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PI0007192 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007192
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationchr04:6944418..6944960
RNA-Seq ExpressionPI0007192
SyntenyPI0007192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054681.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]1.8e-0839.86Show/hide
Query:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT
        MGKFKIDRK+F V L GK RKIYIEERNG +    E+               + G I   FG   GW     L         V +P K R +KG  GS+ 
Subjt:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT

Query:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
                   +G   RS     DVGKK+++  GKEV FAFEW
Subjt:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
TYK08591.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-0839.86Show/hide
Query:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT
        MGKFKIDRK+F V L GK RKIYIEERNG +    E+               + G I   FG   GW     L         V +P K R +KG  GS+ 
Subjt:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT

Query:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
                   +G   RS     DVGKK+++  GKEV FAFEW
Subjt:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
TrEMBL top hitse value%identityAlignment
A0A5A7UMB2 Retrotransposon protein, putative, unclassified8.6e-0939.86Show/hide
Query:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT
        MGKFKIDRK+F V L GK RKIYIEERNG +    E+               + G I   FG   GW     L         V +P K R +KG  GS+ 
Subjt:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT

Query:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
                   +G   RS     DVGKK+++  GKEV FAFEW
Subjt:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
A0A5D3C9P5 Ty3/gypsy retrotransposon protein8.6e-0939.86Show/hide
Query:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT
        MGKFKIDRK+F V L GK RKIYIEERNG +    E+               + G I   FG   GW     L         V +P K R +KG  GS+ 
Subjt:  MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEI--------------GSEGDINVTFG---GWKGDQKLVS-------VNQPAKIRKKKGTEGSKT

Query:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
                   +G   RS     DVGKK+++  GKEV FAFEW
Subjt:  PV---------EGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTTCAAGATAGATAGGAAGGAATTCTCGGTGAGGTTGGTGGGGAAGAGTAGGAAGATTTATATTGAGGAAAGAAATGGGGGGCAAAGGAAAGGGTTTGAGAT
CGGTAGCGAAGGAGATATCAATGTTACTTTTGGGGGGTGGAAGGGCGATCAGAAGCTGGTTTCAGTTAACCAACCAGCGAAGATCCGAAAGAAGAAAGGGACAGAAGGAT
CTAAGACACCGGTGGAGGGTCTCGTTTCGAGAAGTGATCATAAGATCGGGGATGTGGGGAAAAAGATATCGGAAGAAAAAGGAAAGGAGGTGGAATTCGCATTTGAATGG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTTCAAGATAGATAGGAAGGAATTCTCGGTGAGGTTGGTGGGGAAGAGTAGGAAGATTTATATTGAGGAAAGAAATGGGGGGCAAAGGAAAGGGTTTGAGAT
CGGTAGCGAAGGAGATATCAATGTTACTTTTGGGGGGTGGAAGGGCGATCAGAAGCTGGTTTCAGTTAACCAACCAGCGAAGATCCGAAAGAAGAAAGGGACAGAAGGAT
CTAAGACACCGGTGGAGGGTCTCGTTTCGAGAAGTGATCATAAGATCGGGGATGTGGGGAAAAAGATATCGGAAGAAAAAGGAAAGGAGGTGGAATTCGCATTTGAATGG
TAG
Protein sequenceShow/hide protein sequence
MGKFKIDRKEFSVRLVGKSRKIYIEERNGGQRKGFEIGSEGDINVTFGGWKGDQKLVSVNQPAKIRKKKGTEGSKTPVEGLVSRSDHKIGDVGKKISEEKGKEVEFAFEW