CuGenDBv2

Gene ID	PI0007344
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	chr06:29105922..29108190
RNA-Seq Expression	PI0007344
Synteny	PI0007344
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

1.8e-134

94.85

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNP   SSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPE A      +ES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

5.9e-138

95.94

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLST SP SHHTTHFSFRPFSSLRTRNP    SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPE AK+ PEEQES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

6.1e-135

95.22

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNP   SSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPE A      +ES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

1.6e-114

83.76

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS               ADNGAGISGGS  VAVE  V QKDPE A    E++ES A TNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAA EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

3.6e-135

94.46

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNP      SSSSLFTIRATADNGAGISGGSA VAVETPVEQKDPE AK V EEQES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEE VEVVSKFEDPKW+NGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGKM
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

2.8e-138

95.94

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLST SP SHHTTHFSFRPFSSLRTRNP    SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPE AK+ PEEQES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A1S3BLD8 uncharacterized protein LOC103490842

2.9e-135

95.22

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNP   SSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPE A      +ES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A5A7TG76 Uncharacterized protein

8.6e-135

94.85

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNP   SSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPE A      +ES AGTNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGK+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-SGSGKM

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

9.9e-115

83.39

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS               ADNGAGISGGS  VAVE+ V QKDPE    V E+QE  A TNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAA EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.5e-115

83.76

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS               ADNGAGISGGS  VAVE  V QKDPE A    E++ES A TNGS
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGS

Query:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
        VAA EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMA
Subjt:  VAAAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM
        YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

3.4e-72

56.51

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTI-RATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGSV
        SMALFSP    S  +P              +L  +  +S  S+   SL ++ RA++DNG      S  V +  P      E+    P E  S A  NG+V
Subjt:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTI-RATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGSV

Query:  A--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFM
           A +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFM
Subjt:  A--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFM

Query:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        AYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.9e-75

57.51

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVE--QKDPELAKVVPEEQESPAGTNGSV
        MALFSP    S+L  + +    FSF           S  SS+  S L   RA++D+G+     + +V    PVE   K+P  +    +++E+    N +V
Subjt:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVE--QKDPELAKVVPEEQESPAGTNGSV

Query:  AAAE-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
           E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMA
Subjt:  AAAE-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        YFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

1.4e-76

57.51

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVE--QKDPELAKVVPEEQESPAGTNGSV
        MALFSP    S+L  + +    FSF           S  SS+  S L   RA++D+G+     + +V    PVE   K+P  +    +++E+    N +V
Subjt:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVE--QKDPELAKVVPEEQESPAGTNGSV

Query:  AAAE-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA
           E +  E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMA
Subjt:  AAAE-EVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK
        YFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETSGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

2.4e-73

56.51

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTI-RATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGSV
        SMALFSP    S  +P              +L  +  +S  S+   SL ++ RA++DNG      S  V +  P      E+    P E  S A  NG+V
Subjt:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTI-RATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGSV

Query:  A--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFM
           A +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFM
Subjt:  A--AAEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFM

Query:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS
        AYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACGCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACCAG
AAACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATTTCGGGTGGTTCAGCCACTGTTGCTGTAGAAA
CCCCCGTCGAACAGAAGGATCCGGAGCTGGCCAAGGTTGTACCGGAAGAGCAGGAGAGCCCCGCCGGAACCAATGGGTCGGTGGCAGCTGCCGAAGAAGTGGTGGAGGTG
GTTAGCAAATTTGAGGACCCTAAATGGGTTAATGGGACTTGGGATCTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGAAG
GAGGAAATGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTCGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAG
AGGCTGAGCTACTCAATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACCGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGC
AAAACATTGCTATTTGTTGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAACGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATG
GCAAGCAACTTGGCAGGATGAAACCTCAGGCTCAGGCAAAATGTAA

mRNA sequence

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GTACAAGTGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAGCTTAGAGCAGAAGCTCTCTCCCTCCCTTCTCCATAACAACAATGTCGTCCATGGCTTT
GTTTTCTCCTTCATCCCATCTTTCTACGCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACCAGAAACCCTTCTTCTTCTT
CTTCTTCTTCTTCTTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATTTCGGGTGGTTCAGCCACTGTTGCTGTAGAAACCCCCGTCGAACAGAAG
GATCCGGAGCTGGCCAAGGTTGTACCGGAAGAGCAGGAGAGCCCCGCCGGAACCAATGGGTCGGTGGCAGCTGCCGAAGAAGTGGTGGAGGTGGTTAGCAAATTTGAGGA
CCCTAAATGGGTTAATGGGACTTGGGATCTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGAAGGAGGAAATGGTTGGAAA
ACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTCGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAAT
GGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACCGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTTGT
TGCTGTGGTGGGAGTTCTTTTGATAAGAAAGAACGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGG
ATGAAACCTCAGGCTCAGGCAAAATGTAATATGGGAAAAGTTGCCTGTTTCTTGTTTTGTATTGACTATGTTTGTATCTCTAAAGATTTGGGCTAAGTAAGTAGAGAAAA
GATAATGTGAGCTCTGAAAGATACTAAATTTTTAGGCCTCAGTTTAATGCTTCTTGAAGTTAAGGCTTCTTGAGGGTTTCAATGAAAATCTCTCCAGAAGAGCCTTGGTT
TCTGGAAATATGGGTTTGAGGGTTCAGCTATTGTGATGGATTTATTATCAGATTTAGCTCAATCAGTTTCCCAAAATTCCATTTTCGTTGTGCAAGAAGTCACGTGGGGA
AATTTTGGTTTGGTGTATAGGGCCCTTTATTAACAGATGCATTTATATATACATACGCCTAAAGGAGTCTTGAAGATGAATCATCCACCCAAGATTTGAGCATTTATTGA
ACTCAAAAGGGG

Protein sequence

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MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPELAKVVPEEQESPAGTNGSVAAAEEVVEV
VSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFC
KTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSGSGKM

PI0007344 (gene) of Melon (PI 482460) v1 genome