; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007157 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007157
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:16839626..16839814
RNA-Seq ExpressionPI0007157
SyntenyPI0007157
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052248.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-0761.11Show/hide
Query:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        M+F  MYSQGL+MSPD++MGTR  R+S+ R  SSGSKRKR GQA    E+I +A
Subjt:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-0967.92Show/hide
Query:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
        ME PMMYSQG+DM  DDIMGTRP R +EGR  SSGSKRK+ GQA +  EII +
Subjt:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
KAA0060558.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-0760.78Show/hide
Query:  FPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
        F +MYSQGL+MSPD++MGTR  R+SEGR  SSGSKRKR GQA    +++ +
Subjt:  FPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]6.5e-0862.26Show/hide
Query:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        +FP MYSQGL+MSPDD+MGTR  R+SE R  SSGSKRKR G A    +I+ +A
Subjt:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
TYK10954.1 retrotransposon protein [Cucumis melo var. makuwa]6.5e-0862.26Show/hide
Query:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        +FP MYSQGL+MSPDD+MGTR  R+SE R  SSGSKRKR G A    +I+ +A
Subjt:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
TrEMBL top hitse value%identityAlignment
A0A5A7V469 Retrotransposon protein1.7e-0967.92Show/hide
Query:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
        ME PMMYSQG+DM  DDIMGTRP R +EGR  SSGSKRK+ GQA +  EII +
Subjt:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
A0A5A7VBC5 Retrotransposon protein3.1e-0862.26Show/hide
Query:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        +FP MYSQGL+MSPDD+MGTR  R+SE R  SSGSKRKR G A    +I+ +A
Subjt:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
A0A5D3BRF0 Retrotransposon protein9.1e-0860.78Show/hide
Query:  FPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
        F +MYSQGL+MSPD++MGTR  R+SEGR  SSGSKRKR GQA    +++ +
Subjt:  FPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHS
A0A5D3BSM9 Retrotransposon protein7.0e-0861.11Show/hide
Query:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        M+F  MYSQGL+MSPD++MGTR  R+S+ R  SSGSKRKR GQA    E+I +A
Subjt:  MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
A0A5D3CIF5 Retrotransposon protein3.1e-0862.26Show/hide
Query:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
        +FP MYSQGL+MSPDD+MGTR  R+SE R  SSGSKRKR G A    +I+ +A
Subjt:  EFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCCCCATGATGTACAGTCAAGGACTGGACATGTCACCTGACGACATAATGGGCACACGACCCGGTCGGTTGTCTGAGGGTAGGGCTTGTTCGAGCGGTTCGAA
GAGGAAACGGGAAGGGCAGGCGTTCAAGATGGCGGAAATTATTCATAGTGCCAAGCGTGACACGTGCGGAAGTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCCCCATGATGTACAGTCAAGGACTGGACATGTCACCTGACGACATAATGGGCACACGACCCGGTCGGTTGTCTGAGGGTAGGGCTTGTTCGAGCGGTTCGAA
GAGGAAACGGGAAGGGCAGGCGTTCAAGATGGCGGAAATTATTCATAGTGCCAAGCGTGACACGTGCGGAAGTCGTTAG
Protein sequenceShow/hide protein sequence
MEFPMMYSQGLDMSPDDIMGTRPGRLSEGRACSSGSKRKREGQAFKMAEIIHSAKRDTCGSR