; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006813 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006813
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscription factor IBH1
Genome locationchr03:14272776..14274357
RNA-Seq ExpressionPI0006813
SyntenyPI0006813
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3969.39Show/hide
Query:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPDDQ
        SKS  T + STSS LR ARTFLR F+ IKSQ  A + S  P + +R+SRRIKM AYSSMAR AGPR AWARALLF+L+TR R RTLI R RR   R DD+
Subjt:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPDDQ

Query:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST
        VGKLRRL+PGGE+MDVCTLLEET  YI CLS QVKVMKAI DH  ST
Subjt:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4371.14Show/hide
Query:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKR--RPSTRPD
        S+S  T +NS+SS LR ARTFLR FSRIKS+R  T AS    + +R+SRRIK+AAYSSMARVAGP+RAWARALLF+L TR R  TL+RR+R   PS  PD
Subjt:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKR--RPSTRPD

Query:  DQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST
        D VGKLRRLLPGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLST
Subjt:  DQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]4.4e-6692.11Show/hide
Query:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP
        M NSKSAITLLNSTSSR RFARTFLRLFSRIKSQRSAT ASAPPDQ KRQS+RIKM AYSSMARVAGPRRAWARALLF+LQTRPR RTL+RRKRRPST P
Subjt:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD HLST N
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]2.2e-4169.39Show/hide
Query:  KSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRK--RRPSTRPDD
        +S IT +NS+SS LR ARTFLR FSRIKS+R  T AS    + +R+SRRIK+AAYSSMARVAGP+R WARALLF+L TR R RT +RR+    PS  PDD
Subjt:  KSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRK--RRPSTRPDD

Query:  QVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLS
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLS
Subjt:  QVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLS

XP_023548405.1 transcription factor IBH1 [Cucurbita pepo subsp. pepo]5.1e-3868.03Show/hide
Query:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPDDQ
        SKS  T + STS+ LR ARTFLR F+ IKSQ  A + S  P + KRQSRRIKM AYSSMAR AGPR AWARALLF+L+ R R RTLI R RR     DD+
Subjt:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPDDQ

Query:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST
        VGKLRRL+PGGE MDVC+LLEET  YI CL TQVKVMKAI DH  ST
Subjt:  VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLST

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein2.9e-5582.89Show/hide
Query:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP
        MANSKSAITLLNSTSSRL FART            SAT ASAPPDQ KRQSRRIKMAAYSSMARVAG RRAWARALLFRL TRPR +TL+RRKRRPST  
Subjt:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN
        DD VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAIS+HHLS  N
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN

A0A1S3CLD3 transcription factor IBH12.1e-6692.11Show/hide
Query:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP
        M NSKSAITLLNSTSSR RFARTFLRLFSRIKSQRSAT ASAPPDQ KRQS+RIKM AYSSMARVAGPRRAWARALLF+LQTRPR RTL+RRKRRPST P
Subjt:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD HLST N
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN

A0A2P6QV70 Uncharacterized protein3.4e-2448.05Show/hide
Query:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPD--
        + S IT L++ S R++FAR FLR  + IK Q+ ++ AS+  ++  ++S+RIKMAAYSSMAR  GPR  W+RALLF+L+ R     L+++K+R + R +  
Subjt:  SKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPD--

Query:  ---------DQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDH
                 D+  KLR+L+PGG++MD   LLEETA+YI CL+TQVKVM+AI+D+
Subjt:  ---------DQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDH

A0A5D3BPL2 Transcription factor IBH12.1e-6692.11Show/hide
Query:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP
        M NSKSAITLLNSTSSR RFARTFLRLFSRIKSQRSAT ASAPPDQ KRQS+RIKM AYSSMARVAGPRRAWARALLF+LQTRPR RTL+RRKRRPST P
Subjt:  MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD HLST N
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN

A0A6J1KS83 transcription factor IBH11.1e-4169.39Show/hide
Query:  KSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRK--RRPSTRPDD
        +S IT +NS+SS LR ARTFLR FSRIKS+R  T AS    + +R+SRRIK+AAYSSMARVAGP+R WARALLF+L TR R RT +RR+    PS  PDD
Subjt:  KSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRK--RRPSTRPDD

Query:  QVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLS
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLS
Subjt:  QVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLS

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH19.4e-1137.27Show/hide
Query:  FLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRR-----KRR----PSTRPDDQVG---------
        FLR  SRI      T          R++R I+ AAYSSMAR A PRRAW+RALL + + R R RTL+RR     +RR    P+  P    G         
Subjt:  FLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRR-----KRR----PSTRPDDQVG---------

Query:  ---------------------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
                              LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ + D
Subjt:  ---------------------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

Q7XR02 Transcription factor IBH15.5e-1137.27Show/hide
Query:  FLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRR-----KRR----PSTRPDDQVG---------
        FLR  SRI      T          R++R I+ AAYSSMAR A PRRAW+RALL +++ R R RTL+RR     +RR    P+  P    G         
Subjt:  FLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRR-----KRR----PSTRPDDQVG---------

Query:  ---------------------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
                              LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ + D
Subjt:  ---------------------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

Q9SKX1 Transcription factor IBH16.5e-1241.3Show/hide
Query:  FARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVA-GPRRAWARALLFR-------LQTRPRQRTLIRRKRRPSTR----PDDQVGKL
        FA  FL+  S ++ Q         PDQ   + R+IK AAY SMAR A G  R W+RALL R       +    R++  I  KRR S +     ++   +L
Subjt:  FARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVA-GPRRAWARALLFR-------LQTRPRQRTLIRRKRRPSTR----PDDQVGKL

