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PI0006883 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006883
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPlant transposase
Genome locationchr04:11553036..11553866
RNA-Seq ExpressionPI0006883
SyntenyPI0006883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]7.0e-2970.75Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]5.4e-2971.43Show/hide
Query:  SSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PTP
        +SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PTP
Subjt:  SSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PTP

Query:  ILNSP
        I+NSP
Subjt:  ILNSP

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]2.0e-2869.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVAS LKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

TYK22660.1 Plant transposase [Cucumis melo var. makuwa]2.7e-2869.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD GYVRGLGFGV  SKV TSI KDKTI  LERKC+NLTSDVDELKSVVAS LKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

TYK28558.1 Plant transposase [Cucumis melo var. makuwa]2.7e-2869.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV G D GYVRGLGFGVT SKV TSI KDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase3.4e-2970.75Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

A0A5A7TLJ2 Plant transposase2.6e-2971.43Show/hide
Query:  SSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PTP
        +SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PTP
Subjt:  SSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PTP

Query:  ILNSP
        I+NSP
Subjt:  ILNSP

A0A5A7UVF2 Plant transposase9.9e-2969.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD  YVRGLGFGVT SKV TSIQKDKTI  LE+KC+NLTSDVDELKSVVAS LKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

A0A5D3DH39 Plant transposase1.3e-2869.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV GPD GYVRGLGFGV  SKV TSI KDKTI  LERKC+NLTSDVDELKSVVAS LKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

A0A5D3DYN2 Plant transposase1.3e-2869.81Show/hide
Query:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT
        ++SSSS+I+DAISRV G D GYVRGLGFGVT SKV TSI KDKTI  LE+KC+NLTSDVDELKSVVASLLKDKEK  D  +++   RVP+S  I    PT
Subjt:  MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRI----PT

Query:  PILNSP
        PI+NSP
Subjt:  PILNSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTAC
ATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGG
AAAAAATAATTGATCAACAAAATTCGAATAATCCGGTTAGAGTACCAACATCGCCACGTATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGACATGTGGAAAAAA
CATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTAC
ATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGG
AAAAAATAATTGATCAACAAAATTCGAATAATCCGGTTAGAGTACCAACATCGCCACGTATTCCTACTCCAATCCTAAATTCCCCACAGGTGATTGACATGTGGAAAAAA
CATTGA
Protein sequenceShow/hide protein sequence
MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLERKCNNLTSDVDELKSVVASLLKDKEKIIDQQNSNNPVRVPTSPRIPTPILNSPQVIDMWKK
H