; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007120 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007120
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine/arginine-rich splicing factor SR45a
Genome locationchr04:3467919..3471482
RNA-Seq ExpressionPI0007120
SyntenyPI0007120
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647621.1 hypothetical protein Csa_003197 [Cucumis sativus]1.2e-12197.55Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSP+RSPYRGA
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA

Query:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        REYSPRHSPPYGGGRSRRDHSRSPPPYSPPY GGSPDRRYPRGSR
Subjt:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

XP_016899368.1 PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo]2.3e-12597.93Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSP+RSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY

Query:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        SPRHSPPYGGGRSRRDHSRSPPPYSPPY GGSPDRRYPRGSR
Subjt:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

XP_022950652.1 serine/arginine-rich splicing factor SR45a [Cucurbita moschata]1.0e-11293.85Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        MAD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVE
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE
        PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYR GGSFREDYG+RRSP+RSPYRGARE
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE

Query:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        YSPRHS PPYGGGRSRRDHSRS PPYS PYGGGSPDRRYPRGSR
Subjt:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

XP_031743118.1 serine/arginine-rich splicing factor SR45a [Cucumis sativus]1.2e-12197.55Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSP+RSPYRGA
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA

Query:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        REYSPRHSPPYGGGRSRRDHSRSPPPYSPPY GGSPDRRYPRGSR
Subjt:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

XP_038881911.1 serine/arginine-rich splicing factor SR45a [Benincasa hispida]7.9e-11895.06Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HA+NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD+GYRGDRGSRYRGGGSFR+DYGYRRSP+RSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY

Query:  S-PRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        S PRHSPPY GGRSRRDHSRS PPY+PP  GGSPDRRYPRGSR
Subjt:  S-PRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

TrEMBL top hitse value%identityAlignment
A0A0A0KMM4 RRM domain-containing protein5.7e-12297.55Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR GGGSFREDYGYRRSP+RSPYRGA
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GGGSFREDYGYRRSPKRSPYRGA

Query:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        REYSPRHSPPYGGGRSRRDHSRSPPPYSPPY GGSPDRRYPRGSR
Subjt:  REYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

A0A1S4DTT1 serine/arginine-rich splicing factor SR45a1.1e-12597.93Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HANNPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY
        RTRISRGFAFVTMDNVDDANRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSP+RSPYRGAREY
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREY

Query:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        SPRHSPPYGGGRSRRDHSRSPPPYSPPY GGSPDRRYPRGSR
Subjt:  SPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

A0A6J1BUT3 serine/arginine-rich splicing factor SR45a isoform X17.2e-10991.8Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        MAD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+HA N GNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYR-GGGSFREDYGYRRSPKRSPYRGARE
        RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG RY  GGGSFREDYGYRRSP+RSPYRGARE
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYR-GGGSFREDYGYRRSPKRSPYRGARE

Query:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRY-PRGSR
        Y    SPPY GGRSRR+HSRS PPYSPPY  GSPDRRY PRG+R
Subjt:  YSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRY-PRGSR

A0A6J1GFF0 serine/arginine-rich splicing factor SR45a4.8e-11393.85Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        MAD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVE
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE
        PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYR GGSFREDYG+RRSP+RSPYRGARE
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE

Query:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        YSPRHS PPYGGGRSRRDHSRS PPYS PYGGGSPDRRYPRGSR
Subjt:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

A0A6J1INV2 serine/arginine-rich splicing factor SR45a4.8e-11393.85Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE
        MAD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVE
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVE

Query:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE
        PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYR GGSFREDYG+RRSP+RSPYRGARE
Subjt:  PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGARE

Query:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
        YSPRHS PPYGGGRSRRDHSRS PPYS PYGGGSPDRRYPRGSR
Subjt:  YSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

SwissProt top hitse value%identityAlignment
P62995 Transformer-2 protein homolog beta7.9e-2042.97Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   RG DRG          YRGG
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG

Query:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        G      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

P62996 Transformer-2 protein homolog beta7.9e-2042.97Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   RG DRG          YRGG
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG

Query:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        G      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

P62997 Transformer-2 protein homolog beta7.9e-2042.97Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   RG DRG          YRGG
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG

Query:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        G      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

Q3ZBT6 Transformer-2 protein homolog beta7.9e-2042.97Show/hide
Query:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK
        R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T                L V GLS   TERDL E FSK G 
Subjt:  RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT----------------LYVTGLSTRVTERDLEEHFSKEGK

Query:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG
        +A   +V + ++R SRGFAFV  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G  +      RD   RG DRG          YRGG
Subjt:  VASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKS-----TRDSGYRG-DRG--------SRYRGG

Query:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY
        G      G+R +  R      R  SP +S   GG RSR R  S SP  Y
Subjt:  GSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSR-RDHSRSPPPY

Q84TH4 Serine/arginine-rich splicing factor SR45a3.0e-3547.1Show/hide
Query:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP
        M+   R RYS S SP+    + R RS SRS  RS +RS S                   A NPGN+LYVTGLS RVTERDLE+HF+KEGKV    LV++P
Subjt:  MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEP

Query:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD-------SGYRGDRGSRYRG-------GGSFREDYGYR
         TR SRGF F++M +V DANRC++ L+ S+L+GR ITVEK+RR+R RTPTPG YLGL++ R        S  R    SR R        G S+   YG R
Subjt:  RTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD-------SGYRGDRGSRYRG-------GGSFREDYGYR

Query:  -RSPKRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
         RS   SP YR  R YSP  SP P      RRD S     YSP Y      R Y R  R
Subjt:  -RSPKRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

Arabidopsis top hitse value%identityAlignment
AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-6265.46Show/hide
Query:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MAD   R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSP
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    R+DY  RRSP+   
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSP

Query:  YRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
            R+YSPR        RS   H RSP   S      S  R  PRGSR
Subjt:  YRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-6465.46Show/hide
Query:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MAD   R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSP
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    R+DY  RRSP+   
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSP

Query:  YRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR
            R+YSPR        RS   H RSP   S      S  R  PRGSR
Subjt:  YRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGGSPDRRYPRGSR

AT4G35785.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-4774.83Show/hide
Query:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS
        MAD   R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR    NPG TLYVTGLSTRVT++DLE HF+KEGKVAS
Subjt:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVAS

Query:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        CFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  CFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.4 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-4367.9Show/hide
Query:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTE
        MAD   R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR                  RSRSRSRG E   NPG TLYVTGLSTRVT+
Subjt:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTE

Query:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        +DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK

AT4G35785.5 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-4367.9Show/hide
Query:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTE
        MAD   R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR                  RSRSRSRG E   NPG TLYVTGLSTRVT+
Subjt:  MAD-VHRKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG-----------------RSRSRSRGREHANNPGNTLYVTGLSTRVTE

Query:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK
        +DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Subjt:  RDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCAAGGCCCAGGTCCAGGTCCAG
ATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAACATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTA
CAAGAGTCACTGAAAGAGACCTTGAAGAGCACTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTT
GTGACGATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATATAACTGTGGAGAAGTCGCGGAGGAAACGGCCAAG
AACTCCAACGCCAGGGCACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGCGGCGATCGAGGTAGTAGGTATCGTGGTGGTGGCTCCTTCCGTGAAGACTATG
GGTATCGTCGGTCTCCAAAACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACATTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGGTCG
CCGCCACCTTACTCTCCTCCTTACGGCGGCGGGAGCCCGGATAGGAGGTATCCTCGTGGATCTAGGTGA
mRNA sequenceShow/hide mRNA sequence
AAGTGTGAGTGCACGATAAGTATAGCATGCACACAGTGTACCGGATAATTCTTTAAAAACAATACGGAAAAATTGTTCTCACAAACCCATAAAGTTTCTCACCTCGGGCT
CGCATAATTCACGACGGCGAGATTTCGAGTGCTGAGGCTCGTGGAGAGGTCGTCTTCAGAAACCCTAGAAACTCATTTCTGAATCAGTACTGTTCCTCAGCTTTTTCTGG
CCGCCATTTTTGTGTTGATCTCATTGTGAAAAAAATGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGAT
CTAGATCACGATCAAGGCCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAACATGCCAACAAC
CCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCACTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGA
GCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTGACGATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAGTCAATTCTAGAAGGTCGATATA
TAACTGTGGAGAAGTCGCGGAGGAAACGGCCAAGAACTCCAACGCCAGGGCACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGCGGCGATCGAGGTAGTAGG
TATCGTGGTGGTGGCTCCTTCCGTGAAGACTATGGGTATCGTCGGTCTCCAAAACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACATTCCCCCCCTTATGG
TGGGGGGAGATCAAGGAGGGATCACTCAAGGTCGCCGCCACCTTACTCTCCTCCTTACGGCGGCGGGAGCCCGGATAGGAGGTATCCTCGTGGATCTAGGTGAGGGTGAA
GCCCCTTTTAATGTACTTTTATGGTTGCTGTTAGTCAAGGACCAAGGTGGATGGTTGTGTGTACTCGAATCTGTCTCATAGTTGTAAGCAGTCCAACTTGCCGAATGGTC
ATCATCGTATGCTTTTTTAGTTCGGTGTTCTGTCTTTGTTCTAGTAAACTATATTGTTACAAATATTGGTATGTGTCTTTTGAATCTTAATTTTCGCTTTTATCACTGGG
GTTTATTTGCCGATATGGTAAATTAGTTTTCCCTTTCCATTTAAAGGCATTTTTACAATGCTTTATATTTTTATTTATTAAAGAATTATGGGTTGATCTTTAGGATAATG
TGAAAATACATCCAAAGTAATTTTAGATTGGTTTTCTTTATGATA
Protein sequenceShow/hide protein sequence
MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF
VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFREDYGYRRSPKRSPYRGAREYSPRHSPPYGGGRSRRDHSRS
PPPYSPPYGGGSPDRRYPRGSR