| GenBank top hits | e value | %identity | Alignment |
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| XP_004134991.2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis sativus] | 1.4e-105 | 95 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSK KKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGK AN KAS+ KEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYGVTDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_008440955.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis melo] | 2.4e-105 | 94.55 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGK AN KASV KEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYG+TDSEICVIANVCPDTTDEVFALLPSLK+KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_008440960.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis melo] | 7.2e-102 | 92.73 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSK KKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGK AN KASV KEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYG+TDSEICVIANVCPDTTDEVFALLPSLK+KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_011658103.1 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis sativus] | 4.2e-102 | 93.18 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKD GKDDSLSK KKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGK AN KAS+ KEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYGVTDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_038881037.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Benincasa hispida] | 6.1e-101 | 91.36 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MS+KGEKGF VQKKPAKSSLKSSALKDASLKGKDDSLSK KKGRKVQFDAQGSVDAQ+TFSMKYSGKNGDLGKGGK N KAS KEPQ LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYV++ESVRPVLE LKK+G+T+SEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVL ELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 6.8e-106 | 95 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSK KKGRKVQFDAQGSVDA NTFSMKYSGKNGDLGKGGK AN KAS+ KEPQALELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYGVTDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 1.2e-105 | 94.55 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSK KKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGK AN KASV KEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYG+TDSEICVIANVCPDTTDEVFALLPSLK+KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 3.5e-102 | 92.73 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSK KKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGK AN KASV KEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGK-ANMKASVVKEPQALELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYV+AESVRPVLE LKKYG+TDSEICVIANVCPDTTDEVFALLPSLK+KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A6J1IMM9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 3.1e-95 | 86.76 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGKANMKASVVKEPQALELKIEQELPK
MSEKGEKG + KKP KSSLKSS+ KDASLKGKDDSL KPKKGRKVQFDAQGSVDAQ FSMKYSGKNG+LGKGGK S KEPQ LELKIEQELPK
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGKANMKASVVKEPQALELKIEQELPK
Query: NVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKRS
NVKCQCLMDCEAAQ+LQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYV+ ESVRPVL+ LKKYGV DSE+CV+ANVCPDT DEVFALLPSLKSKRS
Subjt: NVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSKRS
Query: KLSEPLNNVLSELAKVKSS
KLSEPLNNVLSELAKVKSS
Subjt: KLSEPLNNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 4.1e-95 | 87.33 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGKA--NMKASVVKEPQALELKIEQEL
MSEKGEKGF VQKKP KSSLKS A KDASLKGKDDSLSK KKGRKVQFDAQGSVDA SMK+ GKNGDLGKGGK KASV KE Q LELKIEQEL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFDAQGSVDAQNTFSMKYSGKNGDLGKGGKA--NMKASVVKEPQALELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSK
PKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYV+ ESVRPVLE LKKYGV DSEICVIANVCPDT DEVFAL+PSLKSK
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKSK
Query: RSKLSEPLNNVLSELAKVKSS
RSKL+EPLNNVLSELAK+KSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O48890 DNA-directed RNA polymerase II subunit 4 | 3.5e-19 | 38.06 | Show/hide |
Query: KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDT
+E A ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y + ++VR V E L ++ +T+ E+CV+ N+CP+T
Subjt: KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDT
Query: TDEVFALLPSLKSK-RSKLSEPLNNVLSELAKVK
+E A++PSLK+K R+ E + +L++L+ VK
Subjt: TDEVFALLPSLKSK-RSKLSEPLNNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 2.2e-05 | 27.15 | Show/hide |
Query: KASVVKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKK
++ + +E LK ++L K+ K L++ E A LL+ GI + ++ L + I +F + L YA++ + Y + S++ V L K
Subjt: KASVVKEPQALELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKK
Query: YGVTDSEICVIANVCPDTTDEVFALLPSLKSKRSKLSEPLNNVLSELAKVK
+ + EI +AN+CP+ +DE +L+PSLK + L +L EL+ ++
Subjt: YGVTDSEICVIANVCPDTTDEVFALLPSLKSKRSKLSEPLNNVLSELAKVK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 7.8e-35 | 43.75 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFD-----AQGSVDAQNTFSMKYSGKNGDLGKGGKANMKASVVKEPQALELKIE
MSEKG KG KSSLKS KD GKD S +K KKGRK+ FD A + ++ + GK K + + ELK
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKPKKGRKVQFD-----AQGSVDAQNTFSMKYSGKNGDLGKGGKANMKASVVKEPQALELKIE
Query: QELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSL
+LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY + +SVR VLE LK YG++D E+CVIAN ++ DEV A +PSL
Subjt: QELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVDAESVRPVLENLKKYGVTDSEICVIANVCPDTTDEVFALLPSL
Query: KSKRSKLSEPLNNVLSELAKVKSS
K+K+ +++PL + L EL+K+K S
Subjt: KSKRSKLSEPLNNVLSELAKVKSS
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