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PI0006777 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006777
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:10138590..10138778
RNA-Seq ExpressionPI0006777
SyntenyPI0006777
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053586.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-1269.49Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MAD+T E AMAE+ERKINLLMK+V+ERDH+I ALR+HM+ HET +LSQ  VVK  DK K
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

KAA0054645.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-1266.13Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML
        MADVTVE +MAE+ERKIN LMKVV+ERDHEI  L+D MKA++T +LS+   +K +DKGKA+L
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML

TYK04218.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-1271.19Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MADVTVE AMAE+ERK+N LMK ++E+DHEI ALR+HM+ HETT+ SQ LVVK  DKGK
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

TYK05028.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-1267.74Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML
        MA+VTVE A+ ++ERKINLLMK+V+ERDHEIVALR+ M+  ETTKLSQ L+VK  DKGK ++
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML

TYK08171.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-1269.49Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MAD+TVE A+AE+ERK+N LMKVV+ERDHEI  LR+ M+ HETTK SQ  VVK  DKGK
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

TrEMBL top hitse value%identityAlignment
A0A5A7UH83 Ty3-gypsy retrotransposon protein1.2e-1269.49Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MAD+T E AMAE+ERKINLLMK+V+ERDH+I ALR+HM+ HET +LSQ  VVK  DK K
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

A0A5A7UWX8 Ty3-gypsy retrotransposon protein1.6e-1269.49Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MAD+TVE A+AE+ERK+N LMKVV+ERDHEI  LR+ M+ HETTK SQ  VVK  DKGK
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

A0A5D3BYX4 Ty3-gypsy retrotransposon protein5.5e-1371.19Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK
        MADVTVE AMAE+ERK+N LMK ++E+DHEI ALR+HM+ HETT+ SQ LVVK  DKGK
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGK

A0A5D3C181 Ty3-gypsy retrotransposon protein9.4e-1367.74Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML
        MA+VTVE A+ ++ERKINLLMK+V+ERDHEIVALR+ M+  ETTKLSQ L+VK  DKGK ++
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML

A0A5D3C9H6 Ty3-gypsy retrotransposon protein1.6e-1266.13Show/hide
Query:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML
        MADVTVE +MAE+ERKIN LMKVV+ERDHEI  L+D MKA++T +LS+   +K +DKGKA+L
Subjt:  MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATGTAACAGTTGAGGTAGCCATGGCAGAGGTGGAAAGGAAAATAAATCTTCTAATGAAAGTTGTCGATGAACGAGATCATGAAATTGTCGCTTTAAGAGATCA
TATGAAGGCTCATGAAACTACTAAGTTAAGTCAAATTCTTGTTGTTAAAGGTGACGATAAAGGGAAAGCTATGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATGTAACAGTTGAGGTAGCCATGGCAGAGGTGGAAAGGAAAATAAATCTTCTAATGAAAGTTGTCGATGAACGAGATCATGAAATTGTCGCTTTAAGAGATCA
TATGAAGGCTCATGAAACTACTAAGTTAAGTCAAATTCTTGTTGTTAAAGGTGACGATAAAGGGAAAGCTATGTTGTAG
Protein sequenceShow/hide protein sequence
MADVTVEVAMAEVERKINLLMKVVDERDHEIVALRDHMKAHETTKLSQILVVKGDDKGKAML