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PI0007080 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007080
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:8498635..8499497
RNA-Seq ExpressionPI0007080
SyntenyPI0007080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]3.0e-9373.02Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LWKGKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAW+E YILKG+ LW VDS VGRSW  RAILR R+ L+ HV M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G RCRVWLDPWL GGAI+ Q+GERV+YDA S REARLS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGRQG FSI+SAWEAICP
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]3.6e-7068.82Show/hide
Query:  IREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVWLDPWLHGGAIIRQMGERVV
        +R+G SWN    LK+LWL LTS  SLWVAWVE YILK + LW+VDSGV RSW LRAILR RD L+ HV +EVGDG  CRVWLDPWL G  I+ Q+GERV+
Subjt:  IREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVWLDPWLHGGAIIRQMGERVV

Query:  YDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICPRNDKVCWACLLWVGG
        YDA S REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWVWVPG QG FSI+SA + I PR  +V W  LLW GG
Subjt:  YDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICPRNDKVCWACLLWVGG

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.9e-8770.23Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LW+GKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAWVE YILKGR LW VDS VG+SW LRAILR R+ L+  V M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G   RVWLDPWL  GAI+ Q+GERV+YDA S R+ARLS+FI  DGEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGR+G FSI+SAWEA+ P
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]6.7e-9372.56Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LWKGKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAW+E YILKG+ LW VDS VGRSW  RAILR R+ L+ HV M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G RCRVWLDPWL GGAI+ Q+GERV+YDA S REARLS+FI  +GEW WPRVS EL++LWERVQ V PCL++ D WVWVPGRQG FSI+SAWEAICP
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

XP_031745730.1 uncharacterized protein LOC116406187 [Cucumis sativus]3.5e-8163.26Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LW+GK++GRG A+VAW +VC PF+EGGL+IR+G SWN A  LK+LWL+L  SGSLWVAWVE YILKGR LW +D+GVGRSW  R ILR +DIL+ HV ME
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+GR+ RVWL PW+ GG II+Q GERV+YDA S  +ARL +F+G DG+WRWP V  +L+++W+RVQGVRP  S+ DRWVWVPG    FSI+S WE I P
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
         + +V W+ LLW GG
Subjt:  RNDKVCWACLLWVGG

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein1.5e-9373.02Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LWKGKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAW+E YILKG+ LW VDS VGRSW  RAILR R+ L+ HV M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G RCRVWLDPWL GGAI+ Q+GERV+YDA S REARLS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGRQG FSI+SAWEAICP
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.7e-7068.82Show/hide
Query:  IREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVWLDPWLHGGAIIRQMGERVV
        +R+G SWN    LK+LWL LTS  SLWVAWVE YILK + LW+VDSGV RSW LRAILR RD L+ HV +EVGDG  CRVWLDPWL G  I+ Q+GERV+
Subjt:  IREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVWLDPWLHGGAIIRQMGERVV

Query:  YDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICPRNDKVCWACLLWVGG
        YDA S REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWVWVPG QG FSI+SA + I PR  +V W  LLW GG
Subjt:  YDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICPRNDKVCWACLLWVGG

A0A5A7TZS0 Reverse transcriptase domain-containing protein5.1e-7061.4Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LW+GKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+L   LT+ GSLWVAW+E YILKG+ LW VDS VGRSW LRAILR R+ ++ HV   
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
                                GERV+YDA S REA+LS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGRQG FSI+SAWEAICP
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

A0A5A7V3Z0 Reverse transcriptase domain-containing protein9.2e-8870.23Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LW+GKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAWVE YILKGR LW VDS VG+SW LRAILR R+ L+  V M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G   RVWLDPWL  GAI+ Q+GERV+YDA S R+ARLS+FI  DGEW WPRVS EL++LWERVQ V PCLS+ D WVWVPGR+G FSI+SAWEA+ P
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

A0A5D3BDZ6 Zf-RVT domain-containing protein3.3e-9372.56Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LWKGKE+GRGG +VAWVDVC PFEEGGL IR+G SWN A  LK+LWLMLT+SGSLWVAW+E YILKG+ LW VDS VGRSW  RAILR R+ L+ HV M+
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP
        VG+G RCRVWLDPWL GGAI+ Q+GERV+YDA S REARLS+FI  +GEW WPRVS EL++LWERVQ V PCL++ D WVWVPGRQG FSI+SAWEAICP
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICP

Query:  RNDKVCWACLLWVGG
        R  +V W  LLW GG
Subjt:  RNDKVCWACLLWVGG

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.2e-1326.84Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRL---LWSVDSGVGRSWSLRAILRHRDILREHV
        LW    + +    V W  VC P +EGGL +R  KS N A I KV W +L    SLW   ++     G +    W +  G   S      +  RD++   V
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRL---LWSVDSGVGRSWSLRAILRHRDILREHV

