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PI0006937 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006937
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:9861552..9861761
RNA-Seq ExpressionPI0006937
SyntenyPI0006937
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.0e-1567.16Show/hide
Query:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLS
        M+TDVA  NIMNIC MKHL+  QI+KSTNKNQ+ KR+++N+E +V+ +NQLEIDD+ +VEHIDFLLS
Subjt:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLS
KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-1365.62Show/hide
Query:  AAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLSFK
        A  NI NIC MKHL+  QI+KSTNKNQ+ KR+++N+EF+VN DNQL+ID++ +VEHIDFLLS K
Subjt:  AAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLSFK
KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-0964.29Show/hide
Query:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDI
        M+ DVA  NI NIC MKHL+  QI+KSTNKNQ+ KR+++N+EF+V+ DNQLEIDD+
Subjt:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDI
TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein9.5e-1465.62Show/hide
Query:  AAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLSFK
        A  NI NIC MKHL+  QI+KSTNKNQ+ KR+++N+EF+VN DNQL+ID++ +VEHIDFLLS K
Subjt:  AAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLSFK
A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.3e-1064.29Show/hide
Query:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDI
        M+ DVA  NI NIC MKHL+  QI+KSTNKNQ+ KR+++N+EF+V+ DNQLEIDD+
Subjt:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDI
A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-1567.16Show/hide
Query:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLS
        M+TDVA  NIMNIC MKHL+  QI+KSTNKNQ+ KR+++N+E +V+ +NQLEIDD+ +VEHIDFLLS
Subjt:  MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACGGATGTGGCCGCGAAAAACATAATGAATATATGTACTATGAAGCATCTAGAGACGTCCCAGATCAACAAGAGTACCAACAAGAATCAGAAAATTAAGAGGAG
CCAGGACAACCTAGAGTTCAAAGTCAACGATGACAACCAACTTGAAATCGACGACATCTGGATTGTGGAACACATTGATTTTCTTTTATCTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACGGATGTGGCCGCGAAAAACATAATGAATATATGTACTATGAAGCATCTAGAGACGTCCCAGATCAACAAGAGTACCAACAAGAATCAGAAAATTAAGAGGAG
CCAGGACAACCTAGAGTTCAAAGTCAACGATGACAACCAACTTGAAATCGACGACATCTGGATTGTGGAACACATTGATTTTCTTTTATCTTTTAAATGA
Protein sequenceShow/hide protein sequence
MNTDVAAKNIMNICTMKHLETSQINKSTNKNQKIKRSQDNLEFKVNDDNQLEIDDIWIVEHIDFLLSFK