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PI0007077 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007077
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:17304138..17304512
RNA-Seq ExpressionPI0007077
SyntenyPI0007077
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-3470.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD QE A ++N F  SQRQLL+ LELL N+ +RI H  Y+ RHRIRQL YF MIH SDLVCR+STRMDRRCFAILCHLLR  +GL STEVVD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LH+LA++VKN
Subjt:  LHVLAYEVKN

KAA0048777.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-3570.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD Q    +L  FT +QRQ+L+TLELLMNN++R+ HT  D RHRIR+L YF MIHESDLVCRQSTRMDRR FAILCHLLR  +GL STE+VD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLA++VKN
Subjt:  LHVLAYEVKN

KAA0050301.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-3473.64Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        M+ Q    +L VFT +QRQ+L+TLELLMN +RRI HT  D RHRIRQL YF MIHESDLVCRQSTRMD+R FAILCHLLR   GL STE+VDIEEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLAY VKN
Subjt:  LHVLAYEVKN

KAA0058874.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-3570.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD Q    +L  FT++QRQ+L+TLELLMNN++R+ HT  D RHRIR+L YF MIHESDLVCRQSTRMDRR FAILCHLLR  +GL STE+VD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLA++VKN
Subjt:  LHVLAYEVKN

KAA0065736.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-3571.82Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD  E A ++N F  SQRQLL+ LELL N+ +RI H  Y+ RHRIRQL YF MIHESDLVCRQSTRMDRRCFAILCHLLR  +GL STEVVD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LH+LA++VKN
Subjt:  LHVLAYEVKN

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein7.9e-3570.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD QE A ++N F  SQRQLL+ LELL N+ +RI H  Y+ RHRIRQL YF MIH SDLVCR+STRMDRRCFAILCHLLR  +GL STEVVD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LH+LA++VKN
Subjt:  LHVLAYEVKN

A0A5A7U3B3 Retrotransposon protein4.6e-3570.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD Q    +L  FT +QRQ+L+TLELLMNN++R+ HT  D RHRIR+L YF MIHESDLVCRQSTRMDRR FAILCHLLR  +GL STE+VD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLA++VKN
Subjt:  LHVLAYEVKN

A0A5A7UUT3 Retrotransposon protein3.5e-3570.91Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD Q    +L  FT++QRQ+L+TLELLMNN++R+ HT  D RHRIR+L YF MIHESDLVCRQSTRMDRR FAILCHLLR  +GL STE+VD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLA++VKN
Subjt:  LHVLAYEVKN

A0A5A7VHB0 Retrotransposon protein2.1e-3571.82Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        MD  E A ++N F  SQRQLL+ LELL N+ +RI H  Y+ RHRIRQL YF MIHESDLVCRQSTRMDRRCFAILCHLLR  +GL STEVVD+EEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LH+LA++VKN
Subjt:  LHVLAYEVKN

A0A5D3BWN8 Retrotransposon protein7.9e-3573.64Show/hide
Query:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF
        M+ Q    +L VFT +QRQ+L+TLELLMN +RRI HT  D RHRIRQL YF MIHESDLVCRQSTRMD+R FAILCHLLR   GL STE+VDIEEMV MF
Subjt:  MDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEMVVMF

Query:  LHVLAYEVKN
        LHVLAY VKN
Subjt:  LHVLAYEVKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGAATTTGAACAGGTCATTAGTCGTGATCTTGTAATGGATCCACAAGAAGCTGCTAGACTCCTAAATGTGTTCACAACTTCTCAACGTCAGTTACTAATGAC
GTTGGAGTTATTAATGAACAACCACAGGAGGATACAACATACAACATATGACGCTAGGCATAGAATTAGGCAGCTAGAGTACTTCTGCATGATCCATGAATCCGACCTAG
TATGTCGTCAAAGTACTAGAATGGACAGAAGATGTTTTGCCATTCTATGCCACCTACTTAGGATGACTTCTGGATTAGGGTCCACGGAAGTCGTCGACATCGAGGAGATG
GTCGTCATGTTCCTACACGTACTCGCGTACGAAGTGAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGAATTTGAACAGGTCATTAGTCGTGATCTTGTAATGGATCCACAAGAAGCTGCTAGACTCCTAAATGTGTTCACAACTTCTCAACGTCAGTTACTAATGAC
GTTGGAGTTATTAATGAACAACCACAGGAGGATACAACATACAACATATGACGCTAGGCATAGAATTAGGCAGCTAGAGTACTTCTGCATGATCCATGAATCCGACCTAG
TATGTCGTCAAAGTACTAGAATGGACAGAAGATGTTTTGCCATTCTATGCCACCTACTTAGGATGACTTCTGGATTAGGGTCCACGGAAGTCGTCGACATCGAGGAGATG
GTCGTCATGTTCCTACACGTACTCGCGTACGAAGTGAAGAACTGA
Protein sequenceShow/hide protein sequence
MENEFEQVISRDLVMDPQEAARLLNVFTTSQRQLLMTLELLMNNHRRIQHTTYDARHRIRQLEYFCMIHESDLVCRQSTRMDRRCFAILCHLLRMTSGLGSTEVVDIEEM
VVMFLHVLAYEVKN