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PI0007108 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007108
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr10:5162443..5162640
RNA-Seq ExpressionPI0007108
SyntenyPI0007108
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]9.5e-1054.69Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE T+KEV SLK+MMLEMKK+ D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

KAA0062473.1 uncharacterized protein E6C27_scaffold130G00620 [Cucumis melo var. makuwa]9.5e-1056.25Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE TKKEV SLK+MMLEMKK+ D+ +++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]9.5e-1054.69Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE T+KEV SLK+MMLEMKK+ D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

XP_008447685.1 PREDICTED: uncharacterized protein LOC103490096 [Cucumis melo]1.2e-0956.25Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE  KKEV SLKKMMLEMKK  D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

XP_031745528.1 uncharacterized protein LOC116405915 [Cucumis sativus]7.3e-1058.73Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGK
        MA +QI+ R++ T+KE+  LK+M+LEMKKA ++M+EDL+E   Y+RR+ES TSDGS MKL+GK
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGK

TrEMBL top hitse value%identityAlignment
A0A1S3BIL2 uncharacterized protein LOC1034900966.0e-1056.25Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE  KKEV SLKKMMLEMKK  D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

A0A5A7TII1 Uncharacterized protein4.6e-1054.69Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE T+KEV SLK+MMLEMKK+ D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

A0A5D3C936 Transposon Tf2-1 polyprotein isoform X11.0e-0954.69Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++R++ TKKE+  LK+MMLEMKKA +++++++KE   YR+R+ES T DGS MKL+GKV
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

A0A5D3CXP0 Uncharacterized protein4.6e-1054.69Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE T+KEV SLK+MMLEMKK+ D+++++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

A0A5D3DVI3 Uncharacterized protein4.6e-1056.25Show/hide
Query:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV
        MA +Q+++RLE TKKEV SLK+MMLEMKK+ D+ +++L+E   Y++++ES TSDGS MK++GK+
Subjt:  MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATAAACAGATAGATAAAAGGCTGGAGAATACGAAAAAGGAAGTATCAAGTCTCAAAAAGATGATGCTCGAGATGAAGAAGGCATTCGACCAAATGTCTGAAGA
CTTAAAGGAGGGGAGTTTCTATAGGCGGAGGGATGAATCTAGAACTTCCGATGGATCTTTCATGAAACTCGAAGGAAAAGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATAAACAGATAGATAAAAGGCTGGAGAATACGAAAAAGGAAGTATCAAGTCTCAAAAAGATGATGCTCGAGATGAAGAAGGCATTCGACCAAATGTCTGAAGA
CTTAAAGGAGGGGAGTTTCTATAGGCGGAGGGATGAATCTAGAACTTCCGATGGATCTTTCATGAAACTCGAAGGAAAAGTGAATTAG
Protein sequenceShow/hide protein sequence
MANKQIDKRLENTKKEVSSLKKMMLEMKKAFDQMSEDLKEGSFYRRRDESRTSDGSFMKLEGKVN