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PI0006744 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006744
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr04:24976713..24977420
RNA-Seq ExpressionPI0006744
SyntenyPI0006744
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.8e-0442.68Show/hide
Query:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
        L++ IDDP  K  Q    +A +TR  S PKQ+  P      Q  A   +++DDE ++K+INE V++P+  G E+VFQ QANL
Subjt:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
TYK23898.1 gag-pol [Cucumis melo var. makuwa]1.1e-0436.56Show/hide
Query:  NAGIDDATLAPELQTTVFLDEPIDDPTPKENQTTLVEAGETRALSLPKQTENPQHHAAEENDDE-EFYKYINEVVTKPVMNGLEEVFQTQANL
        N G+++ATL     T    +EP+DD   K  Q    + GE    S  KQT   Q +   E+DDE +++K+I++   KP+M+ LE++FQ Q++L
Subjt:  NAGIDDATLAPELQTTVFLDEPIDDPTPKENQTTLVEAGETRALSLPKQTENPQHHAAEENDDE-EFYKYINEVVTKPVMNGLEEVFQTQANL
TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.8e-0442.68Show/hide
Query:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
        L++ IDDP  K  Q    +A +TR  S PKQ+  P      Q  A   +++DDE ++K+INE V++P+  G E+VFQ QANL
Subjt:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein8.7e-0542.68Show/hide
Query:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
        L++ IDDP  K  Q    +A +TR  S PKQ+  P      Q  A   +++DDE ++K+INE V++P+  G E+VFQ QANL
Subjt:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
A0A5D3DK59 Gag-pol5.1e-0536.56Show/hide
Query:  NAGIDDATLAPELQTTVFLDEPIDDPTPKENQTTLVEAGETRALSLPKQTENPQHHAAEENDDE-EFYKYINEVVTKPVMNGLEEVFQTQANL
        N G+++ATL     T    +EP+DD   K  Q    + GE    S  KQT   Q +   E+DDE +++K+I++   KP+M+ LE++FQ Q++L
Subjt:  NAGIDDATLAPELQTTVFLDEPIDDPTPKENQTTLVEAGETRALSLPKQTENPQHHAAEENDDE-EFYKYINEVVTKPVMNGLEEVFQTQANL
A0A5D3E1H0 Uncharacterized protein8.7e-0542.68Show/hide
Query:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
        L++ IDDP  K  Q    +A +TR  S PKQ+  P      Q  A   +++DDE ++K+INE V++P+  G E+VFQ QANL
Subjt:  LDEPIDDPTPKENQTTLVEAGETRALSLPKQTENP------QHHAA--EENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTCAAATAACTGTCCCACTTGTTCGCAAGAGGAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGATCCCATTGAACCTAT
TCCTCTTGTGATCGAGAGCCCTACGAAGGTGAAAAAGACAAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTTGAAGAGCCAGACCTCCCCATAATCCAAATTCCTT
CTCCCCAACAATCCAAAAATTCAAGCCCTGCCCGCCCAATCCAAATTGCTTCCACTCCCAACTCCCCACGGCAAGAGGAAAATCCTCAATCTCTTGTCGCCGAAGCCCTT
GATAAAACCACCTTCTCGCCGAATATTATATCTGATGAGCAGCTCAACGCGGGAATTGATGATGCGACGTTGGCACCTGAGTTGCAAACCACAGTCTTTCTTGATGAGCC
GATTGATGACCCAACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCTTTCGCTGCCTAAGCAAACCGAAAATCCACAACATCATGCGGCGG
AAGAGAATGACGATGAAGAATTCTACAAGTACATCAATGAGGTAGTCACCAAGCCAGTGATGAATGGACTTGAAGAAGTCTTCCAAACCCAAGCCAATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTCAAATAACTGTCCCACTTGTTCGCAAGAGGAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGATCCCATTGAACCTAT
TCCTCTTGTGATCGAGAGCCCTACGAAGGTGAAAAAGACAAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTTGAAGAGCCAGACCTCCCCATAATCCAAATTCCTT
CTCCCCAACAATCCAAAAATTCAAGCCCTGCCCGCCCAATCCAAATTGCTTCCACTCCCAACTCCCCACGGCAAGAGGAAAATCCTCAATCTCTTGTCGCCGAAGCCCTT
GATAAAACCACCTTCTCGCCGAATATTATATCTGATGAGCAGCTCAACGCGGGAATTGATGATGCGACGTTGGCACCTGAGTTGCAAACCACAGTCTTTCTTGATGAGCC
GATTGATGACCCAACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCTTTCGCTGCCTAAGCAAACCGAAAATCCACAACATCATGCGGCGG
AAGAGAATGACGATGAAGAATTCTACAAGTACATCAATGAGGTAGTCACCAAGCCAGTGATGAATGGACTTGAAGAAGTCTTCCAAACCCAAGCCAATCTATAA
Protein sequenceShow/hide protein sequence
MESQITVPLVRKRKGEGEASGSTKQKKHKAKDPIEPIPLVIESPTKVKKTKATRPPSPPQPLEEPDLPIIQIPSPQQSKNSSPARPIQIASTPNSPRQEENPQSLVAEAL
DKTTFSPNIISDEQLNAGIDDATLAPELQTTVFLDEPIDDPTPKENQTTLVEAGETRALSLPKQTENPQHHAAEENDDEEFYKYINEVVTKPVMNGLEEVFQTQANL