; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006821 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006821
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptioncleavage and polyadenylation specificity factor subunit 6-like
Genome locationchr01:13454821..13455498
RNA-Seq ExpressionPI0006821
SyntenyPI0006821
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR034772 - CPSF6/7 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07956.1 cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa]4.6e-10493.83Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK
        SKEKD GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYRDREPEH+EDWERGRSSRT  HSK
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK

Query:  SRLSQEEENRSRSRDADYGKRRRLTSE
        SRLSQEEE+RSRSRDADYGKRRRLTSE
Subjt:  SRLSQEEENRSRSRDADYGKRRRLTSE

TYK07958.1 putative PE-PGRS family protein PE_PGRS54 [Cucumis melo var. makuwa]9.9e-10796Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDR SERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEKD GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHH+RDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDW+RGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSRSRDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

XP_022159356.1 cleavage and polyadenylation specificity factor subunit 6-like [Momordica charantia]4.9e-10694.67Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSE+HGGGR GESSYGEEAGSDQQYGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEK+ GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHHDRDR+RDRDRDRDRYKEDR+RYSDHHRYRDREPEHE++WERGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSR+RDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

XP_031744545.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus]2.4e-10594.22Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEKD GPD DWPDRRPR+DRDIGRERDKDR+R+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSDHHRYRDREPEH+EDWERGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSRSRDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

XP_038897335.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida]7.6e-10796Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGR  ESSYGEEAGSDQQYGEGSH+RG WANS KEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEKD GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSR+RDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

TrEMBL top hitse value%identityAlignment
A0A0A0K306 Uncharacterized protein6.5e-10493.39Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK
        SKEKD GPD DWPDRRPR+DRDIGRERDK+R+RDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DRDRYSDHHRYRDREPEH+EDWERGRSSRT  HSK
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK

Query:  SRLSQEEENRSRSRDADYGKRRRLTSE
        SRLSQEEE+RSRSRDADYGKRRRLTSE
Subjt:  SRLSQEEENRSRSRDADYGKRRRLTSE

A0A0A0K3G6 RRM domain-containing protein1.2e-10594.22Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEKD GPD DWPDRRPR+DRDIGRERDKDR+R+RDRERSRDYERGHH+RDRER+RDRDRDRYK+DRD+YSDHHRYRDREPEH+EDWERGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSRSRDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

A0A5D3C9W4 Putative PE-PGRS family protein PE_PGRS544.8e-10796Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDR SERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEKD GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHH+RDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDW+RGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSRSRDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

A0A5D3CC60 Cleavage and polyadenylation specificity factor subunit 62.2e-10493.83Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEE GGGR GESSYGEEAGSDQ YGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK
        SKEKD GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHH+RDRER+RDRDRDRYK+DR+RYSDHHRYRDREPEH+EDWERGRSSRT  HSK
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRT--HSK

Query:  SRLSQEEENRSRSRDADYGKRRRLTSE
        SRLSQEEE+RSRSRDADYGKRRRLTSE
Subjt:  SRLSQEEENRSRSRDADYGKRRRLTSE

A0A6J1E3N9 cleavage and polyadenylation specificity factor subunit 6-like2.4e-10694.67Show/hide
Query:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
        MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSE+HGGGR GESSYGEEAGSDQQYGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER
Subjt:  MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRER

Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR
        SKEK+ GPD DWPDRRPRDDRDIGRERDKDR+RDRDRERSRDYERGHHDRDR+RDRDRDRDRYKEDR+RYSDHHRYRDREPEHE++WERGRSSRTHSKSR
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR

Query:  LSQEEENRSRSRDADYGKRRRLTSE
        LSQEEENRSR+RDADYGKRRRLTSE
Subjt:  LSQEEENRSRSRDADYGKRRRLTSE

SwissProt top hitse value%identityAlignment
Q2QZL4 Splicing factor U2af large subunit B4.3e-0443.75Show/hide
Query:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGH-HDRDRERDRDRDRDRY-------KEDRDRYSDHHRYRDREPEHEEDWERGRS
        S+E  L   +D  DR    D+D  R RD+DR+R RDR+R +D E+    +RDR+RDRD+DRDR+       +E RDR  DH R+R R+ E   D ER   
Subjt:  SKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGH-HDRDRERDRDRDRDRY-------KEDRDRYSDHHRYRDREPEHEEDWERGRS

Query:  SRTHSKSR-LSQEEENRSRSRDADYGKR
         R  S+SR  S+  + RSRSR     KR
Subjt:  SRTHSKSR-LSQEEENRSRSRDADYGKR

Q551H4 Serine/threonine-protein kinase fray23.9e-0541.56Show/hide
Query:  ANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKE
        +NS ++++R  +RD    S++ Y++ R     R+R +E+D        DR    +RD  RERD+DR RDR R+RSRD ER    RDR RDRDR RDR ++
Subjt:  ANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKE

Query:  ---DRDRYSDHHRYRDREPEHEEDWERGRS---SRTHSKSRLSQEEENRSRSRD
           +RDR     R RDR    + D  R RS   SR+HS  R S+  ++R++SRD
Subjt:  ---DRDRYSDHHRYRDREPEHEEDWERGRS---SRTHSKSRLSQEEENRSRSRD

Q5T200 Zinc finger CCCH domain-containing protein 139.6e-0436.94Show/hide
Query:  KEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRD---DRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKED
        +  +R  ERD  +  DR    +R+   DRER KE++L  ++     R R+   DR+  R+RD DRER+R+RER R+ ER     +RER+R+R+R+R +E 
Subjt:  KEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRD---DRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKED

Query:  RDRYSDHHRYRDREPEHEEDWE---RGRSSRTHSKSRLSQEEENRSRSRDADYGKRR
        R+R  +  R RD+E E + DWE   +GR  R   +  + +E+ N     D    K+R
Subjt:  RDRYSDHHRYRDREPEHEEDWE---RGRSSRTHSKSRLSQEEENRSRSRDADYGKRR

Arabidopsis top hitse value%identityAlignment
AT1G60900.1 U2 snRNP auxilliary factor, large subunit, splicing factor7.6e-0436.2Show/hide
Query:  SHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDR
        S E  P+   +K ++     D  + S +    D + G D++ +K++D   D+D    R RD       R+K R+RDRDRERS+D +R  H RDR RDR R
Subjt:  SHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDR

Query:  DRDRYKEDRDRYSDHH-RYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRR
        +R   ++D D   DHH R RDR+     D +R    R  S+SR     E RSRS      + R
Subjt:  DRDRYKEDRDRYSDHH-RYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRR

AT5G53440.1 unknown protein2.0e-0438.71Show/hide
Query:  KDRGSERDWSQSSDRRYRDDRDV-GY-DRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERS---RDYERG-HHDRDRERDRDRDRDRYKE
        +D   ++   Q +D  +  D ++ GY +RER+++ D   D++  DR    DRD   ERD+DR+RDRDRER    RDYE   +HDRD +RDR RDRDR   
Subjt:  KDRGSERDWSQSSDRRYRDDRDV-GY-DRERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERS---RDYERG-HHDRDRERDRDRDRDRYKE

Query:  DRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR-LSQEEENRSRSRDADYGKR
        D +R   H R +DR  ++  D +R +S R     R +S+ ++   R +D   G+R
Subjt:  DRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSR-LSQEEENRSRSRDADYGKR

AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-5562.72Show/hide
Query:  MPMNGMGMMPTSGVD-GPNMGMWSDPSMGGWGS-EEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDR
        MPMNGMGMMP +GVD G NMGMW DP+ GGWG+ E+ G GR  ESSYGEEA SD QYGE +HERG   N  KEK+R SER+WS SSDRR R+D+D GY+R
Subjt:  MPMNGMGMMPTSGVD-GPNMGMWSDPSMGGWGS-EEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDR

Query:  ERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHS
        +  +EKD+G   D P+RR RDDRD GRER+++    +DRERSR+     H RDRE  R+R+RDR++E+R+RY   HR R R EPEH+E+W RGRSSR H+
Subjt:  ERSKEKDLGPDQDWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHS

Query:  KSRLSQEEENRSRSRDADYGKRRRLTSE
        KSRLS+E+ +RS+SRD DYGKRRRLT+E
Subjt:  KSRLSQEEENRSRSRDADYGKRRRLTSE

AT5G55670.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-4357.41Show/hide
Query:  NMGMWSDPSMGGWG------SEEHG-GGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQ
        N G  +   MGG G      +  +G GGR  ESSYGEEA SD QYGE +HERG   N  KEK+R SER+WS SSDRR R+D+D GY+R+  +EKD+G   
Subjt:  NMGMWSDPSMGGWG------SEEHG-GGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQ

Query:  DWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHSKSRLSQEEENRS
        D P+RR RDDRD GRER+++    +DRERSR+     H RDRE  R+R+RDR++E+R+RY   HR R R EPEH+E+W RGRSSR H+KSRLS+E+ +RS
Subjt:  DWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDR-EPEHEEDWERGRSSRTHSKSRLSQEEENRS

Query:  RSRDADYGKRRRLTSE
        +SRD DYGKRRRLT+E
Subjt:  RSRDADYGKRRRLTSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATGAATGGAATGGGGATGATGCCAACATCAGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAGCATGGTGG
AGGGAGAGTTGGCGAGTCTAGTTATGGAGAAGAAGCTGGTTCTGATCAGCAATATGGCGAAGGTAGTCATGAAAGAGGGCCGTGGGCAAATTCTGCAAAGGAGAAAGATA
GAGGCTCTGAAAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAGAGGTCAAAAGAAAAAGATCTGGGGCCTGACCAG
GATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGAACGGGATAGGGATAGAGAACGATCCCGAGATTATGAGCGTGGCCA
TCATGATCGTGATCGTGAACGTGACAGGGATCGTGACCGAGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGATACAGAGATCGGGAACCAGAGCATG
AGGAGGATTGGGAAAGGGGACGGTCGTCAAGGACTCATAGCAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGG
AGGCTTACTTCTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTATGAATGGAATGGGGATGATGCCAACATCAGGTGTTGATGGGCCTAATATGGGAATGTGGTCTGATCCTAGTATGGGTGGATGGGGCAGTGAAGAGCATGGTGG
AGGGAGAGTTGGCGAGTCTAGTTATGGAGAAGAAGCTGGTTCTGATCAGCAATATGGCGAAGGTAGTCATGAAAGAGGGCCGTGGGCAAATTCTGCAAAGGAGAAAGATA
GAGGCTCTGAAAGGGACTGGTCACAGTCTTCTGATAGAAGGTATCGAGATGATAGAGATGTTGGATATGATAGAGAGAGGTCAAAAGAAAAAGATCTGGGGCCTGACCAG
GATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGTGAAAGGGATAAAGATAGGGAACGGGATAGGGATAGAGAACGATCCCGAGATTATGAGCGTGGCCA
TCATGATCGTGATCGTGAACGTGACAGGGATCGTGACCGAGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCATAGATACAGAGATCGGGAACCAGAGCATG
AGGAGGATTGGGAAAGGGGACGGTCGTCAAGGACTCATAGCAAGTCCCGATTATCACAAGAAGAAGAAAATCGTTCTAGATCAAGGGATGCTGATTATGGGAAGAGGCGG
AGGCTTACTTCTGAATAG
Protein sequenceShow/hide protein sequence
MPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEHGGGRVGESSYGEEAGSDQQYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDLGPDQ
DWPDRRPRDDRDIGRERDKDRERDRDRERSRDYERGHHDRDRERDRDRDRDRYKEDRDRYSDHHRYRDREPEHEEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRR
RLTSE