CuGenDBv2

Gene ID	PI0006950
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	MSC domain-containing protein
Genome location	chr04:32926424..32932143
RNA-Seq Expression	PI0006950
Synteny	PI0006950
Gene Ontology terms	GO:0005637 - nuclear inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR018996 - Man1/Src1, C-terminal IPR041885 - MAN1, winged-helix domain IPR044780 - Heh2/Src1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038534.1 MSC domain-containing protein [Cucumis melo var. makuwa]

6.3e-208

93.8

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+KKLASKSNS       KAIGVNPDP+
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

XP_004148518.1 uncharacterized protein LOC101208017 isoform X1 [Cucumis sativus]

1.4e-207

93.09

Show/hide

Query:  MSSTPKKRTKAKRNPNSDV----GSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSD
        MSSTPKKRTK KRNPNSDV    GSGV+SSVSSSS LLKSIKEPPRDFFPSKDDLAALITVLIIAC VFVSCNFFVSRLSSRHPIPFCDTDADS D +SD
Subjt:  MSSTPKKRTKAKRNPNSDV----GSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSD

Query:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKAL
        VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKAL
Subjt:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKAL

Query:  ETVGGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCE
        ET+GGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYN VCEILEENALTST NSGQCE
Subjt:  ETVGGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCE

Query:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        SWVVASRLRDHLLLPRER+NPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS +KKLASKSNS       KAIGVNPDP+
Subjt:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

XP_008465929.1 PREDICTED: uncharacterized protein LOC103503505 isoform X1 [Cucumis melo]

1.2e-195

95.47

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ E
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE

XP_008465930.1 PREDICTED: uncharacterized protein LOC103503505 isoform X3 [Cucumis melo]

6.3e-208

93.8

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+KKLASKSNS       KAIGVNPDP+
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

XP_038888162.1 uncharacterized protein LOC120078048 [Benincasa hispida]

9.7e-201

89.29

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRN NSDVGS  +SSVSSS+ LLKSIKEPPRDFFPSKDDLAALITVL IACL+FVSC+FFVSRL+SR P PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKL+CLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKE+DIWDDLDGK+LVESIGSDNTTL YAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GL QTRQNSLGIKELKCPDLLAESYKPFTCRIRHW+LQHAF VLPVFLLLVGCTWLLWKLYRRQY+TNRAEDLYN VCEILEENAL ST NSGQCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSRKAIGVNPDPITAPI---PLPL
        ASRLRDHLLLPRERKNPLLW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEK+LA+KSNS KA+GV+ D + + +   P PL
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSRKAIGVNPDPITAPI---PLPL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI89 MSC domain-containing protein

6.8e-208

93.09

Show/hide

Query:  MSSTPKKRTKAKRNPNSDV----GSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSD
        MSSTPKKRTK KRNPNSDV    GSGV+SSVSSSS LLKSIKEPPRDFFPSKDDLAALITVLIIAC VFVSCNFFVSRLSSRHPIPFCDTDADS D +SD
Subjt:  MSSTPKKRTKAKRNPNSDV----GSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSD

Query:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKAL
        VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKAL
Subjt:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKAL

Query:  ETVGGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCE
        ET+GGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYN VCEILEENALTST NSGQCE
Subjt:  ETVGGLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCE

Query:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        SWVVASRLRDHLLLPRER+NPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS +KKLASKSNS       KAIGVNPDP+
Subjt:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

A0A1S3CQ15 uncharacterized protein LOC103503505 isoform X3

3.0e-208

93.8

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+KKLASKSNS       KAIGVNPDP+
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

A0A1S3CRG1 uncharacterized protein LOC103503505 isoform X1

5.9e-196

95.47

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ E
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE

A0A1S4E5Q9 uncharacterized protein LOC103503505 isoform X4

1.3e-195

95.73

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ

A0A5A7T509 MSC domain-containing protein

3.0e-208

93.8

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        MSSTPKKRTK KRNPNSDVGSGV+SSVSSSS LLKS+KEPPRDFFPSKDDLAALITVLIIA LVFVSCNFFVSRLSSRHP+PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSS-LLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGK+LVESIGSDNTTLMYAKSKALET+G
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV
        GLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHW+LQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYN VCEILEENALTST NS QCESWVV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+KKLASKSNS       KAIGVNPDP+
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSR------KAIGVNPDPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46560.1 CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

