; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007139 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007139
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:6385744..6386139
RNA-Seq ExpressionPI0007139
SyntenyPI0007139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-3357.69Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VR L+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-3359.52Show/hide
Query:  MYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARCMRIL
        MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + MEY N+QL  I EWP  QRQDA+ TR E+VRQL+ IPEL+ +DR R MRI+
Subjt:  MYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARCMRIL

Query:  MRSVDDMKAFIDIPDEVKLDYCTVIL
        MR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRSVDDMKAFIDIPDEVKLDYCTVIL

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-3868.46Show/hide
Query:  MEIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRAR
        MEIP MYSQG+ M  DDIM  R  R +E R GSSGSKRK+GGQA+E  EII +VME++ND+LKAI+EW   QRQDAS    EVVRQLQ IPELSR DR R
Subjt:  MEIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRAR

Query:  CMRILMRSVDDMKAFIDIPDEVKLDYCTVI
         M+ILM +VDDMKAF+DI DE+KLDYCT+I
Subjt:  CMRILMRSVDDMKAFIDIPDEVKLDYCTVI

KAA0065892.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-3458.46Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VRQL+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

KAA0067571.1 retrotransposon protein [Cucumis melo var. makuwa]8.5e-3457.69Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE+R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VR L+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

TrEMBL top hitse value%identityAlignment
A0A5A7UME4 Retrotransposon protein7.0e-3457.69Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VR L+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

A0A5A7V469 Retrotransposon protein9.5e-3968.46Show/hide
Query:  MEIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRAR
        MEIP MYSQG+ M  DDIM  R  R +E R GSSGSKRK+GGQA+E  EII +VME++ND+LKAI+EW   QRQDAS    EVVRQLQ IPELSR DR R
Subjt:  MEIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRAR

Query:  CMRILMRSVDDMKAFIDIPDEVKLDYCTVI
         M+ILM +VDDMKAF+DI DE+KLDYCT+I
Subjt:  CMRILMRSVDDMKAFIDIPDEVKLDYCTVI

A0A5A7VC47 Retrotransposon protein2.4e-3458.46Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VRQL+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

A0A5A7VPS8 Retrotransposon protein4.1e-3457.69Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE+R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VR L+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

A0A5D3DPR5 Retrotransposon protein7.0e-3457.69Show/hide
Query:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC
        + P MYS GL MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+ + +EY N+QL  I EWP  QRQDA+ TR E+VR L+ IPEL+ +DR R 
Subjt:  EIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARC

Query:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL
        MRILMR+VDDMKAF+++PD +K  YC++IL
Subjt:  MRILMRSVDDMKAFIDIPDEVKLDYCTVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCCCGACGATGTACAGTCAGGGCCTGGGCATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGAGGCTAGGGCTGGTTCGAGCGGGTCGAA
GAGGAAACGGGGAGGGCAGGCATTGGAGGCGGCAGAAATTATTCACAGTGTCATGGAATATGCTAATGACCAACTTAAGGCCATTATAGAATGGCCCAAAGAACAACGGC
AAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTACAGGGAATCCCAGAGCTGAGTCGACTGGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGAT
GACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCACGGTCATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCCCGACGATGTACAGTCAGGGCCTGGGCATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGAGGCTAGGGCTGGTTCGAGCGGGTCGAA
GAGGAAACGGGGAGGGCAGGCATTGGAGGCGGCAGAAATTATTCACAGTGTCATGGAATATGCTAATGACCAACTTAAGGCCATTATAGAATGGCCCAAAGAACAACGGC
AAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTACAGGGAATCCCAGAGCTGAGTCGACTGGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGAT
GACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCACGGTCATACTCTAA
Protein sequenceShow/hide protein sequence
MEIPTMYSQGLGMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIHSVMEYANDQLKAIIEWPKEQRQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVD
DMKAFIDIPDEVKLDYCTVIL