; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006887 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006887
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription termination factor MTEF1
Genome locationchr08:17845610..17848159
RNA-Seq ExpressionPI0006887
SyntenyPI0006887
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025223.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]8.1e-17197.12Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI+HSSPSPLFPSLPR RT+HFPVLSNSRTSFIFPSKLPPR  TIPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTS ASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

KAE8647430.1 hypothetical protein Csa_003511 [Cucumis sativus]8.6e-17396.54Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPRSRT+HFPVLSNSRTSFIFPSKLPPRN  IPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTS AS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEPWEWE
        LKSSEMKFREKLE WEWE
Subjt:  LKSSEMKFREKLEPWEWE

XP_011657726.1 transcription factor E2FA isoform X1 [Cucumis sativus]1.5e-16996.81Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPRSRT+HFPVLSNSRTSFIFPSKLPPRN  IPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTS AS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

XP_016902903.1 PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]5.4e-17597.17Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI+HSSPSPLFPSLPR RT+HFPVLSNSRTSFIFPSKLPPR  TIPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTS ASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEPWEWE
        LKSSEMKFREKLEPWEWE
Subjt:  LKSSEMKFREKLEPWEWE

XP_038883667.1 transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida]2.5e-17295.61Show/hide
Query:  MAD-SSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDH
        MAD SSLHLLSNGGFI HSSPSPLFPSLPRSRT+HFPVLSNSR +F+FPSKLPPRN TI PLSPPLPP PPH DHHSDFQEKMLFLDSIGIDFLSVIKDH
Subjt:  MAD-SSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDH

Query:  PPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
        PPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDL+PIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK
Subjt:  PPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK

Query:  HTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
        HTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE
Subjt:  HTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPE

Query:  LLKSSEMKFREKLEPWEWE
        LLK+SEMKFR+KLEPWEWE
Subjt:  LLKSSEMKFREKLEPWEWE

TrEMBL top hitse value%identityAlignment
A0A0A0KKL6 Uncharacterized protein5.2e-13983.71Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI HSSPSPLFPSLPRSRT+HFPVLSNSRTSFIFPSKLPPRN  IPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFT LE RRIVGMCPEILTS AS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISE    
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
                                              LFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

A0A1S4E3U8 transcription termination factor MTEF1, chloroplastic2.6e-17597.17Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI+HSSPSPLFPSLPR RT+HFPVLSNSRTSFIFPSKLPPR  TIPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTS ASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEPWEWE
        LKSSEMKFREKLEPWEWE
Subjt:  LKSSEMKFREKLEPWEWE

A0A5A7SKM3 Transcription termination factor MTEF13.9e-17197.12Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        MADSSLHLLSNGGFI+HSSPSPLFPSLPR RT+HFPVLSNSRTSFIFPSKLPPR  TIPPLS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE+LTS ASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD+LRPTLYFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLE
        LKSSEMKFREKLE
Subjt:  LKSSEMKFREKLE

A0A6J1HHJ6 transcription termination factor MTEF1, chloroplastic5.3e-15286.08Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+ HSSPS LFPSL RSRT+ FP + N++ +FI PSKLP R   IPPLSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTS  SD++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+RLRPT+YFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEPWE
        LK+SEMKFREKLEPWE
Subjt:  LKSSEMKFREKLEPWE

A0A6J1IAF5 transcription termination factor MTEF1, chloroplastic6.7e-15586.71Show/hide
Query:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP
        M D++LHLLSNGGF+ HSSPS LFPSL RSRT+ FP++SN++T+FI PSKLP R   IPPLSPPLPP P H+   S+FQEKMLFLDSIGIDFLSVIKDHP
Subjt:  MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHP

Query:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH
        PVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTS  SD++P+FTFLLREARVDGSDIKRVINRRPRLLACSVK+RLRPT+YFLQSIGISEVHKH
Subjt:  PVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKH

Query:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
        TSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPLP L
Subjt:  TSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL

Query:  LKSSEMKFREKLEPWE
        LK+SEMKFREKLEPWE
Subjt:  LKSSEMKFREKLEPWE

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic1.5e-1532.93Show/hide
Query:  LREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIK
        L+E  +    I  ++ + P LL  S+  ++RP + FL +  G+++      +    +LL CS+  KL P + ++ +LG        M   FP L  Y++ 
Subjt:  LREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQS-IGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIK

Query:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        +NL PK  Y    M R L++L EFP +FS+SLE RI PRH   VE  V F L  +L  ++ +F  ++
Subjt:  ENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

