CuGenDBv2

Gene ID	PI0007354
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Chlororespiratory reduction 3
Genome location	chr10:6216999..6221868
RNA-Seq Expression	PI0007354
Synteny	PI0007354
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR038931 - Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600832.1 putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-67

83.54

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MA    IS+TKNVA ASLNP  +  SHSPP KTN AA TIPI NPRLRR+L KPRRPSVIEIERAIG GRFRD DPRDLEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPFNTPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL

XP_004142275.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucumis sativus]

1.4e-79

93.33

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MASLFSIS TKNVAFASLNPD +SHSHSPPLKTN AA TIPINNPRLRRKLL P RPS+IEIERAIGGGRFRD DPR+LEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

XP_008464703.1 PREDICTED: probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1 [Cucumis melo]

1.2e-83

92.13

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Query:  MQLWFLISGTPMASLFSISITKNVAFASLNPD--GNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAF
        MQL FLI GTPMASLFSISITKNVA ASLNP+   +SHSHSPPLKTNDAADTIPI  PRLR KLL PRRPSVIEIERAIGGGRFRD DPRDLEEDKKAAF
Subjt:  MQLWFLISGTPMASLFSISITKNVAFASLNPD--GNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAF

Query:  DMFLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        DMFLMSFTGKYE PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
Subjt:  DMFLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

XP_023511915.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo]

2.4e-68

84.15

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MA  F IS+TKNVA ASLNP  +  SHSPP KTN AA+TIPI NPRLRR+L KPRRPSVIEIERAIG GRFRD DPRDLEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPFNTPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL

XP_038893324.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Benincasa hispida]

7.8e-75

88.48

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MAS FSIS+TKNV  ASLNP     SHSPP KTN AA+TIPINNPRLRR+L KPRRPSVIEIERAIGGGRFRD DPRDLEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        P+MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPFNTPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJA3 Uncharacterized protein

6.7e-80

93.33

Show/hide

Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MASLFSIS TKNVAFASLNPD +SHSHSPPLKTN AA TIPINNPRLRRKLL P RPS+IEIERAIGGGRFRD DPR+LEEDKKAAFDMFLMSFTGKYEA
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPF+TPFLNELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

A0A1S3CM65 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1

5.8e-84

92.13

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Query:  MQLWFLISGTPMASLFSISITKNVAFASLNPD--GNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAF
        MQL FLI GTPMASLFSISITKNVA ASLNP+   +SHSHSPPLKTNDAADTIPI  PRLR KLL PRRPSVIEIERAIGGGRFRD DPRDLEEDKKAAF
Subjt:  MQLWFLISGTPMASLFSISITKNVAFASLNPD--GNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAF

Query:  DMFLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        DMFLMSFTGKYE PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
Subjt:  DMFLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

A0A6J1DQ49 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

2.0e-63

79.39

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        +AS   IS+TKNVA ASLN  G+  SHSP  K N  ADTIPI N    R+L KPRRPSVIEIERAIG GRFRD DPRDLEED+K  FDMFL+SFT KYE 
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
        PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASGVIKLPF+TPFL+ELLM
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

A0A6J1FSN9 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

2.2e-67

83.54

Show/hide

Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA
        MA    IS+TKNVA ASLNP  +  SHSPP KTN AA TIPI NPRLRR+L KPRRPSVIEIERAIG GRFRD DPRDLEED+KAAFDMFLMSFTGKYE 
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYEA

Query:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL
         LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPFNTPFL++LL
Subjt:  PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL

A0A6J1J6W0 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

3.8e-67

82.04

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Query:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLR---RKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGK
        MA  F IS+TKNVA ASLNP  +  SHSPP KTN AA+TIP+NNP+LR   R+L KPRRPSVIEIERAIG GRFRD DPRDLEED+KAAFDMFLMSFTGK
Subjt:  MASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLR---RKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGK

Query:  YEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL
        YE  LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASGVIKLPFNTPFL++LL
Subjt:  YEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELL

SwissProt top hits

e value

%identity

Alignment

Q9ZVE7 Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

1.3e-24

40.34

Show/hide

Query:  MASLFSISITKNVAFASLNPDGNSH-SHSPPLKTNDAADTIPINNPRLRRKLLKP----------RRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDM
        +++++SI+       ASL  D  S    S P K    + T P   P   R++ K            +PS+ +IERA G G +RD++    E D    FD 
Subjt:  MASLFSISITKNVAFASLNPDGNSH-SHSPPLKTNDAADTIPINNPRLRRKLLKP----------RRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPF+ PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

