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PI0007280 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007280
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease P
Genome locationchr01:15696736..15698103
RNA-Seq ExpressionPI0007280
SyntenyPI0007280
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030677 - ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061295.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa]1.6e-7694.81Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLDGL FEQYKLMVGH LPDNV +QMQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]6.6e-7896.1Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRL+GL FEQYKLMVGH LPDNVNLQMQNCLEKIATLEN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

XP_008461474.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo]6.2e-7694.16Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLDGL FEQYKLMVGH LPDNV + MQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]1.0e-7087.66Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALR+D L FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]8.7e-7896.1Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLD L FEQYKLMVGHRLPDNVNLQMQNCLEKIATLE+
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

TrEMBL top hitse value%identityAlignment
A0A0A0K7W3 Ribonuclease P2.3e-6895.62Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDN
        LLDLSGNTRACKNTALRL+GL FEQYKLMVGH LPDN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDN

A0A1S3CEI9 Ribonuclease P3.0e-7694.16Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLDGL FEQYKLMVGH LPDNV + MQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

A0A5D3CDD4 Ribonuclease P7.9e-7794.81Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDLSGNTRACKNTALRLDGL FEQYKLMVGH LPDNV +QMQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

A0A6J1EVL4 Ribonuclease P1.4e-7087.01Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV+YVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALRLD L FEQYKLMVG R+ D VNLQMQNCLEKI +L+N
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

A0A6J1IBH7 Ribonuclease P5.0e-7187.66Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        LLDL+GN+RACKNTALR+D L FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP51.4e-0933.33Show/hide
Query:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----C
        MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E YR VW+A+  + S+ N     
Subjt:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACK
        P   N L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q54EP3 Probable ribonuclease P/MRP protein subunit POP52.3e-1230.16Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN
        MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A+T++ S    P+ F 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLMFEQY
        ++ + G+ R C+  A+++ G     Y
Subjt:  LLDLSGNTRACKNTALRLDGLMFEQY

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP55.7e-4863.23Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVF
        MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITKLCI+R+SRE++R VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        NLLD+SG  RAC++TAL+ D   FEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

Q969H6 Ribonuclease P/MRP protein subunit POP58.0e-1032.48Show/hide
Query:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----C
        MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A+  +  + N     
Subjt:  MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACK
        P  FN L + G  R C+
Subjt:  PVVFNLLDLSGNTRACK

Q9UU90 Ribonuclease P/MRP protein subunit POP57.0e-1433.58Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNC
        MVRFK+RY++ EVL    K+   D P I     IT  ++SK I+  +  NFG+ G      S  VKY +P T   I+R SR+ +R  WAA+ ++R +   
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNC

Query:  PVVFNLLDLSGNTRACKNTALRLDGLMFEQYKLM
        PV+  ++ +SG  +  +  A+  +        LM
Subjt:  PVVFNLLDLSGNTRACKNTALRLDGLMFEQYKLM

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein4.0e-4963.23Show/hide
Query:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVF
        MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITKLCI+R+SRE++R VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN
        NLLD+SG  RAC++TAL+ D   FEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTAAAGTATGTAAATCCGATCACGAAGTTATGTATTATTAGAG
CCTCCAGAGAGGACTACCGGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCC
TGCAAAAACACTGCCTTGAGGCTCGATGGATTGATGTTTGAGCAATACAAACTTATGGTTGGACATCGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTTGA
GAAGATTGCAACTTTGGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTAAAGTATGTAAATCCGATCACGAAGTTATGTATTATTAGAG
CCTCCAGAGAGGACTACCGGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCC
TGCAAAAACACTGCCTTGAGGCTCGATGGATTGATGTTTGAGCAATACAAACTTATGGTTGGACATCGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTTGA
GAAGATTGCAACTTTGGAAAACTGA
Protein sequenceShow/hide protein sequence
MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRA
CKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN