CuGenDBv2

Gene ID	PI0007348
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Reticulon domain-containing protein
Genome location	chr09:16855842..16859914
RNA-Seq Expression	PI0007348
Synteny	PI0007348
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003388 - Reticulon IPR044177 - Reticulon-like protein B22/B23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0040534.1 reticulon-like protein B23 isoform X1 [Cucumis melo var. makuwa]

7.8e-79

85.79

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKMINMHDDLIGHFSMLFTRHVVKHCS
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYT                         GHFSMLFTRHVVKHCS
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKMINMHDDLIGHFSMLFTRHVVKHCS

XP_008465702.1 PREDICTED: reticulon-like protein B23 isoform X1 [Cucumis melo]

3.8e-73

98.67

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

5.8e-74

93.83

Show/hide

Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

1.1e-75

94.48

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Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

2.1e-71

89.51

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIG R EGLR+T+MA+R+INCKTEVGKPFVALICGSL+YYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

5.1e-76

94.48

Show/hide

Query:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIA
        MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIA
Subjt:  MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIA

Query:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  WLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

A0A1S3CPH6 reticulon-like protein B22 isoform X2

2.8e-74

93.83

Show/hide

Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

A0A1S3CQY5 reticulon-like protein B23 isoform X1

1.8e-73

98.67

Show/hide

Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTG

A0A5D3C5B3 Reticulon-like protein B23 isoform X1

3.8e-79

85.79

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKMINMHDDLIGHFSMLFTRHVVKHCS
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYT                         GHFSMLFTRHVVKHCS
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKMINMHDDLIGHFSMLFTRHVVKHCS

A0A6J1I734 reticulon-like protein B22 isoform X1

2.3e-68

87.04

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Query:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTG+  L  C+Y  L
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFL

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

1.4e-46

75.4

Show/hide

Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY L+ LGR++SGVT+AY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Q8GWH5 Reticulon-like protein B22

5.1e-49

78.57

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Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY LS LGRL+SGVTVAY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

9.9e-48

75.4

Show/hide

Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY L+ LGR++SGVT+AY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

AT1G78895.1 Reticulon family protein

3.7e-50

78.57

Show/hide

Query:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    LI G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGM
        KVV+CLY LS LGRL+SGVTVAY G+
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACAAATGGCGAGTCGATCAATCAACTGTAAGACAGAAGTTGGCAAACCCTTTGTTGCTCTCATTTG
CGGTTCATTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCT
TCCGTCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATTGGTGCGGCTGAG
TCTGTTCTGAGGGTGGCAGCTACAGGGCACGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGGTGTTACAGT
TGCCTACACTGGTATGTCTGGCCTTCCTAATTGCCTCTACTTTTTTCTATCTTACAAGATGATAAATATGCATGATGATTTGATAGGACATTTTTCTATGCTCTTCACTC
GTCATGTGGTGAAGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGGCCTTAG

mRNA sequence

Show/hide mRNA sequence

ATATTGGTGAGGAAAGATATAGAAAATTAAAGAAAAGAAAGGTGGAAGGGAAGACTGGGCGTTATGGGTTTGACGAATCATAGAATTTGATATTTGGCAAAGCGTAGAGA
GGGCGGAGGATGATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACAAATGGCGAGTCGATCAATCAACTGTAAGACAGAAGTTGGCAAACCCTTTGTTGC
TCTCATTTGCGGTTCATTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCG
GCCTTCTCTTCCGTCATATGAATGTCTCGGTTCCAGTAGACCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATTGGT
GCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCACGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGG
TGTTACAGTTGCCTACACTGGTATGTCTGGCCTTCCTAATTGCCTCTACTTTTTTCTATCTTACAAGATGATAAATATGCATGATGATTTGATAGGACATTTTTCTATGC
TCTTCACTCGTCATGTGGTGAAGCATTGCAGTTTAATTTGTTTTACCAATCTGATTTGGCCTTAGCAGTTACACATACCCTATTTGCAATTTTGCTACACTTATTGTTAT
AATTTTAAAAGATTATGCCGAGTCTCATTTCTGTTTATATTAGGGATAGTTAAATTCTTTTTGCATATTTATGGAACCCGTCTGCAATTGATTCTAGTAGCTCTGGATTA
ACAGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTCCTTAGGAGAGGAAATGAACGTACTTCACATCAAGA
TGCTATCTAATCTTCACTGGCTGTTACCCTGTTTTTTCTTTTCTTTTTTTCACTGTAGATGAATTCATCTGTGAATATTACCGTTAACAGAATGTGTTTAGGTGGAATGG
AGTAATAAATTTATTTGATGGAAATAGAATTTTAGGAGTCACTGTTGATTACTGATTGAGCATTGTGAGGATCTGTTCAGTTGAAGTGAGTTGTTGTATGGTAAAGAAAA
TATTTGCCACAACACTCACTTGGGCTAATGCAATATTTGTACCAAGTTCCAAGGGGATGTAAACATGTTTAGAAGCAAGTTTGGTTTGATTCTACAATCTCACCTTAATA
GGATTTGTTAGGTTGTACCACTACTTCCTTGAATTCTAAAGTTTGGTTTGTTTGTTTGCTC

Protein sequence

Show/hide protein sequence

MMSQIGGRIEGLRDTQMASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAE
SVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGMSGLPNCLYFFLSYKMINMHDDLIGHFSMLFTRHVVKHCSLICFTNLIWP

PI0007348 (gene) of Melon (PI 482460) v1 genome