F4JVI3 Transcription termination factor MTERF5, chloroplastic9.1e-2430.34Show/hide
Query:  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK
        FL  +GI   D  +++   P +   SL D ++  + F+ ++     ++ +I+   P ILT     L     FL +    +   I R++ R P +++ SV+
Subjt:  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVK

Query:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS
        D+LRPT+ + +S+ +     +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF   M     EL +FP +F +S
Subjt:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS

Query:  LENRIKPRHQSCVEKGVCFPLPELLKSSEMKFRE
        L+ RIKPR++     GV   L ++L  S ++F +
Subjt:  LENRIKPRHQSCVEKGVCFPLPELLKSSEMKFRE

Q84X53 Transcription termination factor MTEF1, chloroplastic2.5e-4239.83Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-PASDLIPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++LTS P S+++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-PASDLIPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

Q9FM80 Transcription termination factor MTERF9, chloroplastic2.5e-2127.46Show/hide
Query:  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTALEFRRIVGMCPEILT-SPASDLIPIFTFLLREARVDGSDIKRVINRRPRL
        QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     +  +IV   P + + S  + L P   +L+ E  +  +D+ +V+   P++
Subjt:  QEKMLFLDSIGI---DFLSVIKDHPPVASASLP-DIRSAVDFMTSMNFTALEFRRIVGMCPEILT-SPASDLIPIFTFLLREARVDGSDIKRVINRRPRL

Query:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL
        L   +         FL + +G      +  V KH  LL  S+++  +PRI F  ++G C  D L +     Q+   S+++NL+PK  Y V E+  E+  L
Subjt:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL

Query:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKSSE
         ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+ + E
Subjt:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELLKSSE

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial3.1e-1626.87Show/hide
Query:  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT-SPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQ-
        S I   PP+ S S+ + +   + F  ++     +  +++   P +++ S  + L  I +FL          I +V+ + P L+  SV  RLRPT  FL+ 
Subjt:  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTALEFRRIVGMCPEILT-SPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQ-

Query:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR
        S+G+SE      V     LL   V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + E+  +P +F   L+ +++ R
Subjt:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR

Query:  HQSCVEKGVCFPLPELLKSSEMKFREK
         +   +  +   L E+L  +  KF EK
Subjt:  HQSCVEKGVCFPLPELLKSSEMKFREK

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein1.8e-4339.83Show/hide
Query:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-PASDLIPIFTFLLREARVDGSDIKRVINRRPRLLAC
        F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++LTS P S+++P+  FL  E  +   DI + I+R PRLL  
Subjt:  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTS-PASDLIPIFTFLLREARVDGSDIKRVINRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

AT2G34620.1 Mitochondrial transcription termination factor family protein3.7e-4942.68Show/hide
Query:  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPA-SDLIPIFTFLLREARVDGSDIKRVINRRPRLLACS
        +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +  RI+GMCP+ILTS   ++L P+F FL  +  V  +  +RVI + PRLL  S
Subjt:  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSPA-SDLIPIFTFLLREARVDGSDIKRVINRRPRLLACS

Query:  VKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF
        V+D+L+P L++LQ +G+ ++    ++   LL  SVE  LIP++ F E++GF R +A+ M  R P LF +SI+ N +PKL+YF+ E+  +L+ LKEFP YF
Subjt:  VKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYF

Query:  SFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL
        +FSLE RIKPRH   +E+G+  PL  +LKS++ +F + L
Subjt:  SFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL

AT2G36000.1 Mitochondrial transcription termination factor family protein1.1e-8555.31Show/hide
Query:  FIQHSSPS--PLFPSLPRSRTIHFPVLS-----NSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASAS
        F+  S PS    FPSL R R  +FP LS     +S +S  F S        IP LS     +       S   EK+++LDS+GIDFL++I  HPP+ S +
Subjt:  FIQHSSPS--PLFPSLPRSRTIHFPVLS-----NSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASAS

Query:  LPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTSP-ASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTS
        L  + S VD+MT+  +NFT  +FRR+V MCPE+LTSP  S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  +LRPTLYFLQ IGI + HKHT 
Subjt:  LPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTSP-ASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTS

Query:  LLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK
        LLSCSV+ KL+PRI++FE LGF RR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV FPLP +LK
Subjt:  LLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK

Query:  SSEMKFREKLE
        ++E  FR+ LE
Subjt:  SSEMKFREKLE

AT2G36000.2 Mitochondrial transcription termination factor family protein1.1e-8555.31Show/hide
Query:  FIQHSSPS--PLFPSLPRSRTIHFPVLS-----NSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASAS
        F+  S PS    FPSL R R  +FP LS     +S +S  F S        IP LS     +       S   EK+++LDS+GIDFL++I  HPP+ S +
Subjt:  FIQHSSPS--PLFPSLPRSRTIHFPVLS-----NSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASAS

Query:  LPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTSP-ASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTS
        L  + S VD+MT+  +NFT  +FRR+V MCPE+LTSP  S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  +LRPTLYFLQ IGI + HKHT 
Subjt:  LPDIRSAVDFMTS--MNFTALEFRRIVGMCPEILTSP-ASDLIPIFTFLLREARVDG-SDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTS

Query:  LLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK
        LLSCSV+ KL+PRI++FE LGF RR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV FPLP +LK
Subjt:  LLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLK

Query:  SSEMKFREKLE
        ++E  FR+ LE
Subjt:  SSEMKFREKLE

AT3G18870.1 Mitochondrial transcription termination factor family protein2.4e-3233.84Show/hide
Query:  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL--TSPASDLIPIFTFLLRE
        SPP P S  P +    +  +E +  L S+GI     +  +P +A  +  L  I SAV+ + S   +  +F R+V +CP++   T   S L P+F FL  E
Subjt:  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL--TSPASDLIPIFTFLLRE

Query:  ARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPK
              + + +I   P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++GF   +A  +  R P +F YS+++NL PK
Subjt:  ARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLFCYSIKENLEPK

Query:  LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEP
          + V +M REL+ELK+FP YF+FSL  RI+PRH    +K V   L  +L   + KF  K +P
Subjt:  LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCAACATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTCCAGAACCATCCATTTCCCCGT
ACTCTCCAATTCCAGAACCTCCTTCATTTTCCCTTCCAAACTCCCTCCTCGCAACCTCACCATTCCTCCCCTCTCCCCGCCGCTCCCTCCATCTCCGCCTCACACCGACC
ATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCATCCGCTTCCCTCCCCGACATC
AGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCGCTCTCGAATTCCGTCGTATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCCCGCTTCCGATCTCATCCC
TATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATTAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTAAAAGATCGGCTCCGTC
CAACTCTCTACTTCTTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTGCTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAG
AACTTAGGGTTTTGCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCACAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGT
GGAAATGGGAAGAGAATTGAAAGAATTGAAGGAATTTCCTCATTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTT
GTTTTCCACTGCCGGAGTTGTTGAAAAGCAGTGAGATGAAATTCCGGGAGAAATTGGAGCCATGGGAGTGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCAACCACTTCCTGGATTTCCCTCTGTTAAACCCCACAAGCTCTCCATTCACCATGCAATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCAACAT
TCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCCCGCTCCAGAACCATCCATTTCCCCGTACTCTCCAATTCCAGAACCTCCTTCATTTTCCCTTCCAAACTCCCTCCTCG
CAACCTCACCATTCCTCCCCTCTCCCCGCCGCTCCCTCCATCTCCGCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCG
ACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCATCCGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCGCTCTCGAATTC
CGTCGTATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCCCGCTTCCGATCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATTAA
ACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTAAAAGATCGGCTCCGTCCAACTCTCTACTTCTTGCAAAGCATCGGCATATCCGAGGTACATAAACACA
CATCCTTGCTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTGCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCA
CAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGAAGAGAATTGAAAGAATTGAAGGAATTTCCTCATTATTTCTC
GTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCACTGCCGGAGTTGTTGAAAAGCAGTGAGATGAAATTCCGGGAGA
AATTGGAGCCATGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGAGCAAAAAAATTGATAGATCAAGCTTTGGCTCAAGAAATATTTAGC
ATCTTGCATTGGAACAAGCAGAGGCCTGCAATTTTCTTACAATATGTGTTAGCTCGCTCACTCCCTTCTCGATTAGAATTTTGTTTATGTAATCCTTTGAGGTCGGAGGT
TCAAATCTTTATATTTCTATTTGTTGTACTAAAAGCACAGTAAACAGATCCAAAGGATTTAGACCACGATGTTCAAGGACTTTTGGGTACAAATCCCACAATGTACAGCT
TGTTTGCAAAAATTTGAATGAAATTGTGATGTTTGTTGGGGGTAATTTTTTTTGTTCCTTGTATACAAAAGTTTGAATAAGTTTCGGAGAATGTCTTGTATCATGTTTTG
ATTCTTAGAGATGACTAATAGAGATTATTTTTTTATTGTTTTGAAA
Protein sequenceShow/hide protein sequence
MADSSLHLLSNGGFIQHSSPSPLFPSLPRSRTIHFPVLSNSRTSFIFPSKLPPRNLTIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDI
RSAVDFMTSMNFTALEFRRIVGMCPEILTSPASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFE
NLGFCRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEPWEWE