CuGenDBv2

Gene ID	PI0007251
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	RNA-binding KH domain-containing protein PEPPER-like
Genome location	chr11:2243455..2249447
RNA-Seq Expression	PI0007251
Synteny	PI0007251
Gene Ontology terms	GO:0010468 - regulation of gene expression (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR004087 - K Homology domain IPR004088 - K Homology domain, type 1 IPR036612 - K Homology domain, type 1 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039772.1 RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa]

5.9e-145

84.09

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + D+    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA

XP_008459768.1 PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo]

9.7e-148

84.27

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + D+    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

XP_011656837.1 RNA-binding KH domain-containing protein PEPPER [Cucumis sativus]

7.4e-148

84.55

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + DI    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

XP_022959402.1 flowering locus K homology domain-like [Cucurbita moschata]

5.0e-144

82.02

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Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       ++D+    R+A      FRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAE+ALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

XP_038875599.1 flowering locus K homology domain-like isoform X1 [Benincasa hispida]

4.5e-145

82.58

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Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPS+P MAPLPVSM LPGTLLV                       + D+    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDN+NSVTDAE+ALQQIAALILKEDG+S+EELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCF8 Uncharacterized protein

3.6e-148

84.55

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + DI    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

A0A1S3CB11 RNA-binding KH domain-containing protein PEPPER-like

4.7e-148

84.27

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + D+    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

A0A5A7T8H9 RNA-binding KH domain-containing protein PEPPER-like

2.8e-145

84.09

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       + D+    R+A      FRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENSVTDAE+ALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTA

A0A6J1H4F3 flowering locus K homology domain-like

2.4e-144

82.02

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPGTLLV                       ++D+    R+A      FRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD ENSVTDAE+ALQ IAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Subjt:  GATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

A0A6J1L0K4 RNA-binding KH domain-containing protein PEPPER-like

2.2e-142

81.51

Show/hide

Query:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSM LPG LLV                       ++D+    R+A      FRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMSLPGTLLV----------------------PSLDIHEGPRRA------FRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILA
        TIKIADAVARYEERVIIISSKD ENSVTDAE+ALQ IAALILKEDG +SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILA
Subjt:  TIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILA

Query:  PNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRVNPPRQVISVSPTY         +      +NYVTFEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTY--------ITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW
        SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ+IRQAGVQQTALQMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

SwissProt top hits

e value

%identity

Alignment

F4KDN0 KH domain-containing protein HEN4

1.2e-12

31.09

Show/hide

Query:  TLLVPSLDIHEGPRRAFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENSVT-------DAERALQQIAALILKEDG
        T L+ +L +  G   AFR++ P   +G VIGK G  I+++++ T A I++ +  +   +RVI II+  D+++ V        +AE   ++    + K  G
Subjt:  TLLVPSLDIHEGPRRAFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENSVT-------DAERALQQIAALILKEDG

Query:  SSIEELKVGTGHVAANTI--RLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR
        + I+  ++      ++T+  RLL   S AG++IG  GQ +  +R  +G  I+I   N LP+CA     D +V++ G+ +AV KAL  I   L+
Subjt:  SSIEELKVGTGHVAANTI--RLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR

P57721 Poly(rC)-binding protein 3

1.8e-11

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Query:  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGS
        R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA      + A   +ED  +       T      T+RL++  S
Subjt:  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGS

Query:  QAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-------------QVISVSPTYITIQ---
        Q GSLIG  G  I+++R S+GA + + A + LP     + ++R V ISG   A+++ +++I   +  +PP+              VI       TIQ   
Subjt:  QAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-------------QVISVSPTYITIQ---

Query:  CIRHINYV-----------------------------------------------------TFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR
         I H + +                                                     T E+ I   L+G +IG  G  I+ IR  SGA IK+    
Subjt:  CIRHINYV-----------------------------------------------------TFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR

Query:  GEQNYRQIQFGGSAEQVALAKQRVDEYIYSQV
           + RQI   G+   ++LA+  ++  + S+V
Subjt:  GEQNYRQIQFGGSAEQVALAKQRVDEYIYSQV

P57722 Poly(rC)-binding protein 3

1.8e-11

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Query:  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGS
        R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA      + A   +ED  +       T      T+RL++  S
Subjt:  RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGS

Query:  QAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-------------QVISVSPTYITIQ---
        Q GSLIG  G  I+++R S+GA + + A + LP     + ++R V ISG   A+++ +++I   +  +PP+              VI       TIQ   
Subjt:  QAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-------------QVISVSPTYITIQ---

Query:  CIRHINYV-----------------------------------------------------TFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR
         I H + +                                                     T E+ I   L+G +IG  G  I+ IR  SGA IK+    
Subjt:  CIRHINYV-----------------------------------------------------TFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR

Query:  GEQNYRQIQFGGSAEQVALAKQRVDEYIYSQV
           + RQI   G+   ++LA+  ++  + S+V
Subjt:  GEQNYRQIQFGGSAEQVALAKQRVDEYIYSQV

Q9SR13 Flowering locus K homology domain

2.7e-15

34.52

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIA
        FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S+  +   L ++   I+  DG   E  +       +   RLL+ 
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIA

Query:  GSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR
         SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR
Subjt:  GSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR

Q9SZH4 RNA-binding KH domain-containing protein PEPPER

1.8e-16

32.74

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIA
        FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   +      A+  +  +  +  G    ++  V       +++RLL+A
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIAALILKEDG-SSIEELKVGTGHVAANTIRLLIA

Query:  GSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR
         +QA +LIG  G  I+ +  +SGAS+ IL+  + P  A+  + +R+V + G+ L +LKALE I   LR
Subjt:  GSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR

Arabidopsis top hits

e value

%identity

Alignment

AT1G14170.1 RNA-binding KH domain-containing protein

2.0e-18

29.66

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH
        +R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          V  A  AL ++  +++    ++DG+  +      G 
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH

Query:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--
            T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ + L  NP R Q + +S +  ++   
Subjt:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--

Query:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV
                    H NY                +     VGG+IG GG  I++IR E+GATI+V
Subjt:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV

AT1G14170.2 RNA-binding KH domain-containing protein

2.0e-18

29.66

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH
        +R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          V  A  AL ++  +++    ++DG+  +      G 
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH

Query:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--
            T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ + L  NP R Q + +S +  ++   
Subjt:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--

Query:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV
                    H NY                +     VGG+IG GG  I++IR E+GATI+V
Subjt:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV

AT1G14170.3 RNA-binding KH domain-containing protein

2.0e-18

29.66

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH
        +R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          V  A  AL ++  +++    ++DG+  +      G 
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSVTDAERALQQIAALIL----KEDGSSIEELKVGTGH

Query:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--
            T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+ L V +AL ++ + L  NP R Q + +S +  ++   
Subjt:  VAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR-QVISVSPTYITIQ--

Query:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV
                    H NY                +     VGG+IG GG  I++IR E+GATI+V
Subjt:  ---------CIRHINYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKV

AT5G15270.1 RNA-binding KH domain-containing protein

8.7e-22

30.85

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAAN
        FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E  ++ A+ AL +I   ++ +D  S E+   G   V   
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAAN

Query:  TIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--QVISVSPTYITIQCIRHI
        T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG++L V KAL +I ++L  NP R   ++S S  Y     + H 
Subjt:  TIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--QVISVSPTYITIQCIRHI

Query:  N-----------------------------------YVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN
                                               F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Subjt:  N-----------------------------------YVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN

AT5G15270.2 RNA-binding KH domain-containing protein

8.7e-22

30.85

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Query:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAAN
        FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E  ++ A+ AL +I   ++ +D  S E+   G   V   
Subjt:  FRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENSVTDAERALQQIAALILKEDGSSIEELKVGTGHVAAN

Query:  TIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--QVISVSPTYITIQCIRHI
        T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG++L V KAL +I ++L  NP R   ++S S  Y     + H 
Subjt:  TIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPR--QVISVSPTYITIQCIRHI

Query:  N-----------------------------------YVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN
                                               F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Subjt:  N-----------------------------------YVTFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN

Sequences

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CDS sequence

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ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTTCCTGTTTCCATGTCCTTACCCGGTACGCTCTTGGTTCCGAGCCTGGACATACACGA
AGGCCCACGACGTGCTTTCAGAATCGTTGTGCCCTCCAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGTCGAATTCAGAAGGTTCGTGAGGAGACGAAAGCTACGA
TTAAGATTGCGGATGCAGTCGCGCGGTATGAAGAACGTGTCATCATTATAAGTTCAAAGGACAATGAGAATTCGGTTACTGATGCGGAGAGAGCACTTCAGCAAATTGCA
GCACTGATATTGAAGGAAGATGGTTCGAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTAATTGCAGGATCTCAAGCAGGTTC
CTTGATTGGTGCCTCAGGTCAAAATATTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCACGAAT
CTGACCGGGTGGTGCAAATATCAGGGGATATTCTGGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCCGTTAGC
CCAACATATATTACAATACAATGCATCCGCCACATTAATTATGTAACCTTCGAGATGTTGATTTCGGAGACATTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACAT
ATCAAGAATCAGAAATGAATCTGGGGCTACTATCAAGGTTTGTGGTGGCAGAGGTGAACAAAATTACAGGCAAATACAATTTGGTGGAAGTGCTGAACAGGTAGCGTTGG
CAAAACAAAGGGTTGATGAATATATTTATTCTCAGGTGATCCGACAAGCTGGTGTTCAACAAACAGCTCTGCAGATGTGGTAA

mRNA sequence

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Protein sequence

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MQPGDIPLYPSMPAMAPLPVSMSLPGTLLVPSLDIHEGPRRAFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAERALQQIA
ALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVS
PTYITIQCIRHINYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQQTALQMW

PI0007251 (gene) of Melon (PI 482460) v1 genome