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PI0006983 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006983
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationchr11:5225754..5226065
RNA-Seq ExpressionPI0006983
SyntenyPI0006983
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033371.1 AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa]2.2e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

XP_004145829.2 AT-hook motif nuclear-localized protein 9 isoform X2 [Cucumis sativus]6.3e-1657.28Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG
        MEPQ+R NFTV+HE   S    D  Q   GD  ID+EDR  ES  G+T +MKKRK R  KND +D +NP SSADSQT P R  L  PP  GK QVLA+LG
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG

Query:  TYA
         YA
Subjt:  TYA

XP_008458631.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo]2.2e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

XP_008458632.1 PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X2 [Cucumis melo]2.2e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

XP_031742689.1 AT-hook motif nuclear-localized protein 9 isoform X1 [Cucumis sativus]6.3e-1657.28Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG
        MEPQ+R NFTV+HE   S    D  Q   GD  ID+EDR  ES  G+T +MKKRK R  KND +D +NP SSADSQT P R  L  PP  GK QVLA+LG
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG

Query:  TYA
         YA
Subjt:  TYA

TrEMBL top hitse value%identityAlignment
A0A0A0KBM8 AT-hook motif nuclear-localized protein3.1e-1657.28Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG
        MEPQ+R NFTV+HE   S    D  Q   GD  ID+EDR  ES  G+T +MKKRK R  KND +D +NP SSADSQT P R  L  PP  GK QVLA+LG
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKR-RLARPPCSGKTQVLATLG

Query:  TYA
         YA
Subjt:  TYA

A0A0A0KES5 Uncharacterized protein5.2e-1658.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRK-NDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLG
        ME +   NF V+HE   SD          GDGEIDEE RH E    K ISMKKRKGRPRK NDAVDR++P S+ DSQTKP+RR    P    +QVLATLG
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRK-NDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLG

Query:  TYAS
        TYAS
Subjt:  TYAS

A0A1S3C8A9 AT-hook motif nuclear-localized protein1.0e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

A0A1S3C8E7 AT-hook motif nuclear-localized protein1.0e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

A0A5D3BDW3 AT-hook motif nuclear-localized protein1.0e-2467.65Show/hide
Query:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT
        MEPQNR NFTV+HE P SD   D  QR  GD  IDEEDR  ES  GKT++MKK KGRPRKNDAV+ QNP SSADSQT PK  L  PP  GK QVLA+LG 
Subjt:  MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGT

Query:  YA
        YA
Subjt:  YA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTCAAAATCGCACAAACTTCACGGTGCAACATGAATTGCCGGTTAGTGATTACACGTTGGACGACGTACAGAGGTGGTTCGGTGATGGCGAAATCGACGAGGA
AGATAGACATAGAGAATCGGGCTGCGGGAAGACAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAAAACGACGCCGTCGACCGCCAAAATCCGCCGTCGTCTGCCG
ATTCACAAACCAAACCTAAACGCCGTCTTGCCCGCCCTCCTTGTTCTGGTAAAACGCAGGTTTTGGCAACGTTAGGTACGTACGCTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTCAAAATCGCACAAACTTCACGGTGCAACATGAATTGCCGGTTAGTGATTACACGTTGGACGACGTACAGAGGTGGTTCGGTGATGGCGAAATCGACGAGGA
AGATAGACATAGAGAATCGGGCTGCGGGAAGACAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAAAACGACGCCGTCGACCGCCAAAATCCGCCGTCGTCTGCCG
ATTCACAAACCAAACCTAAACGCCGTCTTGCCCGCCCTCCTTGTTCTGGTAAAACGCAGGTTTTGGCAACGTTAGGTACGTACGCTAGCTAG
Protein sequenceShow/hide protein sequence
MEPQNRTNFTVQHELPVSDYTLDDVQRWFGDGEIDEEDRHRESGCGKTISMKKRKGRPRKNDAVDRQNPPSSADSQTKPKRRLARPPCSGKTQVLATLGTYAS