; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007173 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007173
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr10:11371785..11372402
RNA-Seq ExpressionPI0007173
SyntenyPI0007173
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]3.8e-1242.97Show/hide
Query:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN
        ++SE+ TL L   S + + L+++IDDP  K  Q   E+A +TR PSPPKQ+      +T+Q  A+  +++DDE ++K+INE +++P+  GFE VFQ QAN
Subjt:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN

Query:  LQERMTKHEKQIMDLETKIDNY---HQA
        LQE   +++K + DLE K D+    HQA
Subjt:  LQERMTKHEKQIMDLETKIDNY---HQA

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]6.4e-1256.41Show/hide
Query:  GETRAPSPPKQTETQQNNAVEENDDEE-FYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDNYHQ
        GET AP P KQ   QQ NA  E+D+E+ ++K+I +   KP+MDGF+ VFQNQ +LQE   +HEKQI DLE KIDN +Q
Subjt:  GETRAPSPPKQTETQQNNAVEENDDEE-FYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDNYHQ

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]3.3e-0831.12Show/hide
Query:  EDYRKSEDATLA-LESQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMT
        ++ +  +DA L  + S +   L+++IDD   K  Q   E  G+T  PSPPKQ   QQ+   E +D++E+ K+                            
Subjt:  EDYRKSEDATLA-LESQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMT

Query:  KHEKQIMDLETKIDNYHQAQHDQLAYEIASLKDQNKAMVNLIKKASLRSDRQYKSMMNYIHVAITSLVPKPAIPFEFENPLSDTELD--AATRPSE
        K E  I  L+T+ +               +++ Q + M   IK+ASL ++ Q +++MNYIHV I SLVP P  P E E PL++ E    AA  PSE
Subjt:  KHEKQIMDLETKIDNYHQAQHDQLAYEIASLKDQNKAMVNLIKKASLRSDRQYKSMMNYIHVAITSLVPKPAIPFEFENPLSDTELD--AATRPSE

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]1.0e-0946.3Show/hide
Query:  PSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDN---YHQAQHDQLAYEIASLKDQNKAMVNLIK
        PSPPK              D+E++K+I     KPM DGFE +FQ QANLQE M + +KQ+ +LE +IDN    HQAQ D +  +I SLK QN+A+  LIK
Subjt:  PSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDN---YHQAQHDQLAYEIASLKDQNKAMVNLIK

Query:  KASLRSDR
        +AS +++R
Subjt:  KASLRSDR

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]3.8e-1242.97Show/hide
Query:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN
        ++SE+ TL L   S + + L+++IDDP  K  Q   E+A +TR PSPPKQ+      +T+Q  A+  +++DDE ++K+INE +++P+  GFE VFQ QAN
Subjt:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN

Query:  LQERMTKHEKQIMDLETKIDNY---HQA
        LQE   +++K + DLE K D+    HQA
Subjt:  LQERMTKHEKQIMDLETKIDNY---HQA

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein1.8e-1242.97Show/hide
Query:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN
        ++SE+ TL L   S + + L+++IDDP  K  Q   E+A +TR PSPPKQ+      +T+Q  A+  +++DDE ++K+INE +++P+  GFE VFQ QAN
Subjt:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN

Query:  LQERMTKHEKQIMDLETKIDNY---HQA
        LQE   +++K + DLE K D+    HQA
Subjt:  LQERMTKHEKQIMDLETKIDNY---HQA

A0A5A7U0L9 Uncharacterized protein3.1e-1256.41Show/hide
Query:  GETRAPSPPKQTETQQNNAVEENDDEE-FYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDNYHQ
        GET AP P KQ   QQ NA  E+D+E+ ++K+I +   KP+MDGF+ VFQNQ +LQE   +HEKQI DLE KIDN +Q
Subjt:  GETRAPSPPKQTETQQNNAVEENDDEE-FYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDNYHQ

A0A5A7VKU1 Uncharacterized protein1.6e-0831.12Show/hide
Query:  EDYRKSEDATLA-LESQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMT
        ++ +  +DA L  + S +   L+++IDD   K  Q   E  G+T  PSPPKQ   QQ+   E +D++E+ K+                            
Subjt:  EDYRKSEDATLA-LESQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMT

Query:  KHEKQIMDLETKIDNYHQAQHDQLAYEIASLKDQNKAMVNLIKKASLRSDRQYKSMMNYIHVAITSLVPKPAIPFEFENPLSDTELD--AATRPSE
        K E  I  L+T+ +               +++ Q + M   IK+ASL ++ Q +++MNYIHV I SLVP P  P E E PL++ E    AA  PSE
Subjt:  KHEKQIMDLETKIDNYHQAQHDQLAYEIASLKDQNKAMVNLIKKASLRSDRQYKSMMNYIHVAITSLVPKPAIPFEFENPLSDTELD--AATRPSE

A0A5D3DS12 Uncharacterized protein5.0e-1046.3Show/hide
Query:  PSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDN---YHQAQHDQLAYEIASLKDQNKAMVNLIK
        PSPPK              D+E++K+I     KPM DGFE +FQ QANLQE M + +KQ+ +LE +IDN    HQAQ D +  +I SLK QN+A+  LIK
Subjt:  PSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMTKHEKQIMDLETKIDN---YHQAQHDQLAYEIASLKDQNKAMVNLIK

Query:  KASLRSDR
        +AS +++R
Subjt:  KASLRSDR

A0A5D3E1H0 Uncharacterized protein1.8e-1242.97Show/hide
Query:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN
        ++SE+ TL L   S + + L+++IDDP  K  Q   E+A +TR PSPPKQ+      +T+Q  A+  +++DDE ++K+INE +++P+  GFE VFQ QAN
Subjt:  RKSEDATLALE--SQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQT------ETQQNNAV--EENDDEEFYKYINEAIAKPMMDGFEGVFQNQAN

Query:  LQERMTKHEKQIMDLETKIDNY---HQA
        LQE   +++K + DLE K D+    HQA
Subjt:  LQERMTKHEKQIMDLETKIDNY---HQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTACGACACTGAATTTGAAGATTATAGAAAATCTGAGGACGCGACATTGGCCCTTGAGTCGCAGCAAACCGTCTTTCTTGACGAGTCGATTGATGACCC
ACCTCCTAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGACACGAGCTCCTTCGCCACCAAAGCAAACTGAAACTCAACAAAACAACGCGGTGGAAGAGAACGACG
ATGAAGAATTCTACAAGTACATCAATGAGGCAATCGCCAAGCCAATGATGGATGGATTTGAAGGTGTTTTTCAAAACCAAGCCAATCTGCAAGAACGCATGACGAAACAT
GAAAAGCAGATCATGGACTTGGAAACAAAAATAGACAACTATCATCAAGCTCAGCACGATCAGCTCGCATATGAAATCGCGAGCCTTAAGGATCAAAACAAGGCGATGGT
GAATTTGATCAAGAAGGCTTCCCTGCGGTCTGACAGGCAATACAAGTCAATGATGAATTACATCCACGTGGCCATCACAAGCCTCGTGCCCAAGCCTGCCATTCCGTTTG
AATTCGAAAATCCCCTTTCTGACACTGAATTGGACGCCGCGACAAGACCTTCCGAAACGCAGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTACGACACTGAATTTGAAGATTATAGAAAATCTGAGGACGCGACATTGGCCCTTGAGTCGCAGCAAACCGTCTTTCTTGACGAGTCGATTGATGACCC
ACCTCCTAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGACACGAGCTCCTTCGCCACCAAAGCAAACTGAAACTCAACAAAACAACGCGGTGGAAGAGAACGACG
ATGAAGAATTCTACAAGTACATCAATGAGGCAATCGCCAAGCCAATGATGGATGGATTTGAAGGTGTTTTTCAAAACCAAGCCAATCTGCAAGAACGCATGACGAAACAT
GAAAAGCAGATCATGGACTTGGAAACAAAAATAGACAACTATCATCAAGCTCAGCACGATCAGCTCGCATATGAAATCGCGAGCCTTAAGGATCAAAACAAGGCGATGGT
GAATTTGATCAAGAAGGCTTCCCTGCGGTCTGACAGGCAATACAAGTCAATGATGAATTACATCCACGTGGCCATCACAAGCCTCGTGCCCAAGCCTGCCATTCCGTTTG
AATTCGAAAATCCCCTTTCTGACACTGAATTGGACGCCGCGACAAGACCTTCCGAAACGCAGCTATAA
Protein sequenceShow/hide protein sequence
MQDLYDTEFEDYRKSEDATLALESQQTVFLDESIDDPPPKENQTTLEEAGETRAPSPPKQTETQQNNAVEENDDEEFYKYINEAIAKPMMDGFEGVFQNQANLQERMTKH
EKQIMDLETKIDNYHQAQHDQLAYEIASLKDQNKAMVNLIKKASLRSDRQYKSMMNYIHVAITSLVPKPAIPFEFENPLSDTELDAATRPSETQL