Arabidopsis top hits

e value

%identity

Alignment

AT2G01590.1 chlororespiratory reduction 3

9.4e-26

40.34

Show/hide

Query:  MASLFSISITKNVAFASLNPDGNSH-SHSPPLKTNDAADTIPINNPRLRRKLLKP----------RRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDM
        +++++SI+       ASL  D  S    S P K    + T P   P   R++ K            +PS+ +IERA G G +RD++    E D    FD 
Subjt:  MASLFSISITKNVAFASLNPDGNSH-SHSPPLKTNDAADTIPINNPRLRRKLLKP----------RRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDM

Query:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM
         L+    K+E+ + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPF+ PFL++L+M
Subjt:  FLMSFTGKYEAPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

Sequences

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CDS sequence

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ATGCAACTATGGTTTCTTATCTCTGGAACACCAATGGCTTCCCTCTTCTCCATTTCTATAACCAAAAATGTGGCTTTCGCTTCACTCAATCCCGACGGCAACTCTCACTC
TCACTCTCCTCCTCTCAAAACCAATGACGCAGCCGACACCATTCCGATCAACAACCCCCGGCTACGCCGAAAGCTTCTAAAGCCTCGTCGCCCCTCCGTCATTGAAATCG
AACGTGCTATTGGTGGTGGAAGGTTCAGAGACACTGACCCTAGGGATTTGGAAGAAGATAAGAAGGCTGCATTTGACATGTTTTTGATGAGTTTTACGGGAAAATATGAA
GCGCCACTCATGAAAAAGCTTCGTGAGACAGGGGAATGGGTAACTAATCAAACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGT
TCTTCCAATTTGGGCATTGTCACTTCTCGTGGCTTCTGGGGTCATTAAGCTACCATTCAACACTCCATTTCTTAATGAACTTCTCATGTAG

mRNA sequence

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AAATTTTCCAAAACTTTATTTATAACAAAATATCTTTAATTTATGCAACTATGGTTTCTTATCTCTGGAACACCAATGGCTTCCCTCTTCTCCATTTCTATAACCAAAAA
TGTGGCTTTCGCTTCACTCAATCCCGACGGCAACTCTCACTCTCACTCTCCTCCTCTCAAAACCAATGACGCAGCCGACACCATTCCGATCAACAACCCCCGGCTACGCC
GAAAGCTTCTAAAGCCTCGTCGCCCCTCCGTCATTGAAATCGAACGTGCTATTGGTGGTGGAAGGTTCAGAGACACTGACCCTAGGGATTTGGAAGAAGATAAGAAGGCT
GCATTTGACATGTTTTTGATGAGTTTTACGGGAAAATATGAAGCGCCACTCATGAAAAAGCTTCGTGAGACAGGGGAATGGGTAACTAATCAAACTGAAACCAAATTTCA
AGCTTCGGGAAAATGGTTTCTGTTGTTTACATTTCAATGGGTTCTTCCAATTTGGGCATTGTCACTTCTCGTGGCTTCTGGGGTCATTAAGCTACCATTCAACACTCCAT
TTCTTAATGAACTTCTCATGTAGTAAGGAATGGTGGTGGAGCACGACGATAGGGAGTAACGGCGGCGGCTGGATAGCCGTCGAACGAAGCAGCGGAGTACGGTGATCTGA
GAGAGAAAGTGAAGGAGTGAGAGAAAGAGAAAGATGGAATCAATATTACCGGCAGAGGAGAGAGGGATTCTGTGGGTGACAAAACTCATATATGTGTCTGTATATATATA
TCCAACTCACTTCAATTTTTCATTTAAAATATCATTATAACAAAAATAAAATCCATATATTCAGATCAATTATATCTTAAAAAAACTACTAATAGGCAATGAAAAACTTT
TATTAACTTAGTTTTGTATCAGTTTTTTCATCGATAGTATCAGTGATAGACTTCTATCAATTTTTATAAGTGATAGACTTCTATCAATTTTTATAATTGATAGACATCAA
TAGACTTGATGATATACTTATATCAGTTTTCTATCAATGATCAATGATAGATGATAATAGACTTATTTAGCGTCTATCTAGGTTGTAAAGAAAGATAGAAAATTT

Protein sequence

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MQLWFLISGTPMASLFSISITKNVAFASLNPDGNSHSHSPPLKTNDAADTIPINNPRLRRKLLKPRRPSVIEIERAIGGGRFRDTDPRDLEEDKKAAFDMFLMSFTGKYE
APLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGVIKLPFNTPFLNELLM

PI0007354 (gene) of Melon (PI 482460) v1 genome