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PI0006778 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006778
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr02:8515492..8516004
RNA-Seq ExpressionPI0006778
SyntenyPI0006778
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]3.3e-2242.65Show/hide
Query:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL
        ++ALE I+WPG  W+   T KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY        N  ++    +++W++ P  A PFL   + L
Subjt:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL

Query:  CVKAVPFLYAMNSIPIPGGLCNQMALNHTITFHAHK
         +KA P L     + +  G+C    L+  IT H +K
Subjt:  CVKAVPFLYAMNSIPIPGGLCNQMALNHTITFHAHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.1e-2552.42Show/hide
Query:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA
        A++ +++IVWP A    T T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NLG ++  + LSWMR PK+A PF +T++ 
Subjt:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA

Query:  LCVKAV-PFLYAMNSIPIPGGLCN
        LC+K +      +  I + GG CN
Subjt:  LCVKAV-PFLYAMNSIPIPGGLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]2.3e-2347.97Show/hide
Query:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL
        +EALE + W    W+VTS  KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCIM +  V++ ++I   I +W++ P+ A PF   IE L
Subjt:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL

Query:  CVKAVPFLYAMNSIP-IPGGLCN
        C+++   L     I  +  G+CN
Subjt:  CVKAVPFLYAMNSIP-IPGGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2653.33Show/hide
Query:  MAREALEVIVWPGAAWEVTSTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTI
        +A+EAL+V+ WPG   EV     +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCIM KK +NL ++I  +IL+WM +PK+AMPF S +
Subjt:  MAREALEVIVWPGAAWEVTSTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTI

Query:  EALCVKAVPFL--YAMNSIP
        E LC+K +P L  Y   +IP
Subjt:  EALCVKAVPFL--YAMNSIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.1e-2552.42Show/hide
Query:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA
        A++ +++IVWP A    T T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NLG ++  + LSWMR PK+A PF +T++ 
Subjt:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA

Query:  LCVKAV-PFLYAMNSIPIPGGLCN
        LC+K +      +  I + GG CN
Subjt:  LCVKAV-PFLYAMNSIPIPGGLCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase5.4e-2652.42Show/hide
Query:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA
        A++ +++IVWP A    T T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NLG ++  + LSWMR PK+A PF +T++ 
Subjt:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA

Query:  LCVKAV-PFLYAMNSIPIPGGLCN
        LC+K +      +  I + GG CN
Subjt:  LCVKAV-PFLYAMNSIPIPGGLCN

A0A5A7V6M5 Gag/pol protein6.3e-2753.33Show/hide
Query:  MAREALEVIVWPGAAWEVTSTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTI
        +A+EAL+V+ WPG   EV     +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCIM KK +NL ++I  +IL+WM +PK+AMPF S +
Subjt:  MAREALEVIVWPGAAWEVTSTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTI

Query:  EALCVKAVPFL--YAMNSIP
        E LC+K +P L  Y   +IP
Subjt:  EALCVKAVPFL--YAMNSIP

A0A5D3CVL7 Uncharacterized protein5.4e-2652.42Show/hide
Query:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA
        A++ +++IVWP A    T T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NLG ++  + LSWMR PK+A PF +T++ 
Subjt:  AREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEA

Query:  LCVKAV-PFLYAMNSIPIPGGLCN
        LC+K +      +  I + GG CN
Subjt:  LCVKAV-PFLYAMNSIPIPGGLCN

A0A5D3CW17 Uncharacterized protein1.6e-2242.65Show/hide
Query:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL
        ++ALE I+WPG  W+   T KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY        N  ++    +++W++ P  A PFL   + L
Subjt:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL

Query:  CVKAVPFLYAMNSIPIPGGLCNQMALNHTITFHAHK
         +KA P L     + +  G+C    L+  IT H +K
Subjt:  CVKAVPFLYAMNSIPIPGGLCNQMALNHTITFHAHK

A0A5D3DVQ6 Uncharacterized protein1.1e-2347.97Show/hide
Query:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL
        +EALE + W    W+VTS  KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCIM +  V++ ++I   I +W++ P+ A PF   IE L
Subjt:  REALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEAL

Query:  CVKAVPFLYAMNSIP-IPGGLCN
        C+++   L     I  +  G+CN
Subjt:  CVKAVPFLYAMNSIP-IPGGLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTGAAGCGTTGGAAGTAATCGTATGGCCCGGGGCCGCATGGGAAGTAACGTCGACAGGGAAGTATCAACTTTATCCACACCAGCTAACCACAGAGGCGAGCGT
GTGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACCTAGAGTCAGCGATGCTACTCTATTGTATAATGACGAAGAAGCACGTCAACC
TCGGCGATCTGATAGCTACATCCATCCTGTCTTGGATGCGAGTTCCTAAGGACGCCATGCCTTTCCTATCTACAATCGAAGCCCTCTGCGTCAAGGCCGTACCTTTTCTC
TACGCCATGAACTCAATCCCAATTCCAGGCGGTTTGTGTAACCAAATGGCTTTGAATCACACGATCACTTTCCATGCCCACAAAGAAATGGAAAGACGATCAAAGACATT
AGGCGACACAACTGAAGACGTGGCCCAGGCAGAGCGCAAGCGGAAATCCCCAGCCGCCGCATCAACCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTGAAGCGTTGGAAGTAATCGTATGGCCCGGGGCCGCATGGGAAGTAACGTCGACAGGGAAGTATCAACTTTATCCACACCAGCTAACCACAGAGGCGAGCGT
GTGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACCTAGAGTCAGCGATGCTACTCTATTGTATAATGACGAAGAAGCACGTCAACC
TCGGCGATCTGATAGCTACATCCATCCTGTCTTGGATGCGAGTTCCTAAGGACGCCATGCCTTTCCTATCTACAATCGAAGCCCTCTGCGTCAAGGCCGTACCTTTTCTC
TACGCCATGAACTCAATCCCAATTCCAGGCGGTTTGTGTAACCAAATGGCTTTGAATCACACGATCACTTTCCATGCCCACAAAGAAATGGAAAGACGATCAAAGACATT
AGGCGACACAACTGAAGACGTGGCCCAGGCAGAGCGCAAGCGGAAATCCCCAGCCGCCGCATCAACCCCTTAA
Protein sequenceShow/hide protein sequence
MAREALEVIVWPGAAWEVTSTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRVPKDAMPFLSTIEALCVKAVPFL
YAMNSIPIPGGLCNQMALNHTITFHAHKEMERRSKTLGDTTEDVAQAERKRKSPAAASTP