1.5e-95

48.63

Show/hide

Query:  MSSTPKKRTKAKRNPNSDVGSG-VNSSVSSSSLLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP
        M S P+KR      P S+  +G    S SSSS ++S+ EPP+  FPSK +   L+ VL++AC V  +CNF    LSS     FCD++ + +D   D+CEP
Subjt:  MSSTPKKRTKAKRNPNSDVGSG-VNSSVSSSSLLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG
        CP +GEC  GKL+C  GY+    LC+EDG INE+  KL  + E  +CE+ A   C G G +WV END+W +L     + ++  D +   + K KA+E V 
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVG

Query:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTS-NSGQCESWV
         LL+ R NS GI ELKCP+ +A+SYKP TCR+  WIL+H  ++     +LVG   L  ++ R+Q  + R E+LY+ VC+ LEENA+ S S  +  CE WV
Subjt:  GLLQTRQNSLGIKELKCPDLLAESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTS-NSGQCESWV

Query:  VASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKK
        +AS LRD+LLLPRER++PLLW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS SK KK
Subjt:  VASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKK

Sequences

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CDS sequence

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ATGTCTTCAACTCCGAAGAAGCGAACGAAAGCCAAGCGTAATCCAAACTCTGATGTCGGTTCTGGCGTCAATTCCTCTGTTTCATCTTCTTCGTTGCTGAAGTCTATCAA
GGAACCGCCTCGCGATTTCTTCCCCTCGAAGGATGATCTTGCTGCGCTGATTACTGTACTTATCATCGCCTGCTTGGTTTTTGTGAGCTGTAACTTCTTCGTATCTAGAC
TTTCAAGTCGCCATCCGATCCCTTTCTGTGATACCGACGCTGATTCTTTGGATTTGCTTTCTGATGTTTGTGAGCCTTGTCCAAGGCATGGAGAATGCCGCGATGGTAAG
TTGGAATGCCTTCATGGTTATAGAAAGCATGGAAGATTGTGTATAGAAGATGGGGTAATCAATGAAGCAGTTAATAAACTTTCAGAATGGCTAGAATCTCACCTCTGTGA
AGCAAATGCTAAGTTCTTATGCGATGGAATTGGGATAGTTTGGGTCAAAGAGAATGATATATGGGATGATCTAGATGGTAAAAAGCTGGTGGAAAGTATTGGCTCTGACA
ACACTACCCTTATGTATGCAAAGAGCAAGGCGTTGGAAACTGTTGGTGGGTTACTTCAGACACGACAAAATTCTCTTGGGATCAAGGAATTGAAATGCCCAGATCTGCTA
GCTGAAAGTTACAAGCCTTTTACTTGCCGCATTCGTCACTGGATTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTTCTTACTGCTTGTGGGATGCACGTGGTTACTATG
GAAACTTTACCGAAGACAATACCTAACAAATAGAGCTGAAGATCTGTACAACCACGTTTGTGAAATACTTGAGGAAAATGCTTTAACGTCAACGAGTAACAGCGGTCAAT
GTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGAATCCTTTGTTATGGAAGAAGGTAGAGGAGTTGGTTCAGGAAGACTCA
CGAATAGATCGTTACCCAAGATTAGTCAAGGGTGATGGAAAAGAAGTATGGGAATGGCAAGTGGAAGGCTCTTTGAGCTCTTCAAAGGAAAAGAAACTGGCCAGCAAATC
CAATTCCAGGAAGGCAATAGGAGTAAATCCTGACCCAATAACTGCTCCAATTCCATTGCCATTAGCATCTGCCACTAGTTCAAATGGTTTAGAAAAATCAGGTAAGCCAA
AACTGGAGGTGGCACCAACTTGGATTTAA

mRNA sequence

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Protein sequence

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MSSTPKKRTKAKRNPNSDVGSGVNSSVSSSSLLKSIKEPPRDFFPSKDDLAALITVLIIACLVFVSCNFFVSRLSSRHPIPFCDTDADSLDLLSDVCEPCPRHGECRDGK
LECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCEANAKFLCDGIGIVWVKENDIWDDLDGKKLVESIGSDNTTLMYAKSKALETVGGLLQTRQNSLGIKELKCPDLL
AESYKPFTCRIRHWILQHAFVVLPVFLLLVGCTWLLWKLYRRQYLTNRAEDLYNHVCEILEENALTSTSNSGQCESWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDS
RIDRYPRLVKGDGKEVWEWQVEGSLSSSKEKKLASKSNSRKAIGVNPDPITAPIPLPLASATSSNGLEKSGKPKLEVAPTWI

PI0006950 (gene) of Melon (PI 482460) v1 genome