; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006896 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006896
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr08:1444181..1447271
RNA-Seq ExpressionPI0006896
SyntenyPI0006896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034814.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.9e-6140.87Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R   PKEEEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF---------------------
        H  S  E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI +S T+ +                     
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF---------------------

Query:  -----------------------------------------------------------------------------------------------PVTKG
                                                                                                       PVTKG
Subjt:  -----------------------------------------------------------------------------------------------PVTKG

Query:  TYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGG
        T+K EQ  I +KKS + D   G++N +  T+TK +    E IA  Q++ S P VLRYIPLSRRK GES FAE S+NL V   EILKE+F  PLTK++KG 
Subjt:  TYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGG

Query:  AKRIEKESIEACLPEK
        AK+IEK+ +EA LPE+
Subjt:  AKRIEKESIEACLPEK

KAA0046553.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-6541.51Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------
        H  ST E+DA P N               + + T + E+L S+ INDLL+L RE+KDTII+ILKNDDV T   S TKA                      
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP
           PVTKGT+K EQ  I +KK+ + D L  ++N +L T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTP
Subjt:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP

Query:  LTKMDKGGAKRIEKESIEACLPEK
        LTK++KG AK+IEK+ +EA LPE+
Subjt:  LTKMDKGGAKRIEKESIEACLPEK

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]2.9e-6428.44Show/hide
Query:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE
        MT +GNTSKALS+  KRPNTRS SRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S S R +EE+P PNIMSVMVTDVDTSE RMA+LE
Subjt:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE

Query:  KK--------------------------------------------------------------------------------------------------
        KK                                                                                                  
Subjt:  KK--------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------KNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPIT
                          ND RT  PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI 
Subjt:  -----------------KNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPIT

Query:  LKEFFPENFPFDIVSCHAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF-----
        LK+FFP+NFP +I SCH  ST E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI  S   A+     
Subjt:  LKEFFPENFPFDIVSCHAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------PVTKGTYKPEQGTIPTKKSKEVDILKGR
                                                                                PVTKGT+K EQ  I +KKS + D L  +
Subjt:  ------------------------------------------------------------------------PVTKGTYKPEQGTIPTKKSKEVDILKGR

Query:  ENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK
        +N +  T+TK   P  E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ +EA LPE+
Subjt:  ENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]9.5e-6037.53Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQ-------------------------
        H  ST E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI  S                          
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQ-------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------TKA-----------------------FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPAN
                                     TKA                        PVTKGT+K EQ  I +KKS + D L  ++N +L T+TK   P  
Subjt:  -----------------------------TKA-----------------------FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPAN

Query:  ESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK
        E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ ++A LPE+
Subjt:  ESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]2.9e-3265.62Show/hide
Query:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE
        MT +GNTSKALS+  KRPNTRS SRE QSSEDMPPFEVAK+IW+++SKPPKGGI+IKEN  I+EH S S RS+EE+P PNIMSVMVTDVDTSE RM  LE
Subjt:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE

Query:  KKKN-DIRTVHPKEEE-----KHVENAD
        KK N  ++ V  ++ E      H+E+ D
Subjt:  KKKN-DIRTVHPKEEE-----KHVENAD

TYK28705.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.8e-6541.51Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------
        H  ST E+DA P N               + + T + E+L S+ INDLL+L RE+KDTII+ILKNDDV T   S TKA                      
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP
           PVTKGT+K EQ  I +KKS + D L  ++N +  T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTP
Subjt:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP

Query:  LTKMDKGGAKRIEKESIEACLPEK
        LTK++KG AK+IEK+ +EA LPE+
Subjt:  LTKMDKGGAKRIEKESIEACLPEK

TrEMBL top hitse value%identityAlignment
A0A5A7SUA1 Ty3-gypsy retrotransposon protein1.9e-6140.87Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R   PKEEEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF---------------------
        H  S  E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI +S T+ +                     
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF---------------------

Query:  -----------------------------------------------------------------------------------------------PVTKG
                                                                                                       PVTKG
Subjt:  -----------------------------------------------------------------------------------------------PVTKG

Query:  TYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGG
        T+K EQ  I +KKS + D   G++N +  T+TK +    E IA  Q++ S P VLRYIPLSRRK GES FAE S+NL V   EILKE+F  PLTK++KG 
Subjt:  TYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGG

Query:  AKRIEKESIEACLPEK
        AK+IEK+ +EA LPE+
Subjt:  AKRIEKESIEACLPEK

A0A5A7TSN4 Ty3-gypsy retrotransposon protein1.3e-6541.51Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------
        H  ST E+DA P N               + + T + E+L S+ INDLL+L RE+KDTII+ILKNDDV T   S TKA                      
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP
           PVTKGT+K EQ  I +KK+ + D L  ++N +L T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTP
Subjt:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP

Query:  LTKMDKGGAKRIEKESIEACLPEK
        LTK++KG AK+IEK+ +EA LPE+
Subjt:  LTKMDKGGAKRIEKESIEACLPEK

A0A5A7TZU9 Ribonuclease H4.6e-6037.53Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQ-------------------------
        H  ST E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI  S                          
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQ-------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------TKA-----------------------FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPAN
                                     TKA                        PVTKGT+K EQ  I +KKS + D L  ++N +L T+TK   P  
Subjt:  -----------------------------TKA-----------------------FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPAN

Query:  ESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK
        E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ ++A LPE+
Subjt:  ESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK

A0A5A7TZU9 Ribonuclease H1.6e-3366.41Show/hide
Query:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE
        MT +GNTSKALS+  KRPNTRS SRE QSSEDMPPF+VAK+IWE++SKPPKGGI+IKEN  ++EH S S RS+EE+P PNIMSVMVTDVDTSE RMAELE
Subjt:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE

Query:  KKKNDI-RTVHPKEEE-----KHVENAD
        KK N + + V  ++ E      H+E+ D
Subjt:  KKKNDI-RTVHPKEEE-----KHVENAD

A0A5A7UJR2 Reverse transcriptase1.4e-6428.44Show/hide
Query:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE
        MT +GNTSKALS+  KRPNTRS SRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S S R +EE+P PNIMSVMVTDVDTSE RMA+LE
Subjt:  MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELE

Query:  KK--------------------------------------------------------------------------------------------------
        KK                                                                                                  
Subjt:  KK--------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------KNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPIT
                          ND RT  PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L RPR+PI 
Subjt:  -----------------KNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPIT

Query:  LKEFFPENFPFDIVSCHAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF-----
        LK+FFP+NFP +I SCH  ST E+DA PSN               + E T K E+L  + INDLL+L RE+KDTII+ILKNDDV TI  S   A+     
Subjt:  LKEFFPENFPFDIVSCHAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAF-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------PVTKGTYKPEQGTIPTKKSKEVDILKGR
                                                                                PVTKGT+K EQ  I +KKS + D L  +
Subjt:  ------------------------------------------------------------------------PVTKGTYKPEQGTIPTKKSKEVDILKGR

Query:  ENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK
        +N +  T+TK   P  E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ +EA LPE+
Subjt:  ENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK

A0A5D3DZE5 Ty3-gypsy retrotransposon protein2.8e-6541.51Show/hide
Query:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC
        + ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSC
Subjt:  KKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSC

Query:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------
        H  ST E+DA P N               + + T + E+L S+ INDLL+L RE+KDTII+ILKNDDV T   S TKA                      
Subjt:  HAVSTIEDDASPSNSAEVNTTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKA----------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP
           PVTKGT+K EQ  I +KKS + D L  ++N +  T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTP
Subjt:  --FPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTP

Query:  LTKMDKGGAKRIEKESIEACLPEK
        LTK++KG AK+IEK+ +EA LPE+
Subjt:  LTKMDKGGAKRIEKESIEACLPEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTCAGAGGCAACACTTCCAAAGCTCTAAGCAACACCGAAAAGAGGCCAAATACTCGCAGCCACTCAAGGGAGGCCCAATCGTCTGAGGATATGCCACCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATCTTGTGATTGAGGAACACGGTTCGTCTTCTGGACGCTCAAGTG
AAGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAACATAGAATGGCAGAGCTTGAAAAGAAGAAAAATGACATCCGAACTGTTCAC
CCAAAAGAAGAAGAAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCGCTTGTACCG
AGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCGCGACAACCAA
TAACTTTGAAAGAATTTTTCCCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTCAGTACAATCGAGGATGATGCTTCTCCCTCAAATTCTGCAGAAGTCAAT
ACAACTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAA
AGATACAATTATCAAGATATTAAAAAATGATGATGTCCCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGA
TCCCAACAAAAAAGTCAAAGGAAGTAGATATACTCAAGGGTCGAGAGAATGATAAACTAATGACCCAAACTAAGTCTGAAGTGCCGGCAAATGAAAGTATAGCGATCCCT
CAAGAGAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGT
CGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACATTCAGAGGCAACACTTCCAAAGCTCTAAGCAACACCGAAAAGAGGCCAAATACTCGCAGCCACTCAAGGGAGGCCCAATCGTCTGAGGATATGCCACCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATCTTGTGATTGAGGAACACGGTTCGTCTTCTGGACGCTCAAGTG
AAGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAACATAGAATGGCAGAGCTTGAAAAGAAGAAAAATGACATCCGAACTGTTCAC
CCAAAAGAAGAAGAAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCGCTTGTACCG
AGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCGCGACAACCAA
TAACTTTGAAAGAATTTTTCCCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTCAGTACAATCGAGGATGATGCTTCTCCCTCAAATTCTGCAGAAGTCAAT
ACAACTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAA
AGATACAATTATCAAGATATTAAAAAATGATGATGTCCCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGA
TCCCAACAAAAAAGTCAAAGGAAGTAGATATACTCAAGGGTCGAGAGAATGATAAACTAATGACCCAAACTAAGTCTGAAGTGCCGGCAAATGAAAGTATAGCGATCCCT
CAAGAGAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGT
CGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAATGA
Protein sequenceShow/hide protein sequence
MTFRGNTSKALSNTEKRPNTRSHSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENLVIEEHGSSSGRSSEEMPHPNIMSVMVTDVDTSEHRMAELEKKKNDIRTVH
PKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTIEDDASPSNSAEVN
TTGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIKILKNDDVPTIPASQTKAFPVTKGTYKPEQGTIPTKKSKEVDILKGRENDKLMTQTKSEVPANESIAIP
QEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEK