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PI0007146 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007146
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:6620694..6621972
RNA-Seq ExpressionPI0007146
SyntenyPI0007146
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.6e-6569.35Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE   VSP+MMM TFG  YYDSGVGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR
        SSDFG GYYN +AG SS++FGQ YYDLG+DPSSSYMHGH RG G+HN+YLYY+VPAAVPE               Q D+QQQQEN EE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-6674.86Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        RLNN RLRD  NDPQQVL+ICN+NE Y++NI+ MY +PIVPAP+QRRRA VQE DELEEV+QH+EEVPPV QT+SE   VSPM+MM  FG  YYD GV Q
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQQQQQENQEELEQQRMQGRR
        SSDFG GYYNL  GPSSSNFGQ YYDLGT+PSSSYMHGH RG GEHN+YLYY  PAAV E+P++QQQQENQEEL+QQR+Q RR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQQQQQENQEELEQQRMQGRR

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.0e-6670.85Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RL +V +DPQQVL+ICNNNE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+ QT+SE   VSP+MMM TFG  YYDSGVGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQ---------------QQQQENQEELEQQRMQGRRR
        SSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPEQ D+               QQQQENQEE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQ---------------QQQQENQEELEQQRMQGRRR

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.8e-6670.85Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+ QTQSE   VSP+MMM TFG  YYDS VGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR
        SSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPE               Q D+QQQQENQEE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-6570.65Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPV--RQTQSEIGDVSPMMMMLTFGMRYYDSGV
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+   QTQSE   VSP+MMM TFG  YYDSGV
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPV--RQTQSEIGDVSPMMMMLTFGMRYYDSGV

Query:  GQSSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRR
        GQSSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPE               Q D+QQQQENQEE++QQR+Q RR
Subjt:  GQSSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRR

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein9.9e-6774.86Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        RLNN RLRD  NDPQQVL+ICN+NE Y++NI+ MY +PIVPAP+QRRRA VQE DELEEV+QH+EEVPPV QT+SE   VSPM+MM  FG  YYD GV Q
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQQQQQENQEELEQQRMQGRR
        SSDFG GYYNL  GPSSSNFGQ YYDLGT+PSSSYMHGH RG GEHN+YLYY  PAAV E+P++QQQQENQEEL+QQR+Q RR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQQQQQENQEELEQQRMQGRR

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein2.9e-6670.85Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RL +V +DPQQVL+ICNNNE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+ QT+SE   VSP+MMM TFG  YYDSGVGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQ---------------QQQQENQEELEQQRMQGRRR
        SSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPEQ D+               QQQQENQEE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQ---------------QQQQENQEELEQQRMQGRRR

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.8e-6670.85Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+ QTQSE   VSP+MMM TFG  YYDS VGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR
        SSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPE               Q D+QQQQENQEE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.2e-6569.35Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQSE   VSP+MMM TFG  YYDSGVGQ
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLTFGMRYYDSGVGQ

Query:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR
        SSDFG GYYN +AG SS++FGQ YYDLG+DPSSSYMHGH RG G+HN+YLYY+VPAAVPE               Q D+QQQQEN EE++QQR+Q RRR
Subjt:  SSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRRR

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-6570.65Show/hide
Query:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPV--RQTQSEIGDVSPMMMMLTFGMRYYDSGV
        R NN RLR+V +DPQQVL+ICN+NE YMENIH MY +PIVPAPVQRRR  VQEPD+LEEV+QH EEVPP+   QTQSE   VSP+MMM TFG  YYDSGV
Subjt:  RLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPV--RQTQSEIGDVSPMMMMLTFGMRYYDSGV

Query:  GQSSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRR
        GQSSDFG GYYN EAG SS++FGQ YYDLG+DPSSSYMHGH RG GEHN+YLYY+VPAAVPE               Q D+QQQQENQEE++QQR+Q RR
Subjt:  GQSSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPE---------------QPDQQQQQENQEELEQQRMQGRR

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACTTATGGTTCAAGTCTCTCAGTATAGGTACATGTTTGATCTTCTTCAACCTGATCAGAGGTTGAACAATAGTAGACTTCGGGATGTTACAAATGATCCCCA
ACAGGTCCTAGATATATGCAACAATAATGAGTGGTATATGGAGAACATACACTGTATGTACGTTATACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGC
AAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTGCCTCCTGTGAGACAAACACAGAGCGAGATTGGTGACGTTAGTCCAATGATGATGATGCTAACA
TTTGGAATGAGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGATAGGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTA
CGATTTAGGGACTGATCCATCATCTTCATACATGCATGGACATAGGCGTGGTTGTGGAGAACATAACGACTATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAGC
CAGATCAGCAACAACAACAAGAGAATCAAGAGGAACTAGAGCAACAAAGAATGCAGGGTCGACGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAACTTATGGTTCAAGTCTCTCAGTATAGGTACATGTTTGATCTTCTTCAACCTGATCAGAGGTTGAACAATAGTAGACTTCGGGATGTTACAAATGATCCCCA
ACAGGTCCTAGATATATGCAACAATAATGAGTGGTATATGGAGAACATACACTGTATGTACGTTATACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGC
AAGAGCCTGATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTGCCTCCTGTGAGACAAACACAGAGCGAGATTGGTGACGTTAGTCCAATGATGATGATGCTAACA
TTTGGAATGAGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGATAGGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTA
CGATTTAGGGACTGATCCATCATCTTCATACATGCATGGACATAGGCGTGGTTGTGGAGAACATAACGACTATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAGC
CAGATCAGCAACAACAACAAGAGAATCAAGAGGAACTAGAGCAACAAAGAATGCAGGGTCGACGAAGATAA
Protein sequenceShow/hide protein sequence
MDKLMVQVSQYRYMFDLLQPDQRLNNSRLRDVTNDPQQVLDICNNNEWYMENIHCMYVIPIVPAPVQRRRARVQEPDELEEVEQHVEEVPPVRQTQSEIGDVSPMMMMLT
FGMRYYDSGVGQSSDFGIGYYNLEAGPSSSNFGQGYYDLGTDPSSSYMHGHRRGCGEHNDYLYYKVPAAVPEQPDQQQQQENQEELEQQRMQGRRR