; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007204 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007204
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr04:2526575..2527770
RNA-Seq ExpressionPI0007204
SyntenyPI0007204
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052740.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-5942.86Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA
        M SSSL RRLHG+FN SRS TP FNKP  S PSSATKK NKS               +V RFIKNSES+RFR+ K  YD TVR+LAVRKNFSMIEDIIEA
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA

Query:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------
        QKKYEEIK+EGFATRLIKLYGKA                                                                             
Subjt:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------DG
                                                                                                          DG
Subjt:  --------------------------------------------------------------------------------------------------DG

Query:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        +LEEAKK Y K KESEV PNA+TYKTLLP LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAEVSK+EEAK+LVELYNS   L FKLK P+ ST
Subjt:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

TYK13084.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.5e-6143.22Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        MSSSSL RRLHG+FN SRS T +FNKP LS PSSATKKSNKSP             +  +FIKNSES+ FRRKK  YD T+RLLAVRK+FSMIEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IKDEGFATRLI LYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWY KLKESEV PNASTY TLL  LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAE SK+EEA DLVELYNS +KL FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

XP_008439937.1 PREDICTED: pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Cucumis melo]1.5e-6143.22Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        MSSSSL RRLHG+FN SRS T +FNKP LS PSSATKKSNKSP             +  +FIKNSES+ FRRKK  YD T+RLLAVRK+FSMIEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IKDEGFATRLI LYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWY KLKESEV PNASTY TLL  LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAE SK+EEA DLVELYNS +KL FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

XP_008441088.2 PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like [Cucumis melo]1.4e-5942.86Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA
        M SSSL RRLHG+FN SRS TP FNKP  S PSSATKK NKS               +V RFIKNSES+RFR+ K  YD TVR+LAVRKNFSMIEDIIEA
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA

Query:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------
        QKKYEEIK+EGFATRLIKLYGKA                                                                             
Subjt:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------DG
                                                                                                          DG
Subjt:  --------------------------------------------------------------------------------------------------DG

Query:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        +LEEAKK Y K KESEV PNA+TYKTLLP LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAEVSK+EEAK+LVELYNS   L FKLK P+ ST
Subjt:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

XP_031742914.1 pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Cucumis sativus]3.6e-5841.71Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        M SSSL RRLHG+FN SRS T  FNK   S PSSAT+K NKS              +V +FIKN+ES+RFR +K  YDSTVRLLAVRK FS+IEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IK EGFATRLIKLYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWYYKLKESEV+P A+TY+ LLP LCEQGDFDSGLQLCKEAID G V HTAEVQRVV+GLAEVSKIEEAKDLVELYNSK  L FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

TrEMBL top hitse value%identityAlignment
A0A0A0KLB2 Uncharacterized protein1.4e-6346.89Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        M SSSL RRLHG+FN SRS T  FNK   S PSSAT+K NKS              +V +FIKN+ES+RFR +K  YDSTVRLLAVRK FS+IEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IK EGFATRLIKLYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -----------------------------------------------------DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCK
                                                             DG+LEEAKKWYYKLKESEV+P A+TY+ LLP LCEQGDFDSGLQLCK
Subjt:  -----------------------------------------------------DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCK

Query:  EAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        EAID G V HTAEVQRVVDGLAEVSK EEAKDLVELYNSK  L FKLK P+ ST
Subjt:  EAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

A0A1S3AZY0 pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like7.5e-6243.22Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        MSSSSL RRLHG+FN SRS T +FNKP LS PSSATKKSNKSP             +  +FIKNSES+ FRRKK  YD T+RLLAVRK+FSMIEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IKDEGFATRLI LYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWY KLKESEV PNASTY TLL  LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAE SK+EEA DLVELYNS +KL FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

A0A5A7UC35 Pentatricopeptide repeat-containing protein7.0e-6042.86Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA
        M SSSL RRLHG+FN SRS TP FNKP  S PSSATKK NKS               +V RFIKNSES+RFR+ K  YD TVR+LAVRKNFSMIEDIIEA
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP--------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEA

Query:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------
        QKKYEEIK+EGFATRLIKLYGKA                                                                             
Subjt:  QKKYEEIKDEGFATRLIKLYGKA-----------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------------------DG
                                                                                                          DG
Subjt:  --------------------------------------------------------------------------------------------------DG

Query:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        +LEEAKK Y K KESEV PNA+TYKTLLP LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAEVSK+EEAK+LVELYNS   L FKLK P+ ST
Subjt:  NLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

A0A5A7UGU3 Pentatricopeptide repeat-containing protein7.5e-6243.22Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        MSSSSL RRLHG+FN SRS T +FNKP LS PSSATKKSNKSP             +  +FIKNSES+ FRRKK  YD T+RLLAVRK+FSMIEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IKDEGFATRLI LYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWY KLKESEV PNASTY TLL  LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAE SK+EEA DLVELYNS +KL FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

A0A5D3CPX8 Pentatricopeptide repeat-containing protein7.5e-6243.22Show/hide
Query:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ
        MSSSSL RRLHG+FN SRS T +FNKP LS PSSATKKSNKSP             +  +FIKNSES+ FRRKK  YD T+RLLAVRK+FSMIEDIIEAQ
Subjt:  MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSP-------------VVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQ

Query:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------
        KKYE+IKDEGFATRLI LYGKA                                                                              
Subjt:  KKYEEIKDEGFATRLIKLYGKA------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------DGN
                                                                                                         DG+
Subjt:  -------------------------------------------------------------------------------------------------DGN

Query:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST
        LEEAKKWY KLKESEV PNASTY TLL  LCEQGDFD GLQLCKEAIDNGLV HTAEVQRVVDGLAE SK+EEA DLVELYNS +KL FKLK P+ ST
Subjt:  LEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial4.2e-0931.62Show/hide
Query:  KDVYDSTVRLLAVRKNFSMIEDIIEAQKKYEEIKDEGFA------TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQL
        +D+    +   A+   F  I D++EA K + E+  +G        T LI  Y KA G++++A + +  + ++  +PN  TY TL+  LC++GD DS  +L
Subjt:  KDVYDSTVRLLAVRKNFSMIEDIIEAQKKYEEIKDEGFA------TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQL

Query:  CKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLV
          E    GL  +      +V+GL +   IEEA  LV
Subjt:  CKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLV

Q8LE47 Pentatricopeptide repeat-containing protein At1g61870, mitochondrial4.9e-1036.17Show/hide
Query:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKL
        + + EEAKK +  +      P++  Y TL+ +LC+ GDF++ L LCKE+++   V   + ++ +V+GLA+ SK+EEAK+L+     K   N +L
Subjt:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKL

Q9LG23 Pentatricopeptide repeat-containing protein At1g55890, mitochondrial5.6e-1430.62Show/hide
Query:  SSLCRRLHGLFN---------------QSRSSTPVFNKPELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQK
        SSL R L G FN               +  + T   + P+ S  S    + N   +V++F K  ESERFR    VYD TVR L   K    +E+I+E QK
Subjt:  SSLCRRLHGLFN---------------QSRSSTPVFNKPELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQK

Query:  KYEEIKDEGFATRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDN-GLVLHTAEVQRVVDGLAEVSKIEEAK
        KY ++  EGFA R+I LYGKA G  E A+K + ++   +   +  ++  LL        FD   +L  E      +         ++  L E   + EA 
Subjt:  KYEEIKDEGFATRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDN-GLVLHTAEVQRVVDGLAEVSKIEEAK

Query:  DLVELYNSK
         L++   +K
Subjt:  DLVELYNSK

Q9LG23 Pentatricopeptide repeat-containing protein At1g55890, mitochondrial3.4e-1132.32Show/hide
Query:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEK
        +G ++EA+ WY ++ +    P+ +T+  LLP +C+ GDF+S ++L KE      ++    +Q++VD L + SK EEA+++V++  +   L  KL  P +
Subjt:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEK

Q9LK57 Pentatricopeptide repeat-containing protein At3g13160, mitochondrial4.7e-1333.55Show/hide
Query:  KKDVYDSTVRLLAVRKNFSMIEDIIEAQK-KYEEIKDEGFA-TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKE
        K+D+     RLL +       E +    K K  E+K + F  T +IK +  ++G L+EA  WY +++++   P    + +LLP +C+ GD +S  +LCKE
Subjt:  KKDVYDSTVRLLAVRKNFSMIEDIIEAQK-KYEEIKDEGFA-TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKE

Query:  AIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLK-FPEK
             L++  A +Q VVD L + SK +EA+++VEL  +   L  KL+ FP++
Subjt:  AIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLK-FPEK

Q9LK58 Pentatricopeptide repeat-containing protein At3g131506.9e-1226.61Show/hide
Query:  SSLCRRLHGLFNQSRSSTPVFNKP------------------------ELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSM
        SSL  RLHG+F +S  +T    KP                        + S  +  +K S  +  V++F ++ ESE FR+   +Y + +R L   K FS 
Subjt:  SSLCRRLHGLFNQSRSSTPVFNKP------------------------ELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSM

Query:  IEDIIEAQKKYEEIKDEGFATRLIKLYGKA----------------------------------DGNLEEAKKWYYKLKES-EVNPNASTYKTLLPFLCE
        I+++++ QKK+++IK E F  R++ LYG +                                     L+EA K + +L E   + P+  TY T++  LC 
Subjt:  IEDIIEAQKKYEEIKDEGFATRLIKLYGKA----------------------------------DGNLEEAKKWYYKLKES-EVNPNASTYKTLLPFLCE

Query:  QGDFDSGLQLCKEAIDNG
        +G  D  L + +E   NG
Subjt:  QGDFDSGLQLCKEAIDNG

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.0e-1031.62Show/hide
Query:  KDVYDSTVRLLAVRKNFSMIEDIIEAQKKYEEIKDEGFA------TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQL
        +D+    +   A+   F  I D++EA K + E+  +G        T LI  Y KA G++++A + +  + ++  +PN  TY TL+  LC++GD DS  +L
Subjt:  KDVYDSTVRLLAVRKNFSMIEDIIEAQKKYEEIKDEGFA------TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQL

Query:  CKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLV
          E    GL  +      +V+GL +   IEEA  LV
Subjt:  CKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLV

AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.0e-1530.62Show/hide
Query:  SSLCRRLHGLFN---------------QSRSSTPVFNKPELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQK
        SSL R L G FN               +  + T   + P+ S  S    + N   +V++F K  ESERFR    VYD TVR L   K    +E+I+E QK
Subjt:  SSLCRRLHGLFN---------------QSRSSTPVFNKPELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQK

Query:  KYEEIKDEGFATRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDN-GLVLHTAEVQRVVDGLAEVSKIEEAK
        KY ++  EGFA R+I LYGKA G  E A+K + ++   +   +  ++  LL        FD   +L  E      +         ++  L E   + EA 
Subjt:  KYEEIKDEGFATRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDN-GLVLHTAEVQRVVDGLAEVSKIEEAK

Query:  DLVELYNSK
         L++   +K
Subjt:  DLVELYNSK

AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-1232.32Show/hide
Query:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEK
        +G ++EA+ WY ++ +    P+ +T+  LLP +C+ GDF+S ++L KE      ++    +Q++VD L + SK EEA+++V++  +   L  KL  P +
Subjt:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEK

AT1G61870.1 pentatricopeptide repeat 3363.5e-1136.17Show/hide
Query:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKL
        + + EEAKK +  +      P++  Y TL+ +LC+ GDF++ L LCKE+++   V   + ++ +V+GLA+ SK+EEAK+L+     K   N +L
Subjt:  DGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKL

AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.9e-1326.61Show/hide
Query:  SSLCRRLHGLFNQSRSSTPVFNKP------------------------ELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSM
        SSL  RLHG+F +S  +T    KP                        + S  +  +K S  +  V++F ++ ESE FR+   +Y + +R L   K FS 
Subjt:  SSLCRRLHGLFNQSRSSTPVFNKP------------------------ELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSM

Query:  IEDIIEAQKKYEEIKDEGFATRLIKLYGKA----------------------------------DGNLEEAKKWYYKLKES-EVNPNASTYKTLLPFLCE
        I+++++ QKK+++IK E F  R++ LYG +                                     L+EA K + +L E   + P+  TY T++  LC 
Subjt:  IEDIIEAQKKYEEIKDEGFATRLIKLYGKA----------------------------------DGNLEEAKKWYYKLKES-EVNPNASTYKTLLPFLCE

Query:  QGDFDSGLQLCKEAIDNG
        +G  D  L + +E   NG
Subjt:  QGDFDSGLQLCKEAIDNG

AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-1433.55Show/hide
Query:  KKDVYDSTVRLLAVRKNFSMIEDIIEAQK-KYEEIKDEGFA-TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKE
        K+D+     RLL +       E +    K K  E+K + F  T +IK +  ++G L+EA  WY +++++   P    + +LLP +C+ GD +S  +LCKE
Subjt:  KKDVYDSTVRLLAVRKNFSMIEDIIEAQK-KYEEIKDEGFA-TRLIKLYGKADGNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKE

Query:  AIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLK-FPEK
             L++  A +Q VVD L + SK +EA+++VEL  +   L  KL+ FP++
Subjt:  AIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLK-FPEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCTTCCCTCTGCCGTCGTCTCCATGGCCTCTTCAACCAATCTCGTTCCAGCACACCCGTATTCAACAAACCCGAACTGTCGCGTCCTTCTTCAGCTACCAA
AAAATCCAACAAATCTCCCGTCGTTAAGAGGTTCATTAAGAACTCCGAGTCCGAACGATTCCGCCGCAAGAAAGATGTCTATGATTCTACAGTTCGCCTTCTTGCTGTCC
GTAAAAATTTTTCCATGATTGAAGATATTATAGAAGCCCAGAAGAAGTATGAGGAAATTAAAGATGAAGGATTCGCGACCCGCCTCATTAAGCTCTATGGGAAAGCGGAT
GGGAATTTGGAGGAAGCCAAAAAATGGTATTACAAATTGAAGGAGAGTGAAGTTAATCCAAATGCATCGACTTACAAGACACTTCTCCCCTTCCTTTGCGAGCAGGGTGA
TTTTGATTCTGGACTTCAGCTGTGCAAGGAGGCCATTGATAATGGATTAGTTCTTCATACAGCGGAGGTGCAGCGTGTGGTTGATGGATTGGCTGAAGTTTCCAAGATTG
AAGAAGCAAAGGACCTTGTGGAGCTCTATAATTCTAAGACTAAGTTAAATTTCAAATTGAAATTTCCTGAGAAGAGCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCTTCCCTCTGCCGTCGTCTCCATGGCCTCTTCAACCAATCTCGTTCCAGCACACCCGTATTCAACAAACCCGAACTGTCGCGTCCTTCTTCAGCTACCAA
AAAATCCAACAAATCTCCCGTCGTTAAGAGGTTCATTAAGAACTCCGAGTCCGAACGATTCCGCCGCAAGAAAGATGTCTATGATTCTACAGTTCGCCTTCTTGCTGTCC
GTAAAAATTTTTCCATGATTGAAGATATTATAGAAGCCCAGAAGAAGTATGAGGAAATTAAAGATGAAGGATTCGCGACCCGCCTCATTAAGCTCTATGGGAAAGCGGAT
GGGAATTTGGAGGAAGCCAAAAAATGGTATTACAAATTGAAGGAGAGTGAAGTTAATCCAAATGCATCGACTTACAAGACACTTCTCCCCTTCCTTTGCGAGCAGGGTGA
TTTTGATTCTGGACTTCAGCTGTGCAAGGAGGCCATTGATAATGGATTAGTTCTTCATACAGCGGAGGTGCAGCGTGTGGTTGATGGATTGGCTGAAGTTTCCAAGATTG
AAGAAGCAAAGGACCTTGTGGAGCTCTATAATTCTAAGACTAAGTTAAATTTCAAATTGAAATTTCCTGAGAAGAGCACTTGA
Protein sequenceShow/hide protein sequence
MSSSSLCRRLHGLFNQSRSSTPVFNKPELSRPSSATKKSNKSPVVKRFIKNSESERFRRKKDVYDSTVRLLAVRKNFSMIEDIIEAQKKYEEIKDEGFATRLIKLYGKAD
GNLEEAKKWYYKLKESEVNPNASTYKTLLPFLCEQGDFDSGLQLCKEAIDNGLVLHTAEVQRVVDGLAEVSKIEEAKDLVELYNSKTKLNFKLKFPEKST