEHWTSNKVYDGDMIV QGQEKIFL+ME STD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSKCECKS----------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHAEID
        WFGA SQ+PLPSTVLSK +              ATAGIPSALQ+RILLA+ AL SAGLAYALFELQKNF FIDYVHAEID
Subjt:  WFGACSQKPLPSTVLSKCECKS----------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHAEID

XP_008462467.1 PREDICTED: pheophorbide a oxygenase, chloroplastic [Cucumis melo]

4.4e-56

62.56

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WF A SQ+PLPSTVLSK                CK                     ATAGIPS+LQIR+LLAS ALASAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

XP_023519435.1 pheophorbide a oxygenase, chloroplastic [Cucurbita pepo subsp. pepo]

4.4e-56

62.07

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQ+VPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WFGA +Q+PLPSTVLSK             C S                       ATAGIPSALQ+RILLA+ ALASAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

XP_031740836.1 pheophorbide a oxygenase, chloroplastic [Cucumis sativus]

2.3e-57

63.55

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WFGA SQ+PLPSTVLSK                CK                     ATAGIPSALQIRILLAS ALASAGLAYALFELQKNF FIDY+HA
Subjt:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

XP_038894382.1 pheophorbide a oxygenase, chloroplastic [Benincasa hispida]

4.0e-57

63.05

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WFGA S +PLPSTVLSK                CK                     ATAGIPSALQIR+LLA+FALASAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSG3 Rieske domain-containing protein

8.0e-56

69.41

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSKCECKSWATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHAEID
        WFGA SQ+PLPSTVLSK +         P    IRILLAS ALASAGLAYALFELQKNF FIDY+HAEID
Subjt:  WFGACSQKPLPSTVLSKCECKSWATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHAEID

A0A1S3CII7 pheophorbide a oxygenase, chloroplastic

2.1e-56

62.56

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WF A SQ+PLPSTVLSK                CK                     ATAGIPS+LQIR+LLAS ALASAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

A0A5D3DBC9 Pheophorbide a oxygenase

2.1e-56

62.56

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIV QGQEKIFL+MEGSTD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WF A SQ+PLPSTVLSK                CK                     ATAGIPS+LQIR+LLAS ALASAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK--------------CECKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

A0A6J1HMG2 pheophorbide a oxygenase, chloroplastic

1.8e-55

61.58

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQ+VPRWHEHWTSNKVYDGDMIV QGQEKIFL+ME STD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WFGA SQ+PLPSTVLSK             C S                       ATAGIPSALQ+RILLA+ AL SAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

A0A6J1HYR3 pheophorbide a oxygenase, chloroplastic

1.8e-55

61.58

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE
        MGPGKTRSIVCSARNFFQFSMPGPAWWQ+VPRWHEHWTSNKVYDGDMIV QGQEKIFL+ME STD                            HGK Q E
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTD----------------------------HGKSQSE

Query:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA
        WFGA SQ+PLPSTVLSK             C S                       ATAGIPSALQ+RILLA+ AL SAGLAYALFELQKNF FIDYVHA
Subjt:  WFGACSQKPLPSTVLSK-----------CECKSW----------------------ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYVHA

Query:  EID
        EID
Subjt:  EID

SwissProt top hits

e value

%identity

Alignment

Q0DV66 Pheophorbide a oxygenase, chloroplastic

1.4e-44

51.71

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGSTD----------------------------HGKSQ
        M PGKTRSIVCSARNFFQFSMPG AWWQ+VPRW+EHWTSN VYDGDMIV QGQEKIFL  + E S D                             G SQ
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGSTD----------------------------HGKSQ

Query:  SEWFGACSQKPLPSTVLSKCE--------------CKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYV
         +WFG  SQ+ LPSTVLSK E              CK                     ATAGIP+ +Q R+LLA+ AL SA +AYA + LQKNF F+DYV
Subjt:  SEWFGACSQKPLPSTVLSKCE--------------CKS-------------------WATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFIDYV

Query:  HAEID
        HAEID
Subjt:  HAEID

Q9FYC2 Pheophorbide a oxygenase, chloroplastic

3.4e-43

50.24

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGS-----------------------------TDHGKS
        M PGKTRSIVCSARNFFQFS+PGPAWWQVVPRW+EHWTSN VYDGDMIV QGQEK+FL  +ME                                 HGKS
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGS-----------------------------TDHGKS

Query:  QSEWFGAC-SQKPLPSTVLSK--------------CECKS------------------W-ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFID
        Q EWFG+  S +PLPSTVL+K                CK                   W ATAG+PS +QIR++LA  +L SA  AYAL E +KNF F D
Subjt:  QSEWFGAC-SQKPLPSTVLSK--------------CECKS------------------W-ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFID

Query:  YVHAEID
        YVH+EI+
Subjt:  YVHAEID

Arabidopsis top hits

e value

%identity

Alignment

AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain

2.4e-44

50.24

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Query:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGS-----------------------------TDHGKS
        M PGKTRSIVCSARNFFQFS+PGPAWWQVVPRW+EHWTSN VYDGDMIV QGQEK+FL  +ME                                 HGKS
Subjt:  MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFL--TMEGS-----------------------------TDHGKS

Query:  QSEWFGAC-SQKPLPSTVLSK--------------CECKS------------------W-ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFID
        Q EWFG+  S +PLPSTVL+K                CK                   W ATAG+PS +QIR++LA  +L SA  AYAL E +KNF F D
Subjt:  QSEWFGAC-SQKPLPSTVLSK--------------CECKS------------------W-ATAGIPSALQIRILLASFALASAGLAYALFELQKNFGFID

Query:  YVHAEID
        YVH+EI+
Subjt:  YVHAEID

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTCCTGGAAAAACTCGTTCTATTGTATGTAGTGCTCGAAACTTCTTCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTG
GACATCGAATAAGGTATATGATGGAGACATGATTGTTCGTCAGGGTCAGGAGAAGATATTCTTAACGATGGAAGGTTCGACAGATCATGGAAAGAGCCAATCTGAATGGT
TCGGGGCTTGCAGCCAAAAGCCTCTGCCATCAACAGTTCTATCTAAATGTGAGTGCAAAAGCTGGGCCACCGCCGGCATCCCTTCTGCTTTACAGATACGTATTCTTCTC
GCCAGTTTTGCACTTGCAAGCGCCGGCTTGGCTTACGCTCTGTTTGAACTTCAAAAGAATTTTGGGTTCATTGACTATGTTCATGCCGAGATTGATTTGAAGATACCATT
AGAGACTGAGAGAGAGAAATTGTTGTGTAGAGAAGTAGGATTTTAA

mRNA sequence

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Protein sequence

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MGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVRQGQEKIFLTMEGSTDHGKSQSEWFGACSQKPLPSTVLSKCECKSWATAGIPSALQIRILL
ASFALASAGLAYALFELQKNFGFIDYVHAEIDLKIPLETEREKLLCREVGF

PI0006729 (gene) of Melon (PI 482460) v1 genome