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PI0006940 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006940
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionChlorophyll a/b-binding family protein
Genome locationchr01:14824670..14826037
RNA-Seq ExpressionPI0006940
SyntenyPI0006940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]6.4e-4086.24Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL--EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDT
        MGRH+ EPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHL  EPNGS T R LDSNSLSLGLNLK+N GKQVD DIHEARS+P DT
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL--EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDT

Query:  KFGLGNSFM
        KFG  NSFM
Subjt:  KFGLGNSFM

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]1.8e-4796.26Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTKF
        MGRHN EPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNL+NNAGKQVD DIHEARSMPGDTKF
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTKF

Query:  GLGNSFM
         LGNSFM
Subjt:  GLGNSFM

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1864.65Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTK
        M RH+ EP +VGTSIALLQERFRQLQK K RRE+KE++ LL +SN +            STSRDL  NSLSLGLNL  NAGKQVDS  HE R MPGDTK
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTK

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2372.63Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVD-ASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSM
        MGRH+ E TM+GTSIALLQERFRQLQK+KQRRE+KELL+LL +SNRV+ +SIMHLE N SS SRDL+ +SLSLGLN  ++AGKQV  DIHEAR++
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVD-ASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSM

PRQ52543.1 hypothetical protein RchiOBHm_Chr2g0156651 [Rosa chinensis]3.1e-1051.58Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDL----------DSNSLSLGLNLKNNAGKQVD
        MGRH+ +P MV +SIALLQERFRQLQK K+RRE ++LL  L E+ RV  S  H EP   S   D+            +SLSLGLNL+    KQVD
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDL----------DSNSLSLGLNLKNNAGKQVD

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein3.1e-4890.68Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTKF
        MGRHN EPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNL+NNAGKQVD DIHEARSMPGDTKF
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTKF

Query:  GLGNSFM----GTFDSRN
         LGNSFM     +FDS N
Subjt:  GLGNSFM----GTFDSRN

A0A2P6S1J5 Uncharacterized protein1.5e-1051.58Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDL----------DSNSLSLGLNLKNNAGKQVD
        MGRH+ +P MV +SIALLQERFRQLQK K+RRE ++LL  L E+ RV  S  H EP   S   D+            +SLSLGLNL+    KQVD
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDL----------DSNSLSLGLNLKNNAGKQVD

A0A2Z6PF68 Uncharacterized protein2.2e-0951.72Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL-EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDS
        MGR + +PTMV +SIALLQERFRQL+K K+RRE K+LL LL   +   AS   L  PN   T  D    SLSLGLNL +  G  +++
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL-EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDS

A0A5D3E685 Uncharacterized protein3.1e-4086.24Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL--EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDT
        MGRH+ EPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHL  EPNGS T R LDSNSLSLGLNLK+N GKQVD DIHEARS+P DT
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL--EPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDT

Query:  KFGLGNSFM
        KFG  NSFM
Subjt:  KFGLGNSFM

G7KEN3 Uncharacterized protein7.4e-1056.1Show/hide
Query:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL-EPNGSSTSRDLDSNSLSLGLNLKNNAG
        MGR + +PTMV +SIALLQERFRQL+K K+RRE K+LL LL   N   AS   L  PN   T  D    SLSLGLNL +  G
Subjt:  MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHL-EPNGSSTSRDLDSNSLSLGLNLKNNAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGCACAATGGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAGGAGAGAGAGGAAGGAGCT
TCTTAACCTATTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAAACGGCTCGTCGACCTCAAGAGATTTGGATTCCAATTCCCTCTCCCTTGGTT
TGAACTTGAAGAATAATGCAGGTAAGCAAGTTGATAGTGATATCCATGAAGCCAGGTCGATGCCAGGTGACACCAAGTTCGGGCTCGGAAACTCATTCATGGGGACGTTT
GACTCAAGGAATTGCTGGAGTAAAATTCTTGGAGTTAAGAACTTTACATATTTGGCTCAAAGATTTCTTGGACTCCACGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGCACAATGGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAGGAGAGAGAGGAAGGAGCT
TCTTAACCTATTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAAACGGCTCGTCGACCTCAAGAGATTTGGATTCCAATTCCCTCTCCCTTGGTT
TGAACTTGAAGAATAATGCAGGTAAGCAAGTTGATAGTGATATCCATGAAGCCAGGTCGATGCCAGGTGACACCAAGTTCGGGCTCGGAAACTCATTCATGGGGACGTTT
GACTCAAGGAATTGCTGGAGTAAAATTCTTGGAGTTAAGAACTTTACATATTTGGCTCAAAGATTTCTTGGACTCCACGACTAAAAGCGTTAATTTTATGATTTATTAAC
TATACTATAATTCTAATTCGTTCACGTACTTGTACCAAATAATAAATGACATTTTAACTCTTCAATGCTCGATAAAT
Protein sequenceShow/hide protein sequence
MGRHNGEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLKNNAGKQVDSDIHEARSMPGDTKFGLGNSFMGTF
DSRNCWSKILGVKNFTYLAQRFLGLHD