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PI0006867 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006867
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionclassical arabinogalactan protein 26
Genome locationchr01:24443931..24444711
RNA-Seq ExpressionPI0006867
SyntenyPI0006867
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4885.61Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS
        M SIFSLYIPIFMAYTASI PFSFASYPN+FP  LISSISAAPEF  SP+P+PASDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPL 
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS

Query:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
        PSQSLPFSA A LNSGGWCWS+ VALT A+ A
Subjt:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
XP_008451434.1 PREDICTED: classical arabinogalactan protein 26 [Cucumis melo]7.1e-4984.96Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL
        M SIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPEFSPAPAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD +PAPEMPL
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL

Query:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
        SP+ S+PFSA AALNS GWC SV +AL TALAA
Subjt:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
XP_011659314.1 classical arabinogalactan protein 26 [Cucumis sativus]2.1e-5391.54Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLSPS
        M SIFSLYIPIFMAYTAS+FPFSFASYPN FPTHLISSISAAPEFSP+PAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPLSPS
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLSPS

Query:  QSLPFSATAALNSGGWCWSVLVALTTALAA
        QSLPFS  AALNSGGWC SV VALTT L A
Subjt:  QSLPFSATAALNSGGWCWSVLVALTTALAA
XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]1.3e-4784.85Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS
        M SIFSLYIPIFMAYTASI PFSFASYPN+FP  LISSISAAPEF  SP+P+PASDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPL 
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS

Query:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
        PSQSLPFSA A LNSGGWCWS+ VALT A+ A
Subjt:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]3.2e-4987.12Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS
        M SIFSLYIPIFMAYTASIFPFSFASYPN+FP  LISSISAAPEF  SP+P+PASDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPL 
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS

Query:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
        PSQSLPFSATA LNSGGWCWS+ VALT A+ A
Subjt:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
TrEMBL top hitse value%identityAlignment
A0A0A0K510 Uncharacterized protein1.0e-5391.54Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLSPS
        M SIFSLYIPIFMAYTAS+FPFSFASYPN FPTHLISSISAAPEFSP+PAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPLSPS
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLSPS

Query:  QSLPFSATAALNSGGWCWSVLVALTTALAA
        QSLPFS  AALNSGGWC SV VALTT L A
Subjt:  QSLPFSATAALNSGGWCWSVLVALTTALAA
A0A1S3BRG9 classical arabinogalactan protein 263.5e-4984.96Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL
        M SIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPEFSPAPAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD +PAPEMPL
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL

Query:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
        SP+ S+PFSA AALNS GWC SV +AL TALAA
Subjt:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
A0A5A7UQZ3 Classical arabinogalactan protein 263.5e-4984.96Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL
        M SIFSLYIPIFMAYTAS FPF+FASYPNYFPTH   + SSISAAPEFSPAPAP+SDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMD +PAPEMPL
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTH---LISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPL

Query:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
        SP+ S+PFSA AALNS GWC SV +AL TALAA
Subjt:  SPSQSLPFSATAALNSGGWCWSVLVALTTALAA
A0A6J1GPB2 classical arabinogalactan protein 266.5e-4884.85Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS
        M SIFSLYIPIFMAYTASI PFSFASYPN+FP  LISSISAAPEF  SP+P+PASDI+PLFPTPG ATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPL 
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS

Query:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
        PSQSLPFSA A LNSGGWCWS+ VALT A+ A
Subjt:  PSQSLPFSATAALNSGGWCWSVLVALTTALAA
A0A6J1JX46 classical arabinogalactan protein 268.5e-4886.15Show/hide
Query:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS
        M SIFSLYIPIFMAYTASIF FSFASYPN+FP  LISSISAAPEF  SP+P+PASDISPLFPTPG ATLPPSSLPTIPSSPSPPNPDFMDA+PAPEMPL 
Subjt:  MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEF--SPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLS

Query:  PSQSLPFSATAALNSGGWCWSVLVALTTAL
        PSQSLPFSA A LNSGGWCWS+ VALT A+
Subjt:  PSQSLPFSATAALNSGGWCWSVLVALTTAL
SwissProt top hitse value%identityAlignment
Q94F57 Classical arabinogalactan protein 262.9e-0544.04Show/hide
Query:  ISSISAAPEFSP---------APAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDASPAPEMPLSPSQS-LPFSATAALNSGGWCWSV
        +S+ISAAP F P          PA + D SPLFPTPG + + PS      +PTIPSS SPPNPD +  +P P + +SP  S LP S++  L S      +
Subjt:  ISSISAAPEFSP---------APAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDASPAPEMPLSPSQS-LPFSATAALNSGGWCWSV

Query:  LVALTTALA
        LV L   LA
Subjt:  LVALTTALA
Arabidopsis top hitse value%identityAlignment
AT2G47930.1 arabinogalactan protein 262.1e-0644.04Show/hide
Query:  ISSISAAPEFSP---------APAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDASPAPEMPLSPSQS-LPFSATAALNSGGWCWSV
        +S+ISAAP F P          PA + D SPLFPTPG + + PS      +PTIPSS SPPNPD +  +P P + +SP  S LP S++  L S      +
Subjt:  ISSISAAPEFSP---------APAPASDISPLFPTPGDATLPPSS-----LPTIPSSPSPPNPDFMDASPAPEMPLSPSQS-LPFSATAALNSGGWCWSV

Query:  LVALTTALA
        LV L   LA
Subjt:  LVALTTALA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCCATTTTCTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCATTTTCCCTTTCTCTTTTGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTC
TTCCATATCCGCCGCGCCGGAATTTTCTCCAGCACCGGCGCCGGCGTCGGACATTTCTCCACTCTTTCCGACTCCTGGCGACGCTACCCTTCCGCCGTCCTCCTTGCCTA
CCATACCCTCCAGTCCCAGCCCTCCAAACCCCGATTTTATGGACGCTTCGCCGGCGCCGGAGATGCCTCTTTCGCCGTCTCAGTCCTTGCCATTCTCTGCCACTGCTGCT
CTTAACTCCGGTGGGTGGTGTTGGTCGGTTTTGGTGGCTCTTACGACGGCTCTAGCGGCGTAA
mRNA sequenceShow/hide mRNA sequence
CCTTTGGGTTTTTTCTTCTCTTCTTTCATTCTTTCTTCTTCCTCTCAATTTCTCTACTTTTTTTAGAAAAATTAAATCTCTCTCTCATCATTGAAAATGCTTTCCATTTT
CTCTCTCTACATTCCCATTTTCATGGCCTACACAGCTTCCATTTTCCCTTTCTCTTTTGCTTCTTATCCCAATTACTTCCCTACCCACCTCATTTCTTCCATATCCGCCG
CGCCGGAATTTTCTCCAGCACCGGCGCCGGCGTCGGACATTTCTCCACTCTTTCCGACTCCTGGCGACGCTACCCTTCCGCCGTCCTCCTTGCCTACCATACCCTCCAGT
CCCAGCCCTCCAAACCCCGATTTTATGGACGCTTCGCCGGCGCCGGAGATGCCTCTTTCGCCGTCTCAGTCCTTGCCATTCTCTGCCACTGCTGCTCTTAACTCCGGTGG
GTGGTGTTGGTCGGTTTTGGTGGCTCTTACGACGGCTCTAGCGGCGTAACTCCGCCAGTGACGAGTGAGCCACCGTTGCTCGGATTTTAGTGGACATTGGAGTGTAGTTA
TGTTTATGGCAAGAGTAATTCTCTTATCTTTTATTTTTGTGTTTTCTTGTTACTATATATATGTATATTTAATTTTTGGATTTGAGTCAATCTTTTTTTATTCCATAATT
TGGGTCTTTTTGGGGAAAGAAAATTGAATTATTCTTTGAATGTTGAATGAAAATTAAAGAAAAAATTAATATGTTACGGTAGAGAAGTTTGACAAGGTTGAAAAATGAGA
GAAAAAAAATC
Protein sequenceShow/hide protein sequence
MLSIFSLYIPIFMAYTASIFPFSFASYPNYFPTHLISSISAAPEFSPAPAPASDISPLFPTPGDATLPPSSLPTIPSSPSPPNPDFMDASPAPEMPLSPSQSLPFSATAA
LNSGGWCWSVLVALTTALAA