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PI0007008 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007008
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:14950631..14952805
RNA-Seq ExpressionPI0007008
SyntenyPI0007008
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.7e-7472.17Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ     V+P+MMMP FGT YYDSGVGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNS+ G SS++FGQ YYDLG+DPSSSY+HGHG G G+HNEYLYYE PAAVPE               Q DEQQQQEN E ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.4e-7572.43Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ       V+P+MMMP FGT YYDSGVG
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG

Query:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAA---------------VPEQPDEQQQQENQEGLEQQRVQGRRR
        QSSDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+H HG G GEHNEYLYYE PAA               VPEQ DEQQQQENQE ++QQRVQ RRR
Subjt:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAA---------------VPEQPDEQQQQENQEGLEQQRVQGRRR

Query:  QPARNRRRPSCGTH
        QPARNRRRP CGTH
Subjt:  QPARNRRRPSCGTH

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-7573.11Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQT--QRRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RL +VA+DPQQVL+ICNNNE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT  +   V+P+MMMP FGT YYDSGVGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQT--QRRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPEQPDE---------------QQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPEQ DE               QQQQENQE ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPEQPDE---------------QQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.4e-7573.11Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ     V+P+MMMP FGT YYDS VGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPE               Q DEQQQQENQE ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.8e-7672.9Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ       V+P+MMMP FGT YYDSGVG
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG

Query:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRR
        QSSDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPE               Q DEQQQQENQE ++QQRVQ RRR
Subjt:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRR

Query:  QPARNRRRPSCGTH
        QPARNRRRP CGTH
Subjt:  QPARNRRRPSCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.1e-7572.43Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ       V+P+MMMP FGT YYDSGVG
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG

Query:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAA---------------VPEQPDEQQQQENQEGLEQQRVQGRRR
        QSSDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+H HG G GEHNEYLYYE PAA               VPEQ DEQQQQENQE ++QQRVQ RRR
Subjt:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAA---------------VPEQPDEQQQQENQEGLEQQRVQGRRR

Query:  QPARNRRRPSCGTH
        QPARNRRRP CGTH
Subjt:  QPARNRRRPSCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein9.5e-7673.11Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQT--QRRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RL +VA+DPQQVL+ICNNNE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT  +   V+P+MMMP FGT YYDSGVGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQT--QRRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPEQPDE---------------QQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPEQ DE               QQQQENQE ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPEQPDE---------------QQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-7573.11Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ     V+P+MMMP FGT YYDS VGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPE               Q DEQQQQENQE ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein8.1e-7572.17Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ     V+P+MMMP FGT YYDSGVGQS
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ--RRLVTPMMMMPAFGTGYYDSGVGQS

Query:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP
        SDFG GYYNS+ G SS++FGQ YYDLG+DPSSSY+HGHG G G+HNEYLYYE PAAVPE               Q DEQQQQEN E ++QQRVQ RRRQP
Subjt:  SDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRRQP

Query:  ARNRRRPSCGTH
        ARNRRRP CGTH
Subjt:  ARNRRRPSCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-7672.9Show/hide
Query:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG
        SNN RLR+VA+DPQQVL+ICN+NE+YM NIHYMYDVPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQ       V+P+MMMP FGT YYDSGVG
Subjt:  SNNSRLRDVANDPQQVLDICNNNERYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQ----RRLVTPMMMMPAFGTGYYDSGVG

Query:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRR
        QSSDFG GYYNSE G SS++FGQ YYDLG+DPSSSY+HGHG G GEHNEYLYYE PAAVPE               Q DEQQQQENQE ++QQRVQ RRR
Subjt:  QSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVHGHGCGHGEHNEYLYYEAPAAVPE---------------QPDEQQQQENQEGLEQQRVQGRRR

Query:  QPARNRRRPSCGTH
        QPARNRRRP CGTH
Subjt:  QPARNRRRPSCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAGCTTTTAGCAGCACTGGCACAGGCAAC
AACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGATGAATTGGCAAGCCTGGAAT
ACGATCTAAATGATCCGTTCCTCGACTCACAGCCAATGTCGAACAATAGTAGACTTCGGGATGTTGCAAATGATCCACAGCAGGTCCTAGATATATGCAACAATAATGAG
CGGTACATGGCAAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACA
ACACGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGGAGACTAGTGACTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTCGGGACAGGATATTATAATTCAGAGGTAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTCATACGTGCAT
GGACATGGGTGTGGTCATGGAGAACATAACGAATATTTATACTACGAAGCGCCTGCAGCGGTACCCGAGCAACCAGATGAGCAACAACAACAAGAGAATCAGGAAGGACT
AGAGCAACAAAGAGTGCAGGGTCGACGACGGCAACCAGCTAGAAATCGGCGACGTCCAAGTTGTGGAACACATTCATTTTTTTTTAATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAGCTTTTAGCAGCACTGGCACAGGCAAC
AACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGATGAATTGGCAAGCCTGGAAT
ACGATCTAAATGATCCGTTCCTCGACTCACAGCCAATGTCGAACAATAGTAGACTTCGGGATGTTGCAAATGATCCACAGCAGGTCCTAGATATATGCAACAATAATGAG
CGGTACATGGCAAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACA
ACACGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGGAGACTAGTGACTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAAT
CGTCAGACTTCGGGACAGGATATTATAATTCAGAGGTAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTCATACGTGCAT
GGACATGGGTGTGGTCATGGAGAACATAACGAATATTTATACTACGAAGCGCCTGCAGCGGTACCCGAGCAACCAGATGAGCAACAACAACAAGAGAATCAGGAAGGACT
AGAGCAACAAAGAGTGCAGGGTCGACGACGGCAACCAGCTAGAAATCGGCGACGTCCAAGTTGTGGAACACATTCATTTTTTTTTAATTTGTAA
Protein sequenceShow/hide protein sequence
MKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDDELASLEYDLNDPFLDSQPMSNNSRLRDVANDPQQVLDICNNNE
RYMANIHYMYDVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQRRLVTPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEVGPSSSNFGQGYYDLGTDPSSSYVH
GHGCGHGEHNEYLYYEAPAAVPEQPDEQQQQENQEGLEQQRVQGRRRQPARNRRRPSCGTHSFFFNL