; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006805 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006805
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr07:11069968..11070666
RNA-Seq ExpressionPI0006805
SyntenyPI0006805
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.1e-9071.12Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+GAVT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + S+DKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]1.7e-8769.4Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL++EKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GT+TKVP EFCFTDCYWEWLE VVG++ RLLY  RL+G VTTSLYTYD NSDVVRAF EAWCPSTNTLHTMA ++SISLWDLW   GLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]9.4e-9171.55Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+GAVT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]2.6e-8869.1Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQP+EDGLSL+VEKP A  F D+WP L NNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        G VTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+G VT SLYTYDCNSDVVRAFCEAWCPSTNTLH MA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVCM
        S KEL + SRDKTK LPTTCQYLFQ Y+SIV M
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVCM

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]1.1e-8668.97Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEK  A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY   L+  VT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS  GLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPT CQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein5.2e-8768.97Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEK  A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY   L+  VT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS  GLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPT CQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

A0A5A7TX42 Uncharacterized protein1.0e-9071.12Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+GAVT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + S+DKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

A0A5A7U8L3 PMD domain-containing protein8.0e-8869.4Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL++EKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GT+TKVP EFCFTDCYWEWLE VVG++ RLLY  RL+G VTTSLYTYD NSDVVRAF EAWCPSTNTLHTMA ++SISLWDLW   GLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

A0A5A7VHW8 PMD domain-containing protein4.5e-9171.55Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQPREDGLSL+VEKP A  FAD+WP LDNNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        GTVTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+GAVT SLYTYD NSDVVRAFCEAWCPSTNTLHTMA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC
        S KEL + SRDKTK LPTTCQYLFQ Y+SIVC
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVC

A0A5D3BQ12 PMD domain-containing protein1.2e-8869.1Show/hide
Query:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW
        MVYFT RFL   RHL I SD+NQP+EDGLSL+VEKP A  F D+WP L NNS+LP+LS+                    A N+ RALT G R+IEGQT W
Subjt:  MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSM--------------------ASNADRALTFGHRIIEGQTHW

Query:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP
        G VTKVP EFCFTDCYWEWLE VVG++ RLLY  RL+G VT SLYTYDCNSDVVRAFCEAWCPSTNTLH MA ++SISLWDLWS GGLPIK DFYEE IP
Subjt:  GTVTKVPAEFCFTDCYWEWLEFVVGQSGRLLYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIP

Query:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVCM
        S KEL + SRDKTK LPTTCQYLFQ Y+SIV M
Subjt:  SLKELIA-SRDKTKYLPTTCQYLFQVYHSIVCM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGCACGATTCTTGTTTGAGAATAGACACCTTACAATCTGTTCTGATAAGAATCAACCAAGAGAAGACGGTCTTAGTCTCCTTGTAGAGAAGCCATT
GGCTAGTCCTTTTGCAGATTATTGGCCGAACCTGGACAACAACTCAATTCTTCCCAAATTATCTATGGCTTCTAATGCCGATCGAGCCCTCACTTTCGGACATCGTATAA
TTGAAGGCCAAACCCATTGGGGTACCGTGACTAAAGTCCCAGCAGAGTTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCAAAGTGGACGACTT
CTCTACGATGCTCGTTTATTTGGCGCCGTAACAACTTCTTTGTACACATATGATTGTAACAGCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCGTCAACTAATAC
TCTCCATACCATGGCGAGCGATGTATCCATTTCCTTATGGGACCTGTGGTCATCTGGGGGTCTTCCAATTAAGGCGGATTTCTACGAGGAATGCATCCCTTCCCTTAAAG
AGTTGATTGCTTCGCGAGATAAGACAAAATATCTCCCGACAACATGTCAATATCTATTCCAGGTGTATCATTCAATAGTTTGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGCACGATTCTTGTTTGAGAATAGACACCTTACAATCTGTTCTGATAAGAATCAACCAAGAGAAGACGGTCTTAGTCTCCTTGTAGAGAAGCCATT
GGCTAGTCCTTTTGCAGATTATTGGCCGAACCTGGACAACAACTCAATTCTTCCCAAATTATCTATGGCTTCTAATGCCGATCGAGCCCTCACTTTCGGACATCGTATAA
TTGAAGGCCAAACCCATTGGGGTACCGTGACTAAAGTCCCAGCAGAGTTCTGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTTGTAGTTGGTCAAAGTGGACGACTT
CTCTACGATGCTCGTTTATTTGGCGCCGTAACAACTTCTTTGTACACATATGATTGTAACAGCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCGTCAACTAATAC
TCTCCATACCATGGCGAGCGATGTATCCATTTCCTTATGGGACCTGTGGTCATCTGGGGGTCTTCCAATTAAGGCGGATTTCTACGAGGAATGCATCCCTTCCCTTAAAG
AGTTGATTGCTTCGCGAGATAAGACAAAATATCTCCCGACAACATGTCAATATCTATTCCAGGTGTATCATTCAATAGTTTGCATGTAG
Protein sequenceShow/hide protein sequence
MVYFTARFLFENRHLTICSDKNQPREDGLSLLVEKPLASPFADYWPNLDNNSILPKLSMASNADRALTFGHRIIEGQTHWGTVTKVPAEFCFTDCYWEWLEFVVGQSGRL
LYDARLFGAVTTSLYTYDCNSDVVRAFCEAWCPSTNTLHTMASDVSISLWDLWSSGGLPIKADFYEECIPSLKELIASRDKTKYLPTTCQYLFQVYHSIVCM