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PI0007086 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007086
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:4650156..4650512
RNA-Seq ExpressionPI0007086
SyntenyPI0007086
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046821.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.6e-5077.12Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEKS  G+FAD WP+LDN+S+LP+L VEIPLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G +TKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]5.9e-5076.27Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VE+PLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.4e-5077.97Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VEIPLS+GK+AWILQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.6e-5077.12Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEKS  G+FAD WP+LDN+S+LP+L VEIPLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G +TKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]7.6e-5076.27Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VE+PLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein3.7e-5076.27Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VE+PLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

A0A5A7TX42 Uncharacterized protein2.8e-5076.27Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VE+PLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

A0A5A7TZN9 Putative mitochondrial protein1.3e-5077.12Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEKS  G+FAD WP+LDN+S+LP+L VEIPLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G +TKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

A0A5A7UET3 Putative mitochondrial protein1.7e-5077.97Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEK   G+FAD WP LDN+S+LP+L VEIPLS+GK+AWILQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G VTKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

A0A5D3C267 Putative mitochondrial protein1.3e-5077.12Show/hide
Query:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW
        MVYF ERFLSG RHL IL+D+NQPR+DGLSL+VEKS  G+FAD WP+LDN+S+LP+L VEIPLS+GK+AW+LQSSIHNEAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRW

Query:  GAVTKVPGEFCFTNCYWE
        G +TKVPGEFCFT+CYWE
Subjt:  GAVTKVPGEFCFTNCYWE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCATCGAACGCTTCTTATCTGGAAATAGGCACCTTACAATCCTTACTGACAAGAATCAACCAAGAGACGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTTCTTTTGCAGATTTTTGGCCAAACTTAGACAACAGCTCGATTCTTCCCAAGCTACCTGTGGAGATACCTTTGTCTCAGGGAAAAAATGCATGGATCCTGCAAT
CTTCTATCCATAATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGTATAATTGAAGGCCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTAACTGTTATTGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCATCGAACGCTTCTTATCTGGAAATAGGCACCTTACAATCCTTACTGACAAGAATCAACCAAGAGACGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTTCTTTTGCAGATTTTTGGCCAAACTTAGACAACAGCTCGATTCTTCCCAAGCTACCTGTGGAGATACCTTTGTCTCAGGGAAAAAATGCATGGATCCTGCAAT
CTTCTATCCATAATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGTATAATTGAAGGCCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTAACTGTTATTGGGAGTGA
Protein sequenceShow/hide protein sequence
MVYFIERFLSGNRHLTILTDKNQPRDDGLSLLVEKSLTGSFADFWPNLDNSSILPKLPVEIPLSQGKNAWILQSSIHNEAPNANRVLTLGHRIIEGQTRWGAVTKVPGEF
CFTNCYWE