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PI0006798 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006798
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr04:23633045..23636216
RNA-Seq ExpressionPI0006798
SyntenyPI0006798
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025331.1 transposase [Cucumis melo var. makuwa]4.3e-1986.21Show/hide
Query:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        SV+ALICTQNWLNSDPIDLQ+QHELEEAS FEEGFRVV++NEK LEDL DFDKLSIT+
Subjt:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]9.6e-1976.81Show/hide
Query:  ASAARRRARSNSVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        A ++R      +VEALICTQNWLNSDPI LQ QHELEEAS FEEGFRVVM+NEK LEDL DFDKLSITD
Subjt:  ASAARRRARSNSVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

KAA0041191.1 transposase [Cucumis melo var. makuwa]3.3e-1987.72Show/hide
Query:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        VE LICTQNW+NSDPIDLQ+QHELEEAS FEEGFRVVM+NEK LEDL DFDKLSITD
Subjt:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

KAA0056625.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]5.7e-1987.93Show/hide
Query:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        +VEALICTQNWLNSDPI LQ QHELEEAS FEEGFRVVM+NEK LEDL+DFDKLSITD
Subjt:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

KAA0058833.1 transposase [Cucumis melo var. makuwa]5.7e-1987.72Show/hide
Query:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        VEALICTQNWLNSDPID Q+QHELEEAS FEEGF+VVM+NEK LEDL DFDKLSITD
Subjt:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

TrEMBL top hitse value%identityAlignment
A0A5A7SM58 Transposase2.1e-1986.21Show/hide
Query:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        SV+ALICTQNWLNSDPIDLQ+QHELEEAS FEEGFRVV++NEK LEDL DFDKLSIT+
Subjt:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

A0A5A7THP7 Transposase1.6e-1987.72Show/hide
Query:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        VE LICTQNW+NSDPIDLQ+QHELEEAS FEEGFRVVM+NEK LEDL DFDKLSITD
Subjt:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

A0A5A7U9T4 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.7e-1987.93Show/hide
Query:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        +VEALICTQNWLNSDPI LQ QHELEEAS FEEGFRVVM+NEK LEDL DFDKLSITD
Subjt:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

A0A5A7USD9 Transposase2.7e-1987.72Show/hide
Query:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        VEALICTQNWLNSDPID Q+QHELEEAS FEEGF+VVM+NEK LEDL DFDKLSITD
Subjt:  VEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

A0A5A7USY1 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.7e-1987.93Show/hide
Query:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD
        +VEALICTQNWLNSDPI LQ QHELEEAS FEEGFRVVM+NEK LEDL+DFDKLSITD
Subjt:  SVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEKGLEDLADFDKLSITD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTTCCTACTACTAATACTAAATCTGGTCTCGCTGCAACGACTTTCAATATTCTTTTCACCTCTTCGTTCGGGAACCAAGTTCTCTCTCCCCTATTTACTTTAGG
GGGTTTGAAGTGGAGATTTCATCTTCAGAATAGTAAAGAAAGAGAGACGGATACGGATGCCTCCGCTGCAAGAAGACGGGCCCGATCCAACTCCGTGGAGGCTCTCATAT
GTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAGTTCAACATGAATTGGAAGAGGCTTCAACATTTGAAGAAGGATTTCGGGTGGTTATGGATAATGAAAAG
GGTCTTGAAGACCTTGCAGATTTTGATAAGTTGTCAATTACCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTTCCTACTACTAATACTAAATCTGGTCTCGCTGCAACGACTTTCAATATTCTTTTCACCTCTTCGTTCGGGAACCAAGTTCTCTCTCCCCTATTTACTTTAGG
GGGTTTGAAGTGGAGATTTCATCTTCAGAATAGTAAAGAAAGAGAGACGGATACGGATGCCTCCGCTGCAAGAAGACGGGCCCGATCCAACTCCGTGGAGGCTCTCATAT
GTACTCAAAATTGGCTAAATTCTGATCCAATAGATCTTCAAGTTCAACATGAATTGGAAGAGGCTTCAACATTTGAAGAAGGATTTCGGGTGGTTATGGATAATGAAAAG
GGTCTTGAAGACCTTGCAGATTTTGATAAGTTGTCAATTACCGATTAG
Protein sequenceShow/hide protein sequence
MPLPTTNTKSGLAATTFNILFTSSFGNQVLSPLFTLGGLKWRFHLQNSKERETDTDASAARRRARSNSVEALICTQNWLNSDPIDLQVQHELEEASTFEEGFRVVMDNEK
GLEDLADFDKLSITD