Query:  RRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
        R L+PGG  M+   L+EETA+YI CLS QVKVM+ + D
Subjt:  RRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 14.6e-1341.3Show/hide
Query:  FARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVA-GPRRAWARALLFR-------LQTRPRQRTLIRRKRRPSTR----PDDQVGKL
        FA  FL+  S ++ Q         PDQ   + R+IK AAY SMAR A G  R W+RALL R       +    R++  I  KRR S +     ++   +L
Subjt:  FARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVA-GPRRAWARALLFR-------LQTRPRQRTLIRRKRRPSTR----PDDQVGKL

Query:  RRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
        R L+PGG  M+   L+EETA+YI CLS QVKVM+ + D
Subjt:  RRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators3.9e-0435.63Show/hide
Query:  AWARALLFRLQTRPRQRTL-------IRRKRRPSTRPDDQVG-------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
        AW+R LL +L +     T        IR   RP     ++ G       +L++LLPGGE M+V  +L E  NYI CL  Q   +K+I
Subjt:  AWARALLFRLQTRPRQRTL-------IRRKRRPSTRPDDQVG-------KLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGGCTCCGTTTCGCTCGAACGTTCCTCCGATTGTTCTCCCGGATCAAATCCCAAAGATCCGC
CACCGTTGCCTCCGCTCCTCCAGATCAGTTCAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCGGGGCCAAGGCGAGCTTGGGCTA
GAGCCCTTCTCTTCAGGCTCCAGACGCGACCCAGACAGAGGACTTTAATTAGAAGAAAAAGAAGACCCTCGACTCGCCCTGATGACCAGGTCGGTAAGCTCCGACGCCTG
CTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATCTGATCATCA
CTTGTCAACGGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAACCCATTTGATTCCAAAAGGCCAAAATTCCCCATAGCCATCCAATTTCAATCCCTTATTCCTTCTTCCCTATTGCTTGATTCCTTCCCCTATTTGCTTCTTCCTT
ATTTCTCTCTCTTGAATTATTTCCAATTTAGAGAGAGAAATTCTGTGTGTTCTTAAGCTTTGATAGTGTTTGTGTAATCAATCAAATTATTATACTCTGTGCTTCAACTG
ATCAAGATTTTGCCTTAATTTTGTCCTCCCAAGCTAAGAGGTCCCTCTGTGTCAGTCCCAAAAAAAAAAAAAAAAAAAAAAATCTCAACTTCCAAACCTTCATTCTTCCA
TTTGTCTCTCTCTCTTCCAAAAGATATGTTGTGTCAGAGTTAGTTGTACTAGGAATTCAAGATCCTTCCCTCTCTCTCTCTCTCTAAATATTATAAATCTTTCCCTCTCC
ATTTTATCCATGGCTAATTCTAAATCAGCTATAACCCTATTGAATTCCACTTCATCCCGGCTCCGTTTCGCTCGAACGTTCCTCCGATTGTTCTCCCGGATCAAATCCCA
AAGATCCGCCACCGTTGCCTCCGCTCCTCCAGATCAGTTCAAACGCCAGAGTCGACGGATAAAAATGGCTGCATACTCTTCCATGGCTCGGGTTGCGGGGCCAAGGCGAG
CTTGGGCTAGAGCCCTTCTCTTCAGGCTCCAGACGCGACCCAGACAGAGGACTTTAATTAGAAGAAAAAGAAGACCCTCGACTCGCCCTGATGACCAGGTCGGTAAGCTC
CGACGCCTGCTCCCCGGTGGTGAGACCATGGACGTGTGCACGTTGTTGGAGGAAACTGCGAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATATC
TGATCATCACTTGTCAACGGCCAATTGATCCAAATCTTCTTCAAAAATTTCTCATTATTAACACAGATCATATAATATATATATATATCTATATATATCTATATATATCC
AAACACAAAGCTTAAATTATACACAACATACAGCAAAAGCAGAAAAGAGAGAGATTTAATTCATATGATAATATCGGTTTGTAGCCTTTAATTTTTTTTTCCATGCATAT
AAGAAGAAAATTATATAGAGATTTTAGAACACTATAAGTATATATATAATACTTGTGCATGCATTGGGGTGGTAATTCTTGCATAAATCCATTGTTTTTATACTCTTATT
TGCTTTTTTTTTTTTTTTTTAATTTTAAAAATGTATTTGTTTGTGTGTGTATAACCATACTTTTTTTTATACCTTTTTTCCTCTATTTCTCTCTATTTTTGTCTCTCTTG
ATAAGCAGCTTTGGAAATCTCTGCAGAAGAAGGAAAAACTGTGAGTTTTTGTATATGAATTTTTATAGTTTCTGTTTTTATGATTGCACTTTTAAAAATTTTGTGATGGA
TTTTTTTTAATATTGAAACATTAGATATAAACTAGTTGTGGCAAGCTTGTTTAGTTATGAGATTATAAGATTTTATTTTTCGCAATGATATGCTTTTTCTTACTTATATT
AAGAGATTTTGAACATCGCATATAAGATCCATTTCAATCTTG
Protein sequenceShow/hide protein sequence
MANSKSAITLLNSTSSRLRFARTFLRLFSRIKSQRSATVASAPPDQFKRQSRRIKMAAYSSMARVAGPRRAWARALLFRLQTRPRQRTLIRRKRRPSTRPDDQVGKLRRL
LPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDHHLSTAN