CuGenDBv2

Gene ID	PI0007249
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	WD repeat-containing protein 43
Genome location	chr01:27250772..27254091
RNA-Seq Expression	PI0007249
Synteny	PI0007249
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058775.1 WD repeat-containing protein 43 [Cucumis melo var. makuwa]

3.0e-299

92.76

Show/hide

Query:  IWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDT
        IWSTRDGSLLAEWKD DGK D GYSCMACC  GK    SYCVVA+GTN+GDVLAVNASNGE+KWVS GCHPGGVIGLSFAN+G RLHTVGSNGMASEMDT
Subjt:  IWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDT

Query:  ETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMK
        ETGNIIKEFKASK       F L +EKYLAVAGKKLKILS DDGDELIVHPDKL PVKLVSISDDAKTIITSELGAKHLQVWWC+MSAGKFSRGPVLSM 
Subjt:  ETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMK

Query:  HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSL
        HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEV PTKVSVKANDNQSAEENHGSAKKNRVSVLASRIH IGDNEVSVLVTHGSVDLPQHSL
Subjt:  HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSL

Query:  LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDG
        LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVI PKSKKSKKKRAASDLDS TAGDVSDVGNGDASDV+FNDDLNEPSMGEKLASLNLADQNEDG
Subjt:  LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDG

Query:  GRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQES
        GR+QEDPSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFIQSRGAILVCALPWLRGLLLQHASKI+SQES
Subjt:  GRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQES

Query:  SLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET---DERDEVEAFDDLSAGEVDDDMSE
        SLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET   DERDEVEAFDDLSAGEVDDDMSE
Subjt:  SLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET---DERDEVEAFDDLSAGEVDDDMSE

XP_004136081.1 WD repeat-containing protein 43 isoform X2 [Cucumis sativus]

0.0e+00

91.84

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI SSNGTLKIWSTRDGSLLAEWKD DGK D GYSCMACCF GK    SYCVVA+GTNSGDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        HPGGVIGLSFANKGCRL TVGSNGMASEMDTETGNIIKEFKASK       F L +E+YL VAGKKLKILSTDDGDELIVHPDKLGPVKLVS+SDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        ITSELGAKHLQVWWCN+SAGKFSRGP+LSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEVTPTKVSVKANDNQSAEENHGSAKKNR 
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD
        SVLASRIHGIGDNEVSVLVTHGSVDLPQH+LLDIGYTVKEDANTAHENKTLQQND VSEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSDVGNGD
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD

Query:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
         SDVLFNDDLNEPSMGEKLASLNLADQN+DGGR+QEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH+LISF
Subjt:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF

Query:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-
        IQSRGAILVCALPWLR L+LQHASKI+SQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD+EENDND IVPIIYEEEDSDENETGDEMET 
Subjt:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-

Query:  --DERDEVEAFDDLSAGEVDDDMSE
          DERDEVEAFDDLSAGEVDDDMSE
Subjt:  --DERDEVEAFDDLSAGEVDDDMSE

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

0.0e+00

92.8

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKD DGK D GYSCMACC  GK    SYC+VA+GTN+GDVLAVNASNGE+KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        HPGGVIGLSFAN+G RLHTVGSNGMASEMDTETGNIIKEFKASK       F L +EKYLAVAGKKLKILS DDGDELIVHPDKL PVKLVSISDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        +TSELGAKHLQVWWC+MSAGKFSRGPVLSM HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEV PTKVSVKANDNQSAEENHGSAKKNRV
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD
        SVLAS+IH IGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDS TAGDVSDVGNGD
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD

Query:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
        ASDV+FNDDLNEPSMGEKLASLNLADQNEDGGR+QEDPSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISF
Subjt:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF

Query:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-
        IQSRGAILVCALPWLRGLLLQHASKI+SQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET 
Subjt:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-

Query:  --DERDEVEAFDDLSAGEVDDDMSE
          DERDEVEAFDDLSAGEVDDDMSE
Subjt:  --DERDEVEAFDDLSAGEVDDDMSE

XP_031744699.1 WD repeat-containing protein 43 isoform X1 [Cucumis sativus]

0.0e+00

90.68

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Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI SSNGTLKIWSTRDGSLLAEWKD DGK D GYSCMACCF GK    SYCVVA+GTNSGDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        HPGGVIGLSFANKGCRL TVGSNGMASEMDTETGNIIKEFKASK       F L +E+YL VAGKKLKILSTDDGDELIVHPDKLGPVKLVS+SDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        ITSELGAKHLQVWWCN+SAGKFSRGP+LSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEVTPTKVSVKANDNQSAEENHGSAKKNR 
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSD-----
        SVLASRIHGIGDNEVSVLVTHGSVDLPQH+LLDIGYTVKEDANTAHENKTLQQND VSEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSD     
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSD-----

Query:  ---VGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK
           VGNGD SDVLFNDDLNEPSMGEKLASLNLADQN+DGGR+QEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL 
Subjt:  ---VGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLK

Query:  LLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENE
        LLH+LISFIQSRGAILVCALPWLR L+LQHASKI+SQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD+EENDND IVPIIYEEEDSDENE
Subjt:  LLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENE

Query:  TGDEMET---DERDEVEAFDDLSAGEVDDDMSE
        TGDEMET   DERDEVEAFDDLSAGEVDDDMSE
Subjt:  TGDEMET---DERDEVEAFDDLSAGEVDDDMSE

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

2.9e-302

88.5

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Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAI SSNGTLKIWSTRDGSLLAEWKDPDGK DVGYSCMACCF GK    SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        H GGVIGLSFANKG RLH VGSNG  SEMDTETGNIIKEFKASK       F L +EKYLAVAGKKLKILS DDGDEL+VHPDKLGPVKLVS+SDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        ITSELGAKHLQVWWC+MSAGK SRGPVLSMKHPPFVSECRNVSNQED+VVVLSVSVSG AYLWKLK+LS DEV+PTKVSVKANDNQSAEENHGSAKKNRV
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGNG
        SV+ASRI+G+GDNEVSVLVTHGS+DLPQHSL  IGY+VKED NTA  NKTLQQND  SEQGPHE+EQ V+TPKSKK KKKRAASDLDSLT GD+SDVGNG
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGNG

Query:  DASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS
        DASDV+FNDDLNEPSMGEKLASLNL DQNED GR++E PSVP IPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS
Subjt:  DASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS

Query:  FIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET
        FIQSRGAILVC LPWLRGLLLQHASKI+SQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLY+GVLDEE ++NDAIVPIIYEE+DSD+ E+GDEMET
Subjt:  FIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET

Query:  D---ERDEVEAFDDLSAGEVDDDMSE
        D   ERDEVEAFDDLSAGEVDDDMSE
Subjt:  D---ERDEVEAFDDLSAGEVDDDMSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

0.0e+00

91.84

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI SSNGTLKIWSTRDGSLLAEWKD DGK D GYSCMACCF GK    SYCVVA+GTNSGDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        HPGGVIGLSFANKGCRL TVGSNGMASEMDTETGNIIKEFKASK       F L +E+YL VAGKKLKILSTDDGDELIVHPDKLGPVKLVS+SDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        ITSELGAKHLQVWWCN+SAGKFSRGP+LSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEVTPTKVSVKANDNQSAEENHGSAKKNR 
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD
        SVLASRIHGIGDNEVSVLVTHGSVDLPQH+LLDIGYTVKEDANTAHENKTLQQND VSEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSDVGNGD
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD

Query:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
         SDVLFNDDLNEPSMGEKLASLNLADQN+DGGR+QEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH+LISF
Subjt:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF

Query:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-
        IQSRGAILVCALPWLR L+LQHASKI+SQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD+EENDND IVPIIYEEEDSDENETGDEMET 
Subjt:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-

Query:  --DERDEVEAFDDLSAGEVDDDMSE
          DERDEVEAFDDLSAGEVDDDMSE
Subjt:  --DERDEVEAFDDLSAGEVDDDMSE

A0A1S3CDX9 WD repeat-containing protein 43

0.0e+00

92.8

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKD DGK D GYSCMACC  GK    SYC+VA+GTN+GDVLAVNASNGE+KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        HPGGVIGLSFAN+G RLHTVGSNGMASEMDTETGNIIKEFKASK       F L +EKYLAVAGKKLKILS DDGDELIVHPDKL PVKLVSISDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        +TSELGAKHLQVWWC+MSAGKFSRGPVLSM HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEV PTKVSVKANDNQSAEENHGSAKKNRV
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD
        SVLAS+IH IGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDS TAGDVSDVGNGD
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD

Query:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
        ASDV+FNDDLNEPSMGEKLASLNLADQNEDGGR+QEDPSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISF
Subjt:  ASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF

Query:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-
        IQSRGAILVCALPWLRGLLLQHASKI+SQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET 
Subjt:  IQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET-

Query:  --DERDEVEAFDDLSAGEVDDDMSE
          DERDEVEAFDDLSAGEVDDDMSE
Subjt:  --DERDEVEAFDDLSAGEVDDDMSE

A0A5A7UYX1 WD repeat-containing protein 43

1.5e-299

92.76

Show/hide

Query:  IWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDT
        IWSTRDGSLLAEWKD DGK D GYSCMACC  GK    SYCVVA+GTN+GDVLAVNASNGE+KWVS GCHPGGVIGLSFAN+G RLHTVGSNGMASEMDT
Subjt:  IWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDT

Query:  ETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMK
        ETGNIIKEFKASK       F L +EKYLAVAGKKLKILS DDGDELIVHPDKL PVKLVSISDDAKTIITSELGAKHLQVWWC+MSAGKFSRGPVLSM 
Subjt:  ETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMK

Query:  HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSL
        HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLS DEV PTKVSVKANDNQSAEENHGSAKKNRVSVLASRIH IGDNEVSVLVTHGSVDLPQHSL
Subjt:  HPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSL

Query:  LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDG
        LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVI PKSKKSKKKRAASDLDS TAGDVSDVGNGDASDV+FNDDLNEPSMGEKLASLNLADQNEDG
Subjt:  LDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDG

Query:  GRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQES
        GR+QEDPSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFIQSRGAILVCALPWLRGLLLQHASKI+SQES
Subjt:  GRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQES

Query:  SLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET---DERDEVEAFDDLSAGEVDDDMSE
        SLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET   DERDEVEAFDDLSAGEVDDDMSE
Subjt:  SLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMET---DERDEVEAFDDLSAGEVDDDMSE

A0A6J1D938 WD repeat-containing protein 43

4.9e-279

82.59

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCF------WGKSYCVVAVGTNSGDVLAVNASNGERKWVSA
        MKKE+LKSPPITAFTPDGDYLAI S N T+KIWS RDGSLLAEWKD +GK DVGYSC+ACCF        KS CV+A+GT++GDVLAVNAS+GE KWVSA
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCF------WGKSYCVVAVGTNSGDVLAVNASNGERKWVSA

Query:  GCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAK
        GCH GGVIGLSFANKG RL TVGSNGMASEMDTETGNIIKEFKASK       F   +EKYLAVAGKKL+ILSTD+GDEL+VH DKLGPVKLVSISDDAK
Subjt:  GCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAK

Query:  TIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKN
         IITSE GAKHLQVWWC+MSA K SRGPVLSMKHPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LS DEV+P KV+VKAND QSAEENHGSAKKN
Subjt:  TIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKN

Query:  RVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVG
        R+SV+ASRI G GDNEVSVLVTHGS+D PQ SL +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ V TPKSKKSKKKRAASD+DSLTAGDVS VG
Subjt:  RVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVG

Query:  NGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSL
        NGDASDVLFNDD+NEP+MGEKLASLNL DQ+ED   +QE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSL
Subjt:  NGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSL

Query:  ISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYE-EEDSDENETGDE
        IS IQSRGAILVCALPWLRGLLLQHAS+I+SQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE E+DSD+ E+GDE
Subjt:  ISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYE-EEDSDENETGDE

Query:  METDERDE----VEAFDDLSAGEVDD
        METDE +E     EAF DLSAGEVDD
Subjt:  METDERDE----VEAFDDLSAGEVDD

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

9.6e-267

79.27

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC
        MK E  KSPPITAFTP+GDYLAI SSNGT+KIW+T DGSLLAEWKDPDGK D GYSC+ACCF GK    S C++A+GTN GDVL VNAS+GE KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGK----SYCVVAVGTNSGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI
        H GGVIGLSFA+KG RLHTVGSNG+A +M+ ETG+II EFKASK       F L +EKYLAVAGKKLKILSTDDG EL+VHPDKLGPVKL SISDDAKTI
Subjt:  HPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTI

Query:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV
        ITSE GAKH+QVWWC+MSAGK SRGPVLSMKHPPFVSECRN++N EDS+VVLSVSVSG AYLWKLK LS D+V PTKV+VK N+ +SAEENHGSAKKNR+
Subjt:  ITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRV

Query:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVIT-PKSKKSKKKRAASDLDSLTAGDVSDVGNG
        SVL+S I G+GDNEVSVLVTHGS+DLPQH++L+IGY  KEDAN A E           ++GPHEI+Q +T PKSKKSKKKRAASDLDS  AGDVSDVGN 
Subjt:  SVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVIT-PKSKKSKKKRAASDLDSLTAGDVSDVGNG

Query:  DASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS
        D S+VLFNDDLNEP+MG+KLASLNL +QNED   +Q++PSVP IPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LIS
Subjt:  DASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLIS

Query:  FIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENE-TGDEME
         IQSRGAILVCA+PWLRGLLLQHAS+I+SQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE  +NDAIVPIIYEE+DSD+ E +GDEME
Subjt:  FIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENE-TGDEME

Query:  TDERD---EVEAFDDLSAGEVDDDMSE
        TDE     EVEAFDDLSAGEVDDDMSE
Subjt:  TDERD---EVEAFDDLSAGEVDDDMSE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

1.6e-08

21.98

Show/hide

Query:  AFTPDGD-YLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWG---------------KSYCV--------VAVGTNSGDVLAVNASNGE
        AF+P    Y A+ S++G L++W T +  L  E+  P   +    +C+A   W                KS  V        +A+GT  G +L  +   GE
Subjt:  AFTPDGD-YLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWG---------------KSYCV--------VAVGTNSGDVLAVNASNGE

Query:  --RKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFK---ASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGD---ELIVHPDK
           K +S G H   V  + +      L++   +    E + +T  +  ++K   +S +   + P    + K L  AG+ +K+   +  +       H   
Subjt:  --RKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFK---ASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGD---ELIVHPDK

Query:  LGPVKLVSISD-------DAKTIITSELGAKH---LQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVT
        +  +   +I         D  T +    GA H   L VW       + S     ++   P   +     N+E+ V +  V   G  +L++  +L+G    
Subjt:  LGPVKLVSISD-------DAKTIITSELGAKH---LQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVT

Query:  PTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVIT---P
        P       ++        G  KK+    +     G   +++S+L+ +GS   P         T++  A  + E       D +S     ++E  IT    
Subjt:  PTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVIT---P

Query:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLY
            S+ K     +    A         +  +       NE S+ E+L ++++ D ++ G    +  S P          VLL Q L ++D  +L + L 
Subjt:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLY

Query:  TKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE
        T++  +I K++ ++    ++ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E
Subjt:  TKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE

Query:  ENDNDAI----VPIIYEEEDSDENETGDEMETDERDEVEAFDDLSAGEVDDDMSE
        +            ++YEEE S+E    +  + D  D  +  ++ S  E D+D+ E
Subjt:  ENDNDAI----VPIIYEEEDSDENETGDEMETDERDEVEAFDDLSAGEVDDDMSE

Q6ZQL4 WD repeat-containing protein 43

1.7e-05

22.48

Show/hide

Query:  AFTPDGD-YLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGKSYC-----------------------VVAVGTNSGDVLAVNASNGE
        AF+PD   Y A+ SS+G L++W T +  L  E+  P   +    +C+A   W  +                         ++A+GT  G +L  +   GE
Subjt:  AFTPDGD-YLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGKSYC-----------------------VVAVGTNSGDVLAVNASNGE

Query:  -RKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFK---ASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPV
            +++G H   V  + +      L++   +    E  T+T  +  ++K   +S +   + P    + K L  AG+ +K+   +  +          PV
Subjt:  -RKWVSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFK---ASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPV

Query:  KLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSA
          +  +    TI  +E            ++   F  G V    H   ++  +  S  ++   V+S +V+       L  LS ++  P K++V   D Q  
Subjt:  KLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSA

Query:  EENH---GSAKKNRVSVLASRIHGIGDNE----VSVLVTHGSVDLPQHSLLDI-----GYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKS
           H   G  KK   S    +I   G  +      + +   S  L + SLL +       T++  A  + +     + D +S      +E  IT K K  
Subjt:  EENH---GSAKKNRVSVLASRIHGIGDNE----VSVLVTHGSVDLPQHSLLDI-----GYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKS

Query:  KKKRAASDLDSLTAGDVSDVGNGDASDVLFND----DLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYT
             A  L     G  + +    A      +       E ++ E+L +++L    +  GRK +           +S  VLL Q L ++D  +L + L T
Subjt:  KKKRAASDLDSLTAGDVSDVGNGDASDVLFND----DLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYT

Query:  KDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEE
        K+  +I +++ ++    V+ LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E+
Subjt:  KDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEE

Query:  NDN----DAIVPIIYEEEDSDENETGDEMETDERDEVEAFDDLSAGEVDDDMSE
        +           ++YEEE S+E E+ DE+   + D+    D+    E D+ + E
Subjt:  NDN----DAIVPIIYEEEDSDENETGDEMETDERDEVEAFDDLSAGEVDDDMSE

Q8YV57 Uncharacterized WD repeat-containing protein all2124

3.7e-05

26.13

Show/hide

Query:  AFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKID-VGYSCMACCFWGKSYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGC
        +FTP GD +A  +++ T+KIW  RDG  L      D +++ V +S       GK+   +A  +    V   N S+G+ K    G H   V  +SF+  G 
Subjt:  AFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKID-VGYSCMACCFWGKSYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGC

Query:  RLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAV-AGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVW
         + +  ++      D+ +GN+IK   A  +      F+       +  A K +K+  + DG  L         V   S S D +  I S    K +++W
Subjt:  RLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAV-AGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVW

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

4.7e-48

49.81

Show/hide

Query:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVP--VIPPSADSVQVLLKQALHADDRALLLEC
        K KK  KKRA  + D  +  D     + D   VL +D LNEP++G+KL SL+L +  +    +    S P    PP+A SV VLL+QALHADDR+LLL+C
Subjt:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVP--VIPPSADSVQVLLKQALHADDRALLLEC

Query:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD
        LY +D++VI+ S+A+LNS++VLKLL++L+  +QSRGAIL C +PW++ LLL H+S I+SQESSLLALN++YQLIESR+ST  +A+ +SS LD L    LD
Subjt:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD

Query:  EEENDNDAIVPIIYEEEDSDENE---TGDEMETDERDE---VEAFDDLSAGEVDDDMSE
        EEE++     P+IYE++DSDE+E     + METDE  +    EA D ++  E  DDMS+
Subjt:  EEENDNDAIVPIIYEEEDSDENE---TGDEMETDERDE---VEAFDDLSAGEVDDDMSE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

8.6e-34

24.25

Show/hide

Query:  ITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKD-------------PDGKIDVGYSCMACCFWGK------SYCVVAVGTNSGDVLAVNASNGERKW
        +T+F+P  DYLA+ + +G +KIW T  G +  E+ D               G + V Y+CM      K         V+ +GT  GDVLA++ ++G+ KW
Subjt:  ITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKD-------------PDGKIDVGYSCMACCFWGK------SYCVVAVGTNSGDVLAVNASNGERKW

Query:  VSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASK---NQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVS
          + CHPGGV  +S + K   +++ G++GM  ++D  +GN+I++FKAS    +   + P    + K L  A  +LK  +  D  ++       G V+ V+
Subjt:  VSAGCHPGGVIGLSFANKGCRLHTVGSNGMASEMDTETGNIIKEFKASK---NQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVS

Query:  ISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLW-KLKVLSGDEVTPTKVSVKANDNQSAEEN
         ++D K +++S +G +++ VW  +  A K S   VL+++HPP   +    +N E  + VL++S  G  Y W    V      TPTKV++      +A+ +
Subjt:  ISDDAKTIITSELGAKHLQVWWCNMSAGKFSRGPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLW-KLKVLSGDEVTPTKVSVKANDNQSAEEN

Query:  HGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQ-QNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTA
            K +   + A+++ GI        +  GS     H+ +  G  VK     + +   LQ  ND V       I   IT    KS K++   +      
Subjt:  HGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQ-QNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTA

Query:  GDVSDVGNGDASDVLF------------NDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI
          V+ +    A D L             +  L+       +   + AD  E    + +  S+ ++  + +   +     +   D    L        K +
Subjt:  GDVSDVGNGDASDVLF------------NDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI

Query:  SKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGV----------
          ++  +  S   K L +L +  Q+R       LPW+  +++ H+  I+SQE  +   LN+L ++ +SR +  Q  L LS  L  +   +          
Subjt:  SKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGV----------

Query:  ------LDEEENDNDAIVPIIYEEEDSDENETGDE
              +DE E++ + +    Y E D++ + + D+
Subjt:  ------LDEEENDNDAIVPIIYEEEDSDENETGDE

Sequences

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CDS sequence

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ATGAAGAAGGAAATTCTTAAATCGCCGCCTATCACAGCTTTCACTCCCGACGGCGATTATCTCGCCATCTTCTCCTCAAATGGAACTCTTAAGATTTGGAGTACTCGTGA
TGGGAGTTTACTGGCAGAGTGGAAGGACCCAGATGGAAAAATTGATGTTGGTTATTCCTGTATGGCATGCTGTTTTTGGGGAAAAAGTTATTGTGTAGTTGCTGTTGGTA
CCAATAGTGGGGATGTGTTGGCTGTGAATGCTTCAAATGGTGAGAGGAAGTGGGTCTCTGCAGGCTGCCATCCTGGTGGAGTTATTGGCCTTTCTTTTGCGAACAAAGGC
TGTAGACTGCATACAGTTGGAAGTAATGGAATGGCCTCTGAGATGGACACTGAAACCGGAAACATTATCAAGGAGTTCAAAGCTTCGAAAAATCAATATCTTCTTCAGCC
TTTTCACTTGGTTAATGAAAAGTACTTAGCTGTAGCTGGTAAAAAGTTGAAGATTTTAAGCACAGATGACGGGGATGAGCTTATTGTGCACCCTGATAAATTGGGTCCTG
TGAAGCTTGTTTCTATATCTGATGATGCTAAAACAATAATTACGTCAGAACTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTAATATGAGTGCGGGAAAATTTAGTAGA
GGTCCTGTTCTGTCCATGAAGCATCCTCCATTTGTCTCTGAATGCAGAAATGTTAGTAATCAAGAAGACAGCGTAGTTGTCTTGTCAGTATCAGTATCAGGTGCAGCTTA
TTTATGGAAATTAAAGGTACTATCTGGGGACGAGGTTACTCCAACTAAAGTCTCTGTAAAAGCTAATGACAACCAATCAGCTGAGGAAAACCATGGCAGTGCTAAGAAGA
ATCGAGTTTCTGTCCTTGCTTCCAGAATACATGGTATAGGAGACAATGAAGTATCAGTTCTTGTTACTCATGGCTCCGTGGACCTACCACAGCATAGTCTTTTAGATATT
GGGTATACCGTGAAGGAAGATGCAAATACTGCACATGAGAATAAAACACTCCAACAAAATGATGGTGTTTCTGAACAAGGTCCCCATGAGATCGAACAAGTGATTACACC
TAAAAGCAAGAAAAGCAAAAAGAAAAGAGCAGCGTCTGATCTTGATAGTCTGACAGCTGGAGATGTCAGTGATGTTGGCAATGGAGATGCTTCTGATGTTCTATTTAATG
ATGATTTAAATGAGCCATCCATGGGAGAGAAACTTGCGAGTTTGAATTTGGCGGACCAGAATGAGGATGGAGGTCGTAAACAAGAAGATCCTTCCGTCCCTGTAATACCA
CCAAGTGCAGACTCTGTTCAGGTTTTGCTTAAGCAAGCGCTACATGCGGACGATCGTGCCCTTTTGCTAGAATGCTTATATACCAAGGATGATAAGGTTATTTCAAAATC
AATAGCACAATTAAACTCATCTGATGTTCTCAAGCTTTTGCACTCTCTAATATCCTTTATCCAGTCAAGAGGGGCAATTCTTGTATGTGCCCTCCCTTGGCTGAGAGGCT
TACTTCTCCAACATGCTAGCAAAATCATTTCTCAAGAATCTTCTCTCCTCGCCTTGAACTCTCTATATCAGCTCATTGAATCTAGAATTTCAACATTCCAGTCCGCTTTA
CTGCTATCAAGTAGCTTAGACTTCCTCTACACAGGGGTCCTTGACGAGGAGGAGAATGATAATGACGCCATTGTACCGATTATTTACGAGGAGGAAGATAGCGACGAAAA
TGAAACGGGCGATGAAATGGAAACTGATGAAAGGGATGAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAAGTTGATGATGACATGAGTGAATGA

mRNA sequence

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Protein sequence

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MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDPDGKIDVGYSCMACCFWGKSYCVVAVGTNSGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKG
CRLHTVGSNGMASEMDTETGNIIKEFKASKNQYLLQPFHLVNEKYLAVAGKKLKILSTDDGDELIVHPDKLGPVKLVSISDDAKTIITSELGAKHLQVWWCNMSAGKFSR
GPVLSMKHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSGDEVTPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHGIGDNEVSVLVTHGSVDLPQHSLLDI
GYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLADQNEDGGRKQEDPSVPVIP
PSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIISQESSLLALNSLYQLIESRISTFQSAL
LLSSSLDFLYTGVLDEEENDNDAIVPIIYEEEDSDENETGDEMETDERDEVEAFDDLSAGEVDDDMSE

PI0007249 (gene) of Melon (PI 482460) v1 genome