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PI0007307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:18592980..18594115
RNA-Seq ExpressionPI0007307
SyntenyPI0007307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.9e-2446.32Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL

Query:  CLKAVPFLSAIQTISIPSGLCNQMALNRMITFHGHK
         +KA P L   Q + + +G+C    L+R IT H +K
Subjt:  CLKAVPFLSAIQTISIPSGLCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]3.2e-2754.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET

Query:  LCLKAV-PFLSAIQTISIPSGLCN
        LCLK +      I  I +  G CN
Subjt:  LCLKAV-PFLSAIQTISIPSGLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]6.0e-2650.41Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL

Query:  CLKAVPFL-SAIQTISIPSGLCN
        CL++   L  + Q   +  G+CN
Subjt:  CLKAVPFL-SAIQTISIPSGLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2856.2Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV

Query:  ETLCLKAVPFLSAIQTISIPS
        E LCLK +P L      +IPS
Subjt:  ETLCLKAVPFLSAIQTISIPS

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.2e-2754.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET

Query:  LCLKAV-PFLSAIQTISIPSGLCN
        LCLK +      I  I +  G CN
Subjt:  LCLKAV-PFLSAIQTISIPSGLCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase1.5e-2754.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET

Query:  LCLKAV-PFLSAIQTISIPSGLCN
        LCLK +      I  I +  G CN
Subjt:  LCLKAV-PFLSAIQTISIPSGLCN

A0A5A7V6M5 Gag/pol protein8.1e-2956.2Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTV

Query:  ETLCLKAVPFLSAIQTISIPS
        E LCLK +P L      +IPS
Subjt:  ETLCLKAVPFLSAIQTISIPS

A0A5D3CVL7 Uncharacterized protein1.5e-2754.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + L+WMR PK A PFP+TV+ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVET

Query:  LCLKAV-PFLSAIQTISIPSGLCN
        LCLK +      I  I +  G CN
Subjt:  LCLKAV-PFLSAIQTISIPSGLCN

A0A5D3CW17 Uncharacterized protein9.3e-2546.32Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL

Query:  CLKAVPFLSAIQTISIPSGLCNQMALNRMITFHGHK
         +KA P L   Q + + +G+C    L+R IT H +K
Subjt:  CLKAVPFLSAIQTISIPSGLCNQMALNRMITFHGHK

A0A5D3DVQ6 Uncharacterized protein2.9e-2650.41Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I   I AW++ P+GA PFP  +E L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETL

Query:  CLKAVPFL-SAIQTISIPSGLCN
        CL++   L  + Q   +  G+CN
Subjt:  CLKAVPFL-SAIQTISIPSGLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68690.1 Protein kinase superfamily protein8.1e-0534.32Show/hide
Query:  APLVASTPHLNPKNQSNSDPPRASSPIPIT----PPSLHISPR-HSPLPHIRSPTNIPHLSPRP----PTPPPTKS-----TSPLHSKSPSPRRAEPLSP
        +PL  S P   P       PP  +SP P+     PP L   P   SP P    P+  P  SP P    P+PPP+ S       PL S  P P    P  P
Subjt:  APLVASTPHLNPKNQSNSDPPRASSPIPIT----PPSLHISPR-HSPLPHIRSPTNIPHLSPRP----PTPPPTKS-----TSPLHSKSPSPRRAEPLSP

Query:  FLLSPILDLTVLRHDQPATNPVVVEVSLPINHPTKRPPQPSPILLISEEGT-----PPTNQPSQQSPPP
            PIL    +R   P+  P+      P + PT+ PP PSP    SE  T     PP+ +P+Q  PPP
Subjt:  FLLSPILDLTVLRHDQPATNPVVVEVSLPINHPTKRPPQPSPILLISEEGT-----PPTNQPSQQSPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAATTAACCACTGAAGCAAGTGT
GTGGCTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAACTTGGAGTCAGCGATGCTTCTCTATTGCATTCTCGCAAAGAAGCGTGTTAACC
TTGGGGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCGTTGAGACCCTCTGCCTTAAAGCTGTGCCATTCTTA
TCCGCCATCCAAACCATCTCAATACCTAGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAGATGGAAAGGCGGGCAAAGACACT
AGGCGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAACGAAAGGCCCCACTCGTCGCATCAACCCCCCACCTAAACCCAAAAAACCAAAGCAACTCCGATCCTCCCC
GAGCTTCTTCGCCCATTCCAATCACTCCACCATCCCTACACATCTCTCCCCGCCATTCACCTCTTCCCCACATTCGTTCCCCCACCAACATCCCTCACCTTTCCCCAAGA
CCGCCTACACCCCCACCCACAAAATCTACTTCCCCCCTTCACTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCTTGGACCT
AACCGTTCTTCGCCATGACCAACCTGCGACCAACCCTGTGGTTGTTGAGGTTTCTTTGCCCATCAACCATCCCACCAAACGTCCTCCACAACCTTCCCCCATTCTTCTAA
TCTCAGAAGAGGGCACACCACCAACCAACCAACCATCCCAACAATCCCCACCACCGCCCATTATGACCGTCGCGGAAAAAGTTGATGACCCACACGTTAAGGACAAAAAC
CCCATCCTTAATGAAGTTGGCGAGACTGCCTCCTCTGCGCATACCCCCATCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAATTAACCACTGAAGCAAGTGT
GTGGCTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAACTTGGAGTCAGCGATGCTTCTCTATTGCATTCTCGCAAAGAAGCGTGTTAACC
TTGGGGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCGTTGAGACCCTCTGCCTTAAAGCTGTGCCATTCTTA
TCCGCCATCCAAACCATCTCAATACCTAGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAGGAGATGGAAAGGCGGGCAAAGACACT
AGGCGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAACGAAAGGCCCCACTCGTCGCATCAACCCCCCACCTAAACCCAAAAAACCAAAGCAACTCCGATCCTCCCC
GAGCTTCTTCGCCCATTCCAATCACTCCACCATCCCTACACATCTCTCCCCGCCATTCACCTCTTCCCCACATTCGTTCCCCCACCAACATCCCTCACCTTTCCCCAAGA
CCGCCTACACCCCCACCCACAAAATCTACTTCCCCCCTTCACTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCTTGGACCT
AACCGTTCTTCGCCATGACCAACCTGCGACCAACCCTGTGGTTGTTGAGGTTTCTTTGCCCATCAACCATCCCACCAAACGTCCTCCACAACCTTCCCCCATTCTTCTAA
TCTCAGAAGAGGGCACACCACCAACCAACCAACCATCCCAACAATCCCCACCACCGCCCATTATGACCGTCGCGGAAAAAGTTGATGACCCACACGTTAAGGACAAAAAC
CCCATCCTTAATGAAGTTGGCGAGACTGCCTCCTCTGCGCATACCCCCATCGCTTAA
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVETLCLKAVPFL
SAIQTISIPSGLCNQMALNRMITFHGHKEMERRAKTLGDTPEGMALAERKRKAPLVASTPHLNPKNQSNSDPPRASSPIPITPPSLHISPRHSPLPHIRSPTNIPHLSPR
PPTPPPTKSTSPLHSKSPSPRRAEPLSPFLLSPILDLTVLRHDQPATNPVVVEVSLPINHPTKRPPQPSPILLISEEGTPPTNQPSQQSPPPPIMTVAEKVDDPHVKDKN
PILNEVGETASSAHTPIA