; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006832 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006832
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:9901526..9901777
RNA-Seq ExpressionPI0006832
SyntenyPI0006832
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]6.2e-1455.38Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNF
        M   QVN A  S  +  ++D++GC+  GSPH   ACPLN E +A+V++DP+SNTYNP WRNHPNF
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNF

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]3.4e-2058.02Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQ
        M ++QVNV   SVH    + +M CVGC   +NT  CP NT+ I + +NDP+SNTYN GWRNH NF WGGTGQ NQGR G Q
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQ

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]6.0e-1758.82Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG
        M + +VN A   VH   ++ ++GCVGCG PHNT  CP NTET+A+V+NDP+ NTYN GWRNH NF WG
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]1.0e-1667.74Show/hide
Query:  MGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQGD
        MGCVG G PHNT  CPLNTE +A+V+NDP+SNTYN GWR HPNF WGG    NQGR G  G+
Subjt:  MGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQGD

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]1.1e-1360.94Show/hide
Query:  QVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG
        QVN AG  VHA  ++ ++GCVGC  PHNT ACP N E  A V+    SNTYN GWRNHPNF WG
Subjt:  QVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein1.6e-2058.02Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQ
        M ++QVNV   SVH    + +M CVGC   +NT  CP NT+ I + +NDP+SNTYN GWRNH NF WGGTGQ NQGR G Q
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQ

A0A5A7VE68 Uncharacterized protein2.9e-1758.82Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG
        M + +VN A   VH   ++ ++GCVGCG PHNT  CP NTET+A+V+NDP+ NTYN GWRNH NF WG
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG

A0A5D3BYZ5 Uncharacterized protein5.0e-1767.74Show/hide
Query:  MGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQGD
        MGCVG G PHNT  CPLNTE +A+V+NDP+SNTYN GWR HPNF WGG    NQGR G  G+
Subjt:  MGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQGD

A0A5D3CGY4 Uncharacterized protein5.1e-1460.94Show/hide
Query:  QVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG
        QVN AG  VHA  ++ ++GCVGC  PHNT ACP N E  A V+    SNTYN GWRNHPNF WG
Subjt:  QVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWG

A0A5D3CSC7 Uncharacterized protein3.0e-1455.38Show/hide
Query:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNF
        M   QVN A  S  +  ++D++GC+  GSPH   ACPLN E +A+V++DP+SNTYNP WRNHPNF
Subjt:  MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTCAATGTCGCAGGAGGCTCTGTGCATGCGTCAAATAAAATTGATGATATGGGATGTGTGGGATGCGGCAGTCCTCATAATACTGGCGCATGCCC
ACTCAATACAGAAACTATCGCATTCGTAAGGAACGACCCTTTTTCCAACACTTACAACCCTGGTTGGAGGAACCATCCTAACTTTGGATGGGGAGGAACGGGTCAACAAA
ATCAAGGGCGACATGGTGGTCAAGGTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTCAATGTCGCAGGAGGCTCTGTGCATGCGTCAAATAAAATTGATGATATGGGATGTGTGGGATGCGGCAGTCCTCATAATACTGGCGCATGCCC
ACTCAATACAGAAACTATCGCATTCGTAAGGAACGACCCTTTTTCCAACACTTACAACCCTGGTTGGAGGAACCATCCTAACTTTGGATGGGGAGGAACGGGTCAACAAA
ATCAAGGGCGACATGGTGGTCAAGGTGACTGA
Protein sequenceShow/hide protein sequence
MAISQVNVAGGSVHASNKIDDMGCVGCGSPHNTGACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGTGQQNQGRHGGQGD