; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006880 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006880
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLa-related protein 6C
Genome locationchr11:26798732..26801731
RNA-Seq ExpressionPI0006880
SyntenyPI0006880
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005844 - polysome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR006630 - La-type HTH domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034878 - Plant La-related protein, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153773.2 la-related protein 6C [Cucumis sativus]2.5e-22896.69Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MAQLNPEEKFSENHS ME NQEAIINS+ DGSSNSSLANLAFRFNAQAPEFFPRTQ QMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN NFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG
        NRKSEFDS+LDEDDSPSPVSVEESPLQNINDL VDCNSEENSTS KKSWGRGRGKGRGRIHG+LDRSYSLPVTSSLQTSGQVL EASSKLTTKSP+MPDG
Subjt:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG

Query:  TKGFTMGRGKALSSKPLFNRLVD
        TKGFTMGRGK LSSKPL NRLVD
Subjt:  TKGFTMGRGKALSSKPLFNRLVD

XP_008459218.1 PREDICTED: la-related protein 6C [Cucumis melo]7.8e-23096.93Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MAQLNPEEKFSENHS MEVNQEAI NSD DGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN NFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFET +LAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG
        NRKSEFDS+LDEDDSPS VSVEE+PLQNINDLIVDCN EENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSP+MPDG
Subjt:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG

Query:  TKGFTMGRGKALSSK-PLFNRLVD
        TKGFTMGRGK LSSK PLFNRLVD
Subjt:  TKGFTMGRGKALSSK-PLFNRLVD

XP_022148536.1 la-related protein 6C [Momordica charantia]3.9e-18980.99Show/hide
Query:  MAQLNPEEKFSEN---HSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPN
        MAQ N EEK SE     +   VN     + DGDG SNSS  NL F+FNAQAPEFFPR+Q Q+PVTGYFHPYFHFLGG PA+SDWFFIGDQEPAYLIPN  
Subjt:  MAQLNPEEKFSEN---HSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPN

Query:  IQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKD
        I LPNFSK+ RS++IQQKIVKQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTN N IVQALRSSSRLVVSSDGK+VRRK PFTDKD
Subjt:  IQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKD

Query:  KEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKS
        KEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELAERA E+LNDERNWRKGLRVR L+RRSPKS
Subjt:  KEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKS

Query:  VLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKM
        VLK RKSEFDSILDEDDSPSPVS+EE  L NI +LIVDCNSEENST+SKK WGRGRGKGRGRIH H DR  S+PVT  +Q S QV+CEAS+KLT+KSP+M
Subjt:  VLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKM

Query:  PDGTKGFTMGRGKALSSKPLFNRLVD
        PDGTKGFTMGRGK LSSKP+FNRLV+
Subjt:  PDGTKGFTMGRGKALSSKPLFNRLVD

XP_023007490.1 la-related protein 6C [Cucurbita maxima]6.3e-18780.91Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MA+ N EEK +EN   MEV +   +N DG GSSNS+  NL+F+FNAQAPEFFPR+Q QMPVTGYFHPYFHFLGG PA+SDWFFIGDQEP YLIPNP I L
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSK+ARSE+IQQKIVKQVEYQ SDMSLLANE+LAK+ISKDPDGYVPIS++SSTKKVKSLSTN N IVQALRSSS+LVVS+DGK+V+RK PFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELA+RA E+LNDERNWRKGLRVR L+RRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVE-ESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD
         RKSEF+SILDEDDSPSPVS+E ESP  NI +LI D +SEENSTSSKK WGRGRGKGRGR+H HLDRSYSLPVT ++Q+S Q+LCEASSKLT+KSP+MPD
Subjt:  NRKSEFDSILDEDDSPSPVSVE-ESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD

Query:  GTKGFTMGRGKALSSKPLF
        GTKGFTMGRGK L+SK +F
Subjt:  GTKGFTMGRGKALSSKPLF

XP_038900552.1 la-related protein 6C [Benincasa hispida]6.4e-20888.44Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQ-PQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQ
        MAQ N E+K SEN   MEV +E II  DGDGSSNS++ANLAFRFNAQAPEFFPRTQ  QMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQ
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQ-PQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQ

Query:  LPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKE
        LPNFSKHARSEEIQQKI+KQVEYQLSDMSLLANETL+KHISKDPDGYV ISILS+TKKVKSLSTN +FIVQALRSSSRLVVS+DGK+VRRKVPFTDKD+E
Subjt:  LPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKE

Query:  ELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVL
        ELL+R+VVAENLPENHSHHNLEKIFSVVGSVKTIRICHPP+SNPCCSKGEL +SNKLHALVE+E+ ELAERA+E+LNDERNWRKGLRVR ++RRSPKSVL
Subjt:  ELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVL

Query:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD
        K RKSEFDSILD+DDSPSPVSVEES L NI+DLIVDCNSEENSTSSKKSWGRGRGKGRGRIH HLDRSYSLPVTSSLQTSGQVLCEASSKLT+KSP+MPD
Subjt:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD

Query:  GTKGFTMGRGKALSSKPLFNRLVD
        GTKGFTMGRG+  SSKPLFNRLVD
Subjt:  GTKGFTMGRGKALSSKPLFNRLVD

TrEMBL top hitse value%identityAlignment
A0A0A0LIU3 Uncharacterized protein1.1e-22491.7Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MAQLNPEEKFSENHS ME NQEAIINS+ DGSSNSSLANLAFRFNAQAPEFFPRTQ QMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRL----------------------
        PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN NFIVQALRSSSRL                      
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRL----------------------

Query:  -VVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND
         VVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND
Subjt:  -VVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND

Query:  ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQ
        ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDS+LDEDDSPSPVSVEESPLQNINDL VDCNSEENSTS KKSWGRGRGKGRGRIHG+LDRSYSLPVTSSLQ
Subjt:  ERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQ

Query:  TSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGKALSSKPLFNRLVD
        TSGQVL EASSKLTTKSP+MPDGTKGFTMGRGK LSSKPL NRLVD
Subjt:  TSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGKALSSKPLFNRLVD

A0A1S4E2C7 la-related protein 6C3.8e-23096.93Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MAQLNPEEKFSENHS MEVNQEAI NSD DGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN NFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFET +LAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG
        NRKSEFDS+LDEDDSPS VSVEE+PLQNINDLIVDCN EENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSP+MPDG
Subjt:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG

Query:  TKGFTMGRGKALSSK-PLFNRLVD
        TKGFTMGRGK LSSK PLFNRLVD
Subjt:  TKGFTMGRGKALSSK-PLFNRLVD

A0A5A7TV41 La-related protein 6C3.8e-23096.93Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MAQLNPEEKFSENHS MEVNQEAI NSD DGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTN NFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFET +LAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG
        NRKSEFDS+LDEDDSPS VSVEE+PLQNINDLIVDCN EENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSP+MPDG
Subjt:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDG

Query:  TKGFTMGRGKALSSK-PLFNRLVD
        TKGFTMGRGK LSSK PLFNRLVD
Subjt:  TKGFTMGRGKALSSK-PLFNRLVD

A0A6J1D5P1 la-related protein 6C1.9e-18980.99Show/hide
Query:  MAQLNPEEKFSEN---HSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPN
        MAQ N EEK SE     +   VN     + DGDG SNSS  NL F+FNAQAPEFFPR+Q Q+PVTGYFHPYFHFLGG PA+SDWFFIGDQEPAYLIPN  
Subjt:  MAQLNPEEKFSEN---HSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPN

Query:  IQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKD
        I LPNFSK+ RS++IQQKIVKQVEYQ SDMSLLANE+LAKHISKDPDGYVPIS++SSTKKVKSLSTN N IVQALRSSSRLVVSSDGK+VRRK PFTDKD
Subjt:  IQLPNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKD

Query:  KEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKS
        KEELL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELAERA E+LNDERNWRKGLRVR L+RRSPKS
Subjt:  KEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKS

Query:  VLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKM
        VLK RKSEFDSILDEDDSPSPVS+EE  L NI +LIVDCNSEENST+SKK WGRGRGKGRGRIH H DR  S+PVT  +Q S QV+CEAS+KLT+KSP+M
Subjt:  VLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKM

Query:  PDGTKGFTMGRGKALSSKPLFNRLVD
        PDGTKGFTMGRGK LSSKP+FNRLV+
Subjt:  PDGTKGFTMGRGKALSSKPLFNRLVD

A0A6J1L340 la-related protein 6C3.0e-18780.91Show/hide
Query:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL
        MA+ N EEK +EN   MEV +   +N DG GSSNS+  NL+F+FNAQAPEFFPR+Q QMPVTGYFHPYFHFLGG PA+SDWFFIGDQEP YLIPNP I L
Subjt:  MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQL

Query:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE
        PNFSK+ARSE+IQQKIVKQVEYQ SDMSLLANE+LAK+ISKDPDGYVPIS++SSTKKVKSLSTN N IVQALRSSS+LVVS+DGK+V+RK PFTDKDKEE
Subjt:  PNFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEE

Query:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK
        LL+RTVV ENLP+NHSHHNLEKIFSV+GSVKTIRICHPPESNPCCSKGELF+SNKLHALVE+ET ELA+RA E+LNDERNWRKGLRVR L+RRSPKSVLK
Subjt:  LLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVE-ESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD
         RKSEF+SILDEDDSPSPVS+E ESP  NI +LI D +SEENSTSSKK WGRGRGKGRGR+H HLDRSYSLPVT ++Q+S Q+LCEASSKLT+KSP+MPD
Subjt:  NRKSEFDSILDEDDSPSPVSVE-ESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD

Query:  GTKGFTMGRGKALSSKPLF
        GTKGFTMGRGK L+SK +F
Subjt:  GTKGFTMGRGKALSSKPLF

SwissProt top hitse value%identityAlignment
O80567 La-related protein 6B3.4e-5037.33Show/hide
Query:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA
        SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  N + +   L++S++L VS DGK+VRR  P T+   EEL +
Subjt:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA

Query:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR--
        R +VAENLPE+H + NL KIFS VGSVK IR C P  +         +   S G LF SNK+HA VE+E  ELAERA+ +L++  NWR GL+VR +++  
Subjt:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR--

Query:  -RSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR----------------
         + PK      +   D+ ++ ++  +  S E+ P++  +D   DC+ E                E +   +K   RGRGKGRGR                
Subjt:  -RSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR----------------

Query:  -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK
          H H  R        + +    S      +      K     P+MPDGT+GF+MGRGK
Subjt:  -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK

Q05CL8 La-related protein 74.7e-2038.15Show/hide
Query:  KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLAR
        K +R +++   I KQV++   D +L  ++ L + I K  DGYV IS+L S  K+K L+T+   I +AL+SSS + +  +G R+RRK P  ++ K+E   R
Subjt:  KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLAR

Query:  TVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND
        TV  E LP+N +H  +E++F   G+V  I I H   +             K  A VEFET E A +AIE LN+
Subjt:  TVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND

Q5XI01 La-related protein 76.2e-2038.15Show/hide
Query:  KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLAR
        K +R +++   I KQV++   D +L  +  L + I K  DGYV IS+L S  K+K L+T+   I +AL+SSS + +  +G R+RRK P  ++ K+E   R
Subjt:  KHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLAR

Query:  TVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND
        TV  E LP+N +H  +E++F   G+V  I I H   +             K  A VEFET E A +AIE LN+
Subjt:  TVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLND

Q94A38 La-related protein 6A2.0e-3934.82Show/hide
Query:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE
        +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV AL+ SS LVVS+D K+V+R  P  +    ++   TV+ E
Subjt:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE

Query:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPL--------VRRSPKSVL
        NLPE+HS+ N+ +IF   GS+K++ IC P   E +    K E F+  +LHA VE+ET E AE+A   LN+E++WR GLRV+ L         RR  +  +
Subjt:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPL--------VRRSPKSVL

Query:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD
           K     + D+          E     ++      + +  +    K+  +GR  G+GR   H   +     T+S  +         SK     P+MPD
Subjt:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD

Query:  GTKGFTMGRGKAL
        GT+GFTMGRGKA+
Subjt:  GTKGFTMGRGKAL

Q9LHL3 La-related protein 6C1.9e-10651.16Show/hide
Query:  DGDGSSNSSLANLAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFHFLGG-----------------GPASSDWFFIGDQEP------------AYL
        DG G S+ + A  AF+FNAQAPEF PR+      PQ+ PV+GYF+P FH+ GG                 G  SSDW ++G  +P            A+ 
Subjt:  DGDGSSNSSLANLAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFHFLGG-----------------GPASSDWFFIGDQEP------------AYL

Query:  IPNPNIQLP------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKR
        I NP +Q P      + SK+  S++++ KIVKQVEYQ +DMSLLANE+++KHISKDP+GYVP+S ++STKK+K+L++N++ +  ALRSSS+LVVS DGK+
Subjt:  IPNPNIQLP------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKR

Query:  VRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLR
        V+R   FTD+D+EEL  RTVVAENLP++HS+ NLEKIF VVG+VK IRICHPPESN    KG+  +SNK+HAL+E++   +A++A+E+LNDERNWRKGLR
Subjt:  VRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLR

Query:  VRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQ
        VR L+R SPKSVLKNR++ FD IL +D+ PS  S E+SP  ++ +  +D + ++N+      WG+GRGKGRGR       G   RS+ + +  SL     
Subjt:  VRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQ

Query:  VLCEASS-KLTTKSPKMPDGTKGFTMGRGK
           E+SS K  TK P+MPDGT+GFTMGRGK
Subjt:  VLCEASS-KLTTKSPKMPDGTKGFTMGRGK

Arabidopsis top hitse value%identityAlignment
AT2G43970.1 RNA-binding protein2.4e-5137.33Show/hide
Query:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA
        SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  N + +   L++S++L VS DGK+VRR  P T+   EEL +
Subjt:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA

Query:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR--
        R +VAENLPE+H + NL KIFS VGSVK IR C P  +         +   S G LF SNK+HA VE+E  ELAERA+ +L++  NWR GL+VR +++  
Subjt:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPES---------NPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR--

Query:  -RSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR----------------
         + PK      +   D+ ++ ++  +  S E+ P++  +D   DC+ E                E +   +K   RGRGKGRGR                
Subjt:  -RSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR----------------

Query:  -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK
          H H  R        + +    S      +      K     P+MPDGT+GF+MGRGK
Subjt:  -IHGHLDRS-------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK

AT2G43970.2 RNA-binding protein5.9e-4234Show/hide
Query:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA
        SK    E+  QKIV QVEY  SD++L   + L + I KDP+GYVPI +++S KK+K++  N + +   L++S++L VS DGK+VRR  P T+   EEL +
Subjt:  SKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLA

Query:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR---RSPKSVLK
        R +VAENLPE+H + NL KIFS VGSVK IR C P  +           +     L   +  EL+E          NWR GL+VR +++   + PK    
Subjt:  RTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVR---RSPKSVLK

Query:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR-----------------IHGHLDRS
          +   D+ ++ ++  +  S E+ P++  +D   DC+ E                E +   +K   RGRGKGRGR                  H H  R 
Subjt:  NRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSE----------------ENSTSSKKSWGRGRGKGRGR-----------------IHGHLDRS

Query:  -------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK
               + +    S      +      K     P+MPDGT+GF+MGRGK
Subjt:  -------YSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGK

AT3G19090.1 RNA-binding protein1.4e-10751.16Show/hide
Query:  DGDGSSNSSLANLAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFHFLGG-----------------GPASSDWFFIGDQEP------------AYL
        DG G S+ + A  AF+FNAQAPEF PR+      PQ+ PV+GYF+P FH+ GG                 G  SSDW ++G  +P            A+ 
Subjt:  DGDGSSNSSLANLAFRFNAQAPEFFPRTQ-----PQM-PVTGYFHPYFHFLGG-----------------GPASSDWFFIGDQEP------------AYL

Query:  IPNPNIQLP------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKR
        I NP +Q P      + SK+  S++++ KIVKQVEYQ +DMSLLANE+++KHISKDP+GYVP+S ++STKK+K+L++N++ +  ALRSSS+LVVS DGK+
Subjt:  IPNPNIQLP------NFSKHARSEEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKR

Query:  VRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLR
        V+R   FTD+D+EEL  RTVVAENLP++HS+ NLEKIF VVG+VK IRICHPPESN    KG+  +SNK+HAL+E++   +A++A+E+LNDERNWRKGLR
Subjt:  VRRKVPFTDKDKEELLARTVVAENLPENHSHHNLEKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLR

Query:  VRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQ
        VR L+R SPKSVLKNR++ FD IL +D+ PS  S E+SP  ++ +  +D + ++N+      WG+GRGKGRGR       G   RS+ + +  SL     
Subjt:  VRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGR-----IHGHLDRSYSLPVTSSLQTSGQ

Query:  VLCEASS-KLTTKSPKMPDGTKGFTMGRGK
           E+SS K  TK P+MPDGT+GFTMGRGK
Subjt:  VLCEASS-KLTTKSPKMPDGTKGFTMGRGK

AT5G46250.1 RNA-binding protein1.5e-4034.82Show/hide
Query:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE
        +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV AL+ SS LVVS+D K+V+R  P  +    ++   TV+ E
Subjt:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE

Query:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPL--------VRRSPKSVL
        NLPE+HS+ N+ +IF   GS+K++ IC P   E +    K E F+  +LHA VE+ET E AE+A   LN+E++WR GLRV+ L         RR  +  +
Subjt:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPL--------VRRSPKSVL

Query:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD
           K     + D+          E     ++      + +  +    K+  +GR  G+GR   H   +     T+S  +         SK     P+MPD
Subjt:  KNRKSEFDSILDEDDSPSPVSVEESPLQNINDLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPD

Query:  GTKGFTMGRGKAL
        GT+GFTMGRGKA+
Subjt:  GTKGFTMGRGKAL

AT5G46250.3 RNA-binding protein9.1e-3541.8Show/hide
Query:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE
        +E+ QKI++QVEY  SD +L  ++ L   + ++  G+VPIS +++  K+K L+ ++  IV AL+ SS LVVS+D K+V+R  P  +    ++   TV+ E
Subjt:  EEIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAE

Query:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPK
        NLPE+HS+ N+ +IF   GS+K++ IC P   E +    K E F+  +LHA VE+ET E AE+A+  LN+E++WR GLRV+ L + + K
Subjt:  NLPENHSHHNLEKIFSVVGSVKTIRICHP--PESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAACTGAATCCAGAAGAGAAGTTTAGTGAAAACCACTCTGCAATGGAGGTCAATCAAGAAGCTATCATCAATAGCGATGGCGATGGAAGTAGTAATAGCAGTCT
TGCTAATTTGGCCTTCAGATTTAATGCTCAAGCGCCTGAGTTTTTCCCTAGAACGCAACCCCAGATGCCTGTTACTGGTTATTTTCATCCCTATTTTCATTTTCTTGGTG
GGGGCCCTGCTTCTTCAGATTGGTTCTTTATTGGGGACCAAGAACCTGCTTATTTGATCCCTAATCCCAACATTCAGCTCCCTAATTTCTCTAAGCATGCTCGTTCTGAA
GAGATTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGCTTAGTGACATGAGTCTTCTTGCAAATGAGACGCTTGCAAAACACATTAGTAAAGATCCCGATGGTTATGT
TCCGATTTCTATTCTCTCATCGACAAAAAAAGTGAAGTCTCTCTCAACCAACTACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTGTCAGTTCTGATG
GGAAGAGAGTTAGGCGTAAGGTTCCTTTCACAGACAAGGACAAAGAGGAATTGCTGGCCCGCACAGTTGTTGCTGAGAATTTGCCTGAAAATCACTCGCATCACAATCTG
GAGAAAATATTCAGTGTTGTTGGAAGTGTGAAAACCATCCGAATCTGCCACCCCCCGGAATCGAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAGTAACAAGCTTCA
TGCACTCGTGGAGTTTGAGACAGCAGAGTTAGCTGAAAGAGCGATTGAGCAGTTAAACGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGCCACTGGTGAGACGCT
CGCCAAAATCTGTGCTGAAGAATCGAAAATCAGAATTCGACAGCATTTTGGATGAAGATGATTCACCATCTCCTGTATCCGTTGAAGAGTCGCCACTGCAAAATATCAAT
GACCTGATTGTCGATTGCAATTCTGAAGAGAACTCTACATCATCGAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGCCGTGGACGAATTCATGGCCATCTCGATCGTAG
CTATAGCTTGCCGGTTACATCATCTCTGCAGACGAGTGGGCAGGTTTTGTGTGAAGCATCTTCCAAACTGACTACAAAGAGTCCAAAAATGCCTGATGGGACTAAAGGTT
TCACCATGGGAAGAGGCAAGGCATTAAGCTCTAAACCTCTATTCAATAGGCTTGTTGACTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGTGAGATTTCAATAACCCACCTGCATTTCAAGCCCTACTTCCATTAATCGCAGGAATTAAAAAAA
AGGGATTAAAGCATGGCGCAACTGAATCCAGAAGAGAAGTTTAGTGAAAACCACTCTGCAATGGAGGTCAATCAAGAAGCTATCATCAATAGCGATGGCGATGGAAGTAG
TAATAGCAGTCTTGCTAATTTGGCCTTCAGATTTAATGCTCAAGCGCCTGAGTTTTTCCCTAGAACGCAACCCCAGATGCCTGTTACTGGTTATTTTCATCCCTATTTTC
ATTTTCTTGGTGGGGGCCCTGCTTCTTCAGATTGGTTCTTTATTGGGGACCAAGAACCTGCTTATTTGATCCCTAATCCCAACATTCAGCTCCCTAATTTCTCTAAGCAT
GCTCGTTCTGAAGAGATTCAGCAAAAAATCGTCAAACAGGTAGAATATCAGCTTAGTGACATGAGTCTTCTTGCAAATGAGACGCTTGCAAAACACATTAGTAAAGATCC
CGATGGTTATGTTCCGATTTCTATTCTCTCATCGACAAAAAAAGTGAAGTCTCTCTCAACCAACTACAATTTCATAGTTCAAGCACTCCGCTCCTCTTCAAGGCTTGTTG
TCAGTTCTGATGGGAAGAGAGTTAGGCGTAAGGTTCCTTTCACAGACAAGGACAAAGAGGAATTGCTGGCCCGCACAGTTGTTGCTGAGAATTTGCCTGAAAATCACTCG
CATCACAATCTGGAGAAAATATTCAGTGTTGTTGGAAGTGTGAAAACCATCCGAATCTGCCACCCCCCGGAATCGAATCCCTGCTGCTCTAAAGGTGAATTGTTTGTCAG
TAACAAGCTTCATGCACTCGTGGAGTTTGAGACAGCAGAGTTAGCTGAAAGAGCGATTGAGCAGTTAAACGATGAGAGAAACTGGAGGAAAGGACTCCGAGTAAGGCCAC
TGGTGAGACGCTCGCCAAAATCTGTGCTGAAGAATCGAAAATCAGAATTCGACAGCATTTTGGATGAAGATGATTCACCATCTCCTGTATCCGTTGAAGAGTCGCCACTG
CAAAATATCAATGACCTGATTGTCGATTGCAATTCTGAAGAGAACTCTACATCATCGAAGAAGAGCTGGGGTCGAGGACGTGGGAAGGGCCGTGGACGAATTCATGGCCA
TCTCGATCGTAGCTATAGCTTGCCGGTTACATCATCTCTGCAGACGAGTGGGCAGGTTTTGTGTGAAGCATCTTCCAAACTGACTACAAAGAGTCCAAAAATGCCTGATG
GGACTAAAGGTTTCACCATGGGAAGAGGCAAGGCATTAAGCTCTAAACCTCTATTCAATAGGCTTGTTGACTGATAGAAGAAATGTAAGGAAATCTCTGTTTGATTTATT
GAGTAGGGTGGAAGGAACTATAACAATTCTTTTTATGAGACTATTCACAATTTTGCTGCTACATTTTATTTCAATTTATGTATTATTTTTTAAAATTTTGGTAATAATGG
AGATGTTTGATAGGGTTTTGGTTACTGTA
Protein sequenceShow/hide protein sequence
MAQLNPEEKFSENHSAMEVNQEAIINSDGDGSSNSSLANLAFRFNAQAPEFFPRTQPQMPVTGYFHPYFHFLGGGPASSDWFFIGDQEPAYLIPNPNIQLPNFSKHARSE
EIQQKIVKQVEYQLSDMSLLANETLAKHISKDPDGYVPISILSSTKKVKSLSTNYNFIVQALRSSSRLVVSSDGKRVRRKVPFTDKDKEELLARTVVAENLPENHSHHNL
EKIFSVVGSVKTIRICHPPESNPCCSKGELFVSNKLHALVEFETAELAERAIEQLNDERNWRKGLRVRPLVRRSPKSVLKNRKSEFDSILDEDDSPSPVSVEESPLQNIN
DLIVDCNSEENSTSSKKSWGRGRGKGRGRIHGHLDRSYSLPVTSSLQTSGQVLCEASSKLTTKSPKMPDGTKGFTMGRGKALSSKPLFNRLVD