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PI0007007 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007007
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:13322313..13323230
RNA-Seq ExpressionPI0007007
SyntenyPI0007007
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-3074.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
KAA0058278.1 gag/pol protein [Cucumis melo var. makuwa]4.6e-3175Show/hide
Query:  SFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        S IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T+ ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTAHQIMDSL
Subjt:  SFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
KAA0064290.1 gag/pol protein [Cucumis melo var. makuwa]7.9e-3174.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYAMWKS LNMILVI DL FVL+E CP   T+NASQ+V+DAY  WTKANDK R+YIL S+ D+LSKKHE+MVTAHQIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
TYK04171.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-3074.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
TYK16041.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-3074.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
TrEMBL top hitse value%identityAlignment
A0A5A7TZD0 Gag/pol protein8.5e-3174.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
A0A5A7USZ2 Gag/pol protein2.2e-3175Show/hide
Query:  SFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        S IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T+ ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTAHQIMDSL
Subjt:  SFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
A0A5A7UYE8 Gag/pol protein8.5e-3174.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
A0A5A7VAN8 Gag/pol protein3.8e-3174.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYAMWKS LNMILVI DL FVL+E CP   T+NASQ+V+DAY  WTKANDK R+YIL S+ D+LSKKHE+MVTAHQIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
A0A5D3BUN8 Gag/pol protein8.5e-3174.23Show/hide
Query:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
        SS IIALLK ++L GENYA WKS LNMILVI DL FVLME CP F T++ASQ+V+DAY RWTKANDK R++ILAS+ D+LSKKHE+MVTA QIMDSL
Subjt:  SSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTAHQIMDSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCTGGGTGCGACCTTCCTTTGGAAAGTGTTTGTATGGATCAATAACAAGCAAGTCTTCCTTTATTATTGCACTGCTAAAAAACGAAAAGTTAATTGGTGAAAA
TTATGCGATGTGGAAGTCAAACCTGAATATGATTCTGGTTATTGATGATCTACTCTTTGTCTTAATGGAAGCATGTCCTCTTTTCTCTACTCGAAATGCATCCCAAACTG
TCAAGGATGCGTATTACCGTTGGACAAAGGCCAATGACAAGACTCGTATCTACATCTTGGCCAGTGTGCTTGATGTACTGAGCAAGAAGCATGAGGTCATGGTCACTGCA
CATCAGATCATGGACTCCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCTGGGTGCGACCTTCCTTTGGAAAGTGTTTGTATGGATCAATAACAAGCAAGTCTTCCTTTATTATTGCACTGCTAAAAAACGAAAAGTTAATTGGTGAAAA
TTATGCGATGTGGAAGTCAAACCTGAATATGATTCTGGTTATTGATGATCTACTCTTTGTCTTAATGGAAGCATGTCCTCTTTTCTCTACTCGAAATGCATCCCAAACTG
TCAAGGATGCGTATTACCGTTGGACAAAGGCCAATGACAAGACTCGTATCTACATCTTGGCCAGTGTGCTTGATGTACTGAGCAAGAAGCATGAGGTCATGGTCACTGCA
CATCAGATCATGGACTCCCTCTAG
Protein sequenceShow/hide protein sequence
MSSWVRPSFGKCLYGSITSKSSFIIALLKNEKLIGENYAMWKSNLNMILVIDDLLFVLMEACPLFSTRNASQTVKDAYYRWTKANDKTRIYILASVLDVLSKKHEVMVTA
HQIMDSL