; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007325 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007325
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr05:21377791..21378587
RNA-Seq ExpressionPI0007325
SyntenyPI0007325
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061726.1 putative CCR4-associated factor 1-like protein 11 [Cucumis melo var. makuwa]9.9e-12182.26Show/hide
Query:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF
        MLIQTRQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTL                       DF
Subjt:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVAR PH P SIELLKQQGIDF RNR HGV SS+FADLLMSSG+LCN+S+TWVTFHSAYDFGYLVKILTRTKLPS LH+FLNIL  LFGNKVYDVKHMMR
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FCDGLYGGLDR+AKTLDL+RAVGK HQAGSDSLLTWQAFKKMRDV+F KDGPEKHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

XP_004140166.1 probable CCR4-associated factor 1 homolog 9 [Cucumis sativus]9.0e-12283.02Show/hide
Query:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF
        MLIQTRQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL                       DF
Subjt:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVARDPHAPDSIELLKQQGIDF RNR HGV SSRFADL+MSSG+LCNDS+TWVTFHSAYDFGYLVKILTRTKLPS L +FLNIL+ LFG KVYDVKHMMR
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FCDGLYGGLDRLAKTLDLDRAVGK HQAGSDSLLT+QAFKKM DV+F KDGP+KHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

XP_008449941.1 PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo]4.6e-11881.92Show/hide
Query:  RQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDVARD
        RQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTL                       DFDVAR 
Subjt:  RQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDVARD

Query:  PHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFCDGL
        PH P SIELLKQQGIDF RNR HGV SS+FADLLMSSG+LCN+S+TWVTFHSAYDFGYLVKILTRTKLPS LH+FLNIL  LFGNKVYDVKHMMRFCDGL
Subjt:  PHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFCDGL

Query:  YGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        YGGLDR+AKTLDL+RAVGK HQAGSDSLLTWQAFKKMRDV+F KDGPEKHAGVLFGLE+Y
Subjt:  YGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]7.4e-10874.52Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        I  R+VWDFNL HEF LINHL+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSNVDALNLIQ+GLTL                       DFDV
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
         RD HAPDSI+LLK+QGIDFERNR HGV S+RF++LLMSSG+LCN SV+WVTFHSAYDFGYLVKILTR KLPS L EFL IL+A FGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        D LYGGL+R+AKTL +DRAVGKCHQAGSDSLLTW AF+KMRDV+F KDGPEKHAGVL+GLEVY
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]8.7e-11779.25Show/hide
Query:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF
        M IQ RQVWDFNL +EFNLINHL HR+PFIS+DTEFPGV+IRP LHR  LRPSDHYLLLKSNVDALNLIQ+GLTL                       DF
Subjt:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DV RD HAPDSIELLK+QGIDFERNR+HGV SSRFA+LLMSSG+LCNDSVTWVTFHSAYDFGYLVKILTRTKLP+ LH+FL ILR LFGNKVYDVKHMMR
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FCDGLYGGLDR+AKTL +DRAVGK HQAGSDSLLTWQAF+KMRDV+F KDGPEKHAGVL+GLEVY
Subjt:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

TrEMBL top hitse value%identityAlignment
A0A0A0KI60 Poly(A)-specific ribonuclease4.4e-12283.02Show/hide
Query:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF
        MLIQTRQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL                       DF
Subjt:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVARDPHAPDSIELLKQQGIDF RNR HGV SSRFADL+MSSG+LCNDS+TWVTFHSAYDFGYLVKILTRTKLPS L +FLNIL+ LFG KVYDVKHMMR
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FCDGLYGGLDRLAKTLDLDRAVGK HQAGSDSLLT+QAFKKM DV+F KDGP+KHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

A0A1S3BNU2 Poly(A)-specific ribonuclease2.2e-11881.92Show/hide
Query:  RQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDVARD
        RQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTL                       DFDVAR 
Subjt:  RQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDVARD

Query:  PHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFCDGL
        PH P SIELLKQQGIDF RNR HGV SS+FADLLMSSG+LCN+S+TWVTFHSAYDFGYLVKILTRTKLPS LH+FLNIL  LFGNKVYDVKHMMRFCDGL
Subjt:  PHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFCDGL

Query:  YGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        YGGLDR+AKTLDL+RAVGK HQAGSDSLLTWQAFKKMRDV+F KDGPEKHAGVLFGLE+Y
Subjt:  YGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

A0A5D3B887 Poly(A)-specific ribonuclease4.8e-12182.26Show/hide
Query:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF
        MLIQTRQVWD NLLHEFNLI  LLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLKSNVDALNLIQLGLTL                       DF
Subjt:  MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVAR PH P SIELLKQQGIDF RNR HGV SS+FADLLMSSG+LCN+S+TWVTFHSAYDFGYLVKILTRTKLPS LH+FLNIL  LFGNKVYDVKHMMR
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FCDGLYGGLDR+AKTLDL+RAVGK HQAGSDSLLTWQAFKKMRDV+F KDGPEKHAGVLFGLE+Y
Subjt:  FCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

A0A6J1GZY2 Poly(A)-specific ribonuclease3.0e-10774.14Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        I  R+VWDFNL HEF LIN L+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSNVDALNLIQ+GLTL                       DFDV
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
         RD HAPDSI+LLK+QGIDFERNR HGV S+RF++LLMSSG+LCN SV+WVTFHSAYDFGYLVKILTR KLPS L EFL IL+A FGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        D LYGGL+R+AKTL +DRAVGKCHQAGSDSLLTW AF+KMRDV+F KDGPEKHAGVL+GLEVY
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

A0A6J1K4S7 Poly(A)-specific ribonuclease3.6e-10874.52Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        I  R+VWDFNL HEF LINHL+ RYPFIS+DTEFPGV++RP    HP RPSDHYLLLKSNVDALNLIQ+GLTL                       DFDV
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
         RD HAPDSI+LLK+QGIDFERNR HGV S+RF++LLMSSG+LCN SV+WVTFHSAYDFGYLVKILTR KLPS L EFL IL+A FGNKVYDVKHMMRFC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        D LYGGL+R+AKTL +DRAVGKCHQAGSDSLLTW AF+KMRDV+F KDGPEKHAGVL+GLEVY
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 114.2e-9061.94Show/hide
Query:  LIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------
        +I  R VW +NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L       P+  Y LLKSNVDAL+LIQ+GLTL                         
Subjt:  LIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------

Query:  DFDVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHM
        DFDV RDPHAPDSIELL++ GIDFERNR  GV S RFA+L+MSSG++CN+SV+WVTFHSAYDFGYLVKILTR +LP  L EFL +LRA FG++VYDVKH+
Subjt:  DFDVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        MRFC+  LYGGLDR+A++L+++RAVGKCHQAGSDSLLTWQAF++MRD++F++DG EKHAGVL+GLEV+
Subjt:  MRFCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.0e-5945.04Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        I  R+VWD+NL+ EF LI  ++ ++ +I++DTEFPGV+++P +         +Y  LK NVD L LIQ+GLT                        +F++
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
          D +A +SIELL+Q GIDF++N   G+   RF +L+MSSG++ ND+++WVTFH  YDFGYLVK+LT  +LP    +F  +L   F   VYD+KH+M FC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV
        +GL+GGL+RLA+ + ++R VG CHQAGSDSLLT  +F+K+++ +F     EK+ GVL+GL V
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.2e-8960.9Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------DF
        + TR+VW  NL  EF LI+ ++  YPFIS+DTEFPGV+ +  L      P D Y LLK+NVDAL+LIQ+GLTL                         DF
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVARD HAPDSIELL++QGIDFERN   GV S RFA+L+MSSG++CN+ V+WVTFHSAYDFGYL+KILTR +LP  L EF  ++R LFG +VYDVKHMM+
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FC+  L+GGLDR+A+TL+++RAVGKCHQAGSDSLLTW AF++MRD++F++DGPEKHAGVL+GLEV+
Subjt:  FCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.5e-6046.39Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +         HY  LK+NV+ L +IQLGLT                        +FD+
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
          D  A DSIELLKQ GID  +N + G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    +F  ++   F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV
        + L+GGL++LA+ L+++R VG CHQAGSDSLLT   F+K+++ FF+  GP  K++GVL+GL V
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.7e-6046.77Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL------------------------DFD
        IQ R+VW+ NL  E  LI  ++  +PF+++DTEFPG++ RP +         HY  LK+NV+ L +IQLGLT                         +FD
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL------------------------DFD

Query:  VARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRF
        +  D +A DSIELL+Q GIDF +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP     F  ++   F  +VYD+KH+M+F
Subjt:  VARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRF

Query:  CDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV
        C+ L+GGL++LA+ LD++R VG CHQAGSDSLLT   F+K+++ FF+    EK++GVL+GL V
Subjt:  CDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-6146.39Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +         HY  LK+NV+ L +IQLGLT                        +FD+
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
          D  A DSIELLKQ GID  +N + G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    +F  ++   F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV
        + L+GGL++LA+ L+++R VG CHQAGSDSLLT   F+K+++ FF+  GP  K++GVL+GL V
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-6146.39Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV
        IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +         HY  LK+NV+ L +IQLGLT                        +FD+
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-----------------------DFDV

Query:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC
          D  A DSIELLKQ GID  +N + G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP    +F  ++   F   VYD+KH+M+FC
Subjt:  ARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFC

Query:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV
        + L+GGL++LA+ L+++R VG CHQAGSDSLLT   F+K+++ FF+  GP  K++GVL+GL V
Subjt:  DGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGP-EKHAGVLFGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-6146.77Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL------------------------DFD
        IQ R+VW+ NL  E  LI  ++  +PF+++DTEFPG++ RP +         HY  LK+NV+ L +IQLGLT                         +FD
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL------------------------DFD

Query:  VARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRF
        +  D +A DSIELL+Q GIDF +N   G+ S RFA+LLMSSG++ N++V WVTFHS YDFGYL+K+LT   LP     F  ++   F  +VYD+KH+M+F
Subjt:  VARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRF

Query:  CDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV
        C+ L+GGL++LA+ LD++R VG CHQAGSDSLLT   F+K+++ FF+    EK++GVL+GL V
Subjt:  CDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.8e-9160.9Show/hide
Query:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------DF
        + TR+VW  NL  EF LI+ ++  YPFIS+DTEFPGV+ +  L      P D Y LLK+NVDAL+LIQ+GLTL                         DF
Subjt:  IQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------DF

Query:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR
        DVARD HAPDSIELL++QGIDFERN   GV S RFA+L+MSSG++CN+ V+WVTFHSAYDFGYL+KILTR +LP  L EF  ++R LFG +VYDVKHMM+
Subjt:  DVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMR

Query:  FCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        FC+  L+GGLDR+A+TL+++RAVGKCHQAGSDSLLTW AF++MRD++F++DGPEKHAGVL+GLEV+
Subjt:  FCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-9161.94Show/hide
Query:  LIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------
        +I  R VW +NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L       P+  Y LLKSNVDAL+LIQ+GLTL                         
Subjt:  LIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLH-RHPLRPSDHYLLLKSNVDALNLIQLGLTL-------------------------

Query:  DFDVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHM
        DFDV RDPHAPDSIELL++ GIDFERNR  GV S RFA+L+MSSG++CN+SV+WVTFHSAYDFGYLVKILTR +LP  L EFL +LRA FG++VYDVKH+
Subjt:  DFDVARDPHAPDSIELLKQQGIDFERNRVHGVYSSRFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHM

Query:  MRFCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY
        MRFC+  LYGGLDR+A++L+++RAVGKCHQAGSDSLLTWQAF++MRD++F++DG EKHAGVL+GLEV+
Subjt:  MRFCD-GLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMRDVFFLKDGPEKHAGVLFGLEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCCAAACCCGTCAGGTCTGGGATTTCAATCTCCTTCACGAATTCAATCTAATCAATCATCTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCC
GGGCGTCCTGATCCGCCCCACTCTCCACCGCCACCCTCTCCGCCCTTCAGATCACTACCTTCTCCTGAAGTCCAACGTGGACGCTCTAAACCTAATCCAACTGGGTCTCA
CTCTGGATTTCGACGTTGCACGTGACCCTCACGCGCCGGATTCCATCGAGCTGTTAAAACAACAGGGGATTGATTTCGAGCGCAACAGAGTTCATGGGGTTTACTCCTCC
CGGTTCGCGGACTTGCTGATGTCATCGGGTGTTTTGTGTAATGACTCCGTTACATGGGTTACTTTTCATAGTGCCTATGATTTTGGTTACTTGGTTAAGATTCTCACTCG
GACCAAACTGCCCTCAGGGCTTCACGAATTCTTGAACATTCTCAGGGCGTTGTTTGGGAATAAGGTTTATGACGTGAAGCACATGATGCGGTTCTGTGATGGCCTTTACG
GGGGTTTGGACCGGCTTGCTAAGACGCTTGATTTGGACCGTGCGGTTGGTAAATGCCATCAGGCCGGTTCTGATTCCCTCCTCACCTGGCAAGCTTTTAAGAAGATGAGG
GATGTTTTTTTTTTAAAGGATGGCCCGGAGAAGCACGCCGGCGTTTTGTTTGGATTAGAAGTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCCAAACCCGTCAGGTCTGGGATTTCAATCTCCTTCACGAATTCAATCTAATCAATCATCTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCC
GGGCGTCCTGATCCGCCCCACTCTCCACCGCCACCCTCTCCGCCCTTCAGATCACTACCTTCTCCTGAAGTCCAACGTGGACGCTCTAAACCTAATCCAACTGGGTCTCA
CTCTGGATTTCGACGTTGCACGTGACCCTCACGCGCCGGATTCCATCGAGCTGTTAAAACAACAGGGGATTGATTTCGAGCGCAACAGAGTTCATGGGGTTTACTCCTCC
CGGTTCGCGGACTTGCTGATGTCATCGGGTGTTTTGTGTAATGACTCCGTTACATGGGTTACTTTTCATAGTGCCTATGATTTTGGTTACTTGGTTAAGATTCTCACTCG
GACCAAACTGCCCTCAGGGCTTCACGAATTCTTGAACATTCTCAGGGCGTTGTTTGGGAATAAGGTTTATGACGTGAAGCACATGATGCGGTTCTGTGATGGCCTTTACG
GGGGTTTGGACCGGCTTGCTAAGACGCTTGATTTGGACCGTGCGGTTGGTAAATGCCATCAGGCCGGTTCTGATTCCCTCCTCACCTGGCAAGCTTTTAAGAAGATGAGG
GATGTTTTTTTTTTAAAGGATGGCCCGGAGAAGCACGCCGGCGTTTTGTTTGGATTAGAAGTCTATTAA
Protein sequenceShow/hide protein sequence
MLIQTRQVWDFNLLHEFNLINHLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLKSNVDALNLIQLGLTLDFDVARDPHAPDSIELLKQQGIDFERNRVHGVYSS
RFADLLMSSGVLCNDSVTWVTFHSAYDFGYLVKILTRTKLPSGLHEFLNILRALFGNKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKCHQAGSDSLLTWQAFKKMR
DVFFLKDGPEKHAGVLFGLEVY