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PI0006771 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006771
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionEnzymatic polyprotein
Genome locationchr12:21064410..21066217
RNA-Seq ExpressionPI0006771
SyntenyPI0006771
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]7.1e-5774.84Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPT+SSTPPRPS NL+RP GG+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTK
          +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSKIFP+ FNFLPEDL+K K
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTK

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]5.8e-5977.07Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PT+SSTPPRPSANL+RPFG + QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFPE FNFLPEDLRK
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.9e-5875.78Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPT+SSTPPRPS NL+RP  G+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNF
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKT+ F
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNF

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]5.1e-5578.72Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD
        MSADQYAMDLGFTTVTRS++RSS IRIES T+SSTPPRPSANL+RPFGG  QMRP ASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK + +YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD

Query:  PIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNFTSLF
         IIEPEYQS+TL++TVSKIF + FN LPEDLRKT+NF SLF
Subjt:  PIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNFTSLF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]2.7e-5677.12Show/hide
Query:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAP
        R +STSS+G+R SSS N APSPMSADQYAMDLGFTTVTRS+ARSS I+I SPTKSSTPPR SANL+RP   + QMRP ASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDL
        +KRF+PR EIK+YFQK V +YD IIEPEYQSLTL+ETVSKIFP+ FNFLP+DL
Subjt:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.4e-5875.78Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPT+SSTPPRPS NL+RP  G+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNF
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKT+ F
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNF

A0A5D3BM67 Uncharacterized protein2.5e-5578.72Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD
        MSADQYAMDLGFTTVTRS++RSS IRIES T+SSTPPRPSANL+RPFGG  QMRP ASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK + +YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYD

Query:  PIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNFTSLF
         IIEPEYQS+TL++TVSKIF + FN LPEDLRKT+NF SLF
Subjt:  PIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNFTSLF

A0A5D3DHH1 Uncharacterized protein2.1e-4669.68Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESST-PPTTYSQA
        RGR +STSSKG+R SSS N  PS +SA QYA+DLGFT VTRS++R  GI I S T+SSTP RPSANL+RP G + QMR  ASP SN+ESST PPTTYSQA
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESST-PPTTYSQA

Query:  VAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDE-TVSKIFPEGFNFLPE
        V P+KRF+PRPE KTYF+K + +Y P IE EYQ+LTL+E TVSKIFP+GFNFLPE
Subjt:  VAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDE-TVSKIFPEGFNFLPE

A0A5D3E4J4 Uncharacterized protein2.8e-5977.07Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PT+SSTPPRPSANL+RPFG + QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFPE FNFLPEDLRK
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRK

E5GCE6 Uncharacterized protein3.5e-5774.84Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPT+SSTPPRPS NL+RP GG+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTK
          +KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSKIFP+ FNFLPEDL+K K
Subjt:  APEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTK

SwissProt top hitse value%identityAlignment
P03554 Enzymatic polyprotein1.9e-0455Show/hide
Query:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL
        K+I++LLD  +I+PSKSP    AF VNN AEK RG  R++
Subjt:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL

P03555 Enzymatic polyprotein1.9e-0455Show/hide
Query:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL
        K+I++LLD  +I+PSKSP    AF VNN AEK RG  R++
Subjt:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL

P03556 Enzymatic polyprotein1.9e-0455Show/hide
Query:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL
        K+I++LLD  +I+PSKSP    AF VNN AEK RG  R++
Subjt:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL

Q02964 Enzymatic polyprotein1.9e-0455Show/hide
Query:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL
        K+I++LLD  +I+PSKSP    AF VNN AEK RG  R++
Subjt:  KEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL

Q6XKE6 Genome polyprotein7.3e-0444Show/hide
Query:  MNSDLLTHCRKEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL
        MN + L    KE  +L    LI PS S W+C AFYVN  +E+ RG  R++
Subjt:  MNSDLLTHCRKEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRIL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGACTTGCTAACACATTGCAGGAAAGAAATACAAGACTTATTAGATAAACATCTAATAAGACCTTCAAAAAGTCCATGGTCATGTGCAGCCTTCTATGTTAA
TAATGCTGCAGAAAAGGAGCGTGGGGTTCCAAGAATCCTAGAGAAAAATGATATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTT
CTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAA
TCTCCCACGAAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTTTGGCGGAATAACTCAAATGAGGCCTCATGCCTCTCCTTTATCAAATTTGGAGTC
ATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTA
TCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAATTTTACG
AGTTTATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGACTTGCTAACACATTGCAGGAAAGAAATACAAGACTTATTAGATAAACATCTAATAAGACCTTCAAAAAGTCCATGGTCATGTGCAGCCTTCTATGTTAA
TAATGCTGCAGAAAAGGAGCGTGGGGTTCCAAGAATCCTAGAGAAAAATGATATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTT
CTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAA
TCTCCCACGAAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTTTGGCGGAATAACTCAAATGAGGCCTCATGCCTCTCCTTTATCAAATTTGGAGTC
ATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTA
TCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAATTTTACG
AGTTTATTCTAG
Protein sequenceShow/hide protein sequence
MNSDLLTHCRKEIQDLLDKHLIRPSKSPWSCAAFYVNNAAEKERGVPRILEKNDIVRGRGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIE
SPTKSSTPPRPSANLVRPFGGITQMRPHASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTKNFT
SLF