; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006878 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006878
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L6
Genome locationchr01:3214676..3217525
RNA-Seq ExpressionPI0006878
SyntenyPI0006878
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572299.1 50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.3e-11389.27Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   SLI   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV +TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA LEGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_004144493.1 50S ribosomal protein L6, chloroplastic [Cucumis sativus]2.4e-12496.57Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPP+ IHSPNNFRSTFLGEKNGFCVSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VT+TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRA +EGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]2.0e-12698.28Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVT+TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRA +EGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_022952947.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita moschata]5.6e-11389.7Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   SLI   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV +TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA LEGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

XP_038888704.1 50S ribosomal protein L6, chloroplastic [Benincasa hispida]4.8e-12092.7Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS PSLQPPSL+H+ NNFRSTFLGE+NGF VSAMPVCHIG+LRKTIECKESRIGKQPI VPSNVT++LQGQDLKVKGPLGELSILYPRE+KIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA LEGKDLVLNLGFSHPV+MAIPDGIQ+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K3K9 Uncharacterized protein1.2e-12496.57Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPP+ IHSPNNFRSTFLGEKNGFCVSAMP CHIGLLRKTIECKESRIGKQPIQVPS+VT+TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRA +EGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A1S3C0W5 50S ribosomal protein L6, chloroplastic9.6e-12798.28Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVT+TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GII+VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRA +EGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic5.7e-11192.56Show/hide
Query:  NNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNV + LQGQDLKVKGPLGELSILYPREVKIEREDSGI++VKKA+ETRRA QMH
Subjt:  NNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMH

Query:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRA LEGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like2.7e-11389.7Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   SLI   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV +TLQGQDLKVKGPLGELSILYPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA LEGKDLVLNLGFSHPVRMAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1HVU0 50S ribosomal protein L6, chloroplastic-like3.9e-11288.84Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA+SS P L   SLI   NNFRSTFLGEKNGF +S MPV H G+LRKTIECKESRIGKQPIQVPSNV +TLQGQDLKVKGPLGELSI+YPREVKIEREDS
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        GI++VKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRA LEGKDLVLNLGFSHPV MAIP+G+Q+KVEENTRITVSGYDKCAIGQFAAS
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L69.8e-5258.66Show/hide
Query:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG
        SRIGK PI +P  V VT++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A Q HGL RTL  NMV GVSKGFEKKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+Q+ VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B1WQS5 50S ribosomal protein L62.4e-5054.19Show/hide
Query:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG
        SRIGK+PI +P+ VT+ ++GQ + VKGP G L +  P EV + +E    ++V++  ++R A + HGLFRTL  NM+ GVS+GFEK+L + GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P GI + VE NT++ VSG DK  +G  AA IR  RPPEPYKGKG++Y DE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B7KI01 50S ribosomal protein L62.4e-5055.31Show/hide
Query:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG
        SRIGK+PI +P+ VTV + G  + VKGP GEL    P  V +E +D G+++V +  ++R A Q HGL RTL  NMV GVSKGFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEG

Query:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P GI + VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  E+VRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic4.7e-9472.96Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVT+ L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        G ++VKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRAT++GK+LVLNLGFSHPV+M IPD +++KVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic7.4e-9274.07Show/hide
Query:  PNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQM
        P++ +S FLG K     S +PV  IG  RK+++CKESRIGKQPI VP+NV + ++GQDLKVKGPLGELSI YPREV +E+++SG ++V+KA+ETRRANQM
Subjt:  PNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALETRRANQM

Query:  HGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY
        HGLFRTLTDNMVVGVSKGFEKKLQL+GVGYRAT+EGKDL+L+LGFSHPVRMAIPD +Q+KVEENT++TVSG DK  +GQFAA+IR WRPPEPYKGKGV+Y
Subjt:  HGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKY

Query:  ADEIVRRKEGKAGKKK
         DE+VRRKEGKAGKKK
Subjt:  ADEIVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family3.3e-9572.96Show/hide
Query:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS
        MA S   S QP          RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVT+ L+GQDLKVKGPLGEL++ YPREV++ +E+S
Subjt:  MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDS

Query:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS
        G ++VKK +ETRRANQMHGLFRTLTDNMVVGVSKGFEKKL L+GVGYRAT++GK+LVLNLGFSHPV+M IPD +++KVEENTRITVSGYDK  IGQFAA+
Subjt:  GIIKVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAAS

Query:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK
        +R+WRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  IRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein1.6e-2044.9Show/hide
Query:  FEKKLQLIGVGYRATLE--GKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        F + L+++GVGY+A  E  G+ L L LG+SH V +A+P  +++   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DE+V++K+GK  K
Subjt:  FEKKLQLIGVGYRATLE--GKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTCTCTTCTCCTCCTTCTCTTCAACCTCCAAGTTTGATACACTCACCTAACAACTTTCGGTCTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAAT
GCCTGTATGTCATATTGGTCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTAACCGTCACATTGCAGGGTC
AGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAAGTCAAGATTGAGAGGGAAGATTCTGGGATCATAAAAGTTAAGAAAGCACTGGAA
ACAAGAAGAGCCAATCAAATGCATGGACTTTTCAGGACACTTACGGACAACATGGTGGTAGGAGTATCGAAGGGGTTCGAAAAGAAACTTCAATTGATTGGTGTTGGTTA
TCGAGCGACGTTAGAAGGAAAAGACTTGGTATTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCCATACCTGATGGAATTCAGATAAAAGTGGAAGAAAACACAAGAA
TTACAGTGAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCGCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCGGATGAA
ATTGTAAGAAGAAAGGAAGGAAAAGCAGGGAAGAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTGCAACTCACTGTGTCATCTTCTTCGTAATCGGACCCAAAGGGGGTCTCTTTCGTTCTTTCACATTTGGGTCTTCTGTTCTCAGACTCATAATGGCACTCTCTTCTCCT
CCTTCTCTTCAACCTCCAAGTTTGATACACTCACCTAACAACTTTCGGTCTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAATGCCTGTATGTCATATTGG
TCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTAACCGTCACATTGCAGGGTCAGGATTTGAAAGTTAAGG
GTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAAGTCAAGATTGAGAGGGAAGATTCTGGGATCATAAAAGTTAAGAAAGCACTGGAAACAAGAAGAGCCAATCAA
ATGCATGGACTTTTCAGGACACTTACGGACAACATGGTGGTAGGAGTATCGAAGGGGTTCGAAAAGAAACTTCAATTGATTGGTGTTGGTTATCGAGCGACGTTAGAAGG
AAAAGACTTGGTATTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCCATACCTGATGGAATTCAGATAAAAGTGGAAGAAAACACAAGAATTACAGTGAGTGGATATG
ATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAATGGAGACCGCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCGGATGAAATTGTAAGAAGAAAGGAA
GGAAAAGCAGGGAAGAAGAAGTAATGGGTTGTAATTCATTGTTTGTTTTTATTCTCTCTTTTGAAGTGTTTGTATTTTTTTTCTATTATCAGAAAGGATTATTGTCACAT
AACTGTTTGACTTCCTTTTCTTTGTCCGTTGAATGTGAAAATTTGCTAGAATTCACACAGT
Protein sequenceShow/hide protein sequence
MALSSPPSLQPPSLIHSPNNFRSTFLGEKNGFCVSAMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTVTLQGQDLKVKGPLGELSILYPREVKIEREDSGIIKVKKALE
TRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRATLEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADE
IVRRKEGKAGKKK