Query:  HMEVGDGRRCRVWLDPWLHGGAIIR-QMGERVV-YDATSSRE----------ARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGR
            GDG++ R W D W+ G  ++    GER    D   +++          A++  +  ++       V  +L      V G R      DR  W   +
Subjt:  HMEVGDGRRCRVWLDPWLHGGAIIR-QMGERVV-YDATSSRE----------ARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGR

Query:  QGEFSISSAWEAI----CPRNDKVCWACLLW
         G+FS+ SA+E +     PR +   +   LW
Subjt:  QGEFSISSAWEAI----CPRNDKVCWACLLW

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-1029.86Show/hide
Query:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME
        LW G E     A+VAW DVC P +EGGL IR  K  N               GS W               S ++ +G SW  + IL+HR +    V  +
Subjt:  LWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHME

Query:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFI
        + +G     W D W   G +I   G R   D   +  A ++E +
Subjt:  VGDGRRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFI

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.3e-1431.3Show/hide
Query:  VDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKG------RLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVW
        + VC P  EGGL +R    WN    LK++W + +  GSLWV W   + L+G         W+    V  SW+ + +LR R +    +   +G+G   R W
Subjt:  VDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKG------RLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGRRCRVW

Query:  LDPWLHGGAIIRQMG
         D W   G ++  +G
Subjt:  LDPWLHGGAIIRQMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGATGGTGCATTATGGAAGGGTAAGGAGGATGGGAGAGGGGGTGCGGAGGTTGCTTGGGTGGATGTGTGTCGCCCGTTTGAGGAAGGGGGTCTTAATATTCGGGA
GGGTAAGTCATGGAACGGTGCGTGTATCTTGAAGGTTCTTTGGTTGATGTTGACTAGTTCTGGGTCTCTGTGGGTTGCTTGGGTGGAAGTCTATATTCTGAAGGGGCGGT
TGTTGTGGTCTGTGGATAGTGGGGTTGGTCGGTCCTGGAGTCTTCGTGCTATTCTAAGGCATCGTGATATCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGGAGG
CGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGACAGATGGGTGAGAGGGTGGTCTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTCTGA
GTTCATTGGCTCGGATGGTGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGGGTCCGTCCTTGTTTGAGTATTGGGGATCGGT
GGGTGTGGGTTCCGGGTCGTCAGGGAGAGTTTTCGATTTCGAGTGCGTGGGAGGCTATTTGTCCTAGGAATGACAAAGTTTGTTGGGCTTGTCTGCTGTGGGTGGGGGGA
ATATTCCTAAACATTATTTTTGTGTGTGGCTTGTTATTAGGGATAGATTGGGCACTCCGGATAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGATGGTGCATTATGGAAGGGTAAGGAGGATGGGAGAGGGGGTGCGGAGGTTGCTTGGGTGGATGTGTGTCGCCCGTTTGAGGAAGGGGGTCTTAATATTCGGGA
GGGTAAGTCATGGAACGGTGCGTGTATCTTGAAGGTTCTTTGGTTGATGTTGACTAGTTCTGGGTCTCTGTGGGTTGCTTGGGTGGAAGTCTATATTCTGAAGGGGCGGT
TGTTGTGGTCTGTGGATAGTGGGGTTGGTCGGTCCTGGAGTCTTCGTGCTATTCTAAGGCATCGTGATATCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGGAGG
CGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGACAGATGGGTGAGAGGGTGGTCTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTCTGA
GTTCATTGGCTCGGATGGTGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGGGTCCGTCCTTGTTTGAGTATTGGGGATCGGT
GGGTGTGGGTTCCGGGTCGTCAGGGAGAGTTTTCGATTTCGAGTGCGTGGGAGGCTATTTGTCCTAGGAATGACAAAGTTTGTTGGGCTTGTCTGCTGTGGGTGGGGGGA
ATATTCCTAAACATTATTTTTGTGTGTGGCTTGTTATTAGGGATAGATTGGGCACTCCGGATAGGTTGA
Protein sequenceShow/hide protein sequence
MHDGALWKGKEDGRGGAEVAWVDVCRPFEEGGLNIREGKSWNGACILKVLWLMLTSSGSLWVAWVEVYILKGRLLWSVDSGVGRSWSLRAILRHRDILREHVHMEVGDGR
RCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLSEFIGSDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVWVPGRQGEFSISSAWEAICPRNDKVCWACLLWVGG
IFLNIIFVCGLLLGIDWALRIG