CuGenDBv2

Gene ID	PI0007355
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	chr02:837418..841162
RNA-Seq Expression	PI0007355
Synteny	PI0007355
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050889.1 eukaryotic translation initiation factor 6-2 [Cucumis melo var. makuwa]

4.0e-129

97.14

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIP VKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVV+QRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

KAE8653368.1 hypothetical protein Csa_006911 [Cucumis sativus]

2.9e-127

97.51

Show/hide

Query:  LMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQERLSAL
        LMFENSCDIGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRIQERLSAL
Subjt:  LMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQERLSAL

Query:  GNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTANDWTA
        GNTIACNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTANDWTA
Subjt:  GNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTANDWTA

Query:  FCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        FCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  FCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_004135618.1 eukaryotic translation initiation factor 6-2 [Cucumis sativus]

6.9e-129

97.14

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA RLMFENSCDIGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_008450645.1 PREDICTED: eukaryotic translation initiation factor 6-2 [Cucumis melo]

1.4e-129

97.55

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVV+QRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

7.1e-126

95.51

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYS FETEL GVIPVVKASI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETE+LIADVLGVEVFRQTVAGNVLVGSY SFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIE+VFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M1J5 Eukaryotic translation initiation factor 6

3.3e-129

97.14

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA RLMFENSCDIGVFSKLTNAYCLVAIGGSENFYS FETE+RGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAH+DLDRETE+LIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A1S3BPM8 Eukaryotic translation initiation factor 6

6.7e-130

97.55

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVV+QRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A5A7UBH8 Eukaryotic translation initiation factor 6

1.9e-129

97.14

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIP VKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVV+QRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A5D3CEP2 Eukaryotic translation initiation factor 6

6.7e-130

97.55

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVV+QRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

A0A6J1D392 Eukaryotic translation initiation factor 6

1.7e-125

94.69

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRLMFENSC+IGVFSKLTNAYCLVAIGGSENFYSAFE+EL GVIPVVKASI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRIQER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAHTDLDRETE+LIADVLGVEVFRQTVAGNVLVGSY SFTNRGGLVHPHTS+EDLDELSTLLQVP+VAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DW AFCGSDTTATELSVIE+VFKLREAQPSSIV+EMRKSLIDS+V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

4.5e-99

72.84

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA R  FEN+C++G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+R+SLPD V ++R++ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETE+++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVP+VAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

4.5e-99

73.25

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA R  FEN+C+IG F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+R+SLPD V ++R++ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETE+++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVP+VAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

1.3e-98

72.43

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA R  FEN+C++G F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+R+SLPD V ++R++ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETE+++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVP+VAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

3.5e-120

85.71

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRL FEN+C++GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VK SIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRI ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAHTDLD+ETE++IADVLGVEVFRQT+AGN+LVGSY + +N+GG+VHPHTSVEDL+ELSTLLQVP+VAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWT+FCGSDTTATELSVI+++FKLREAQPSSIV+EMRKSLID++V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

Q9TU47 Eukaryotic translation initiation factor 6

1.5e-99

73.25

Show/hide

Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MA R  FEN+C+IG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV ASI G RIIGR+C GN++GLLVP+ TTDQELQH+R+ LPD V ++R++ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETE+++ADVL VEVFRQTVA  VLVGSY  F+N+GGLVHP TS+ED DELS+LLQVP+VAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+E+VFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

5.8e-94

67.21

Show/hide

Query:  MATRLMFE-NSCDIGVFSKLTNAYCLV-AIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQ
        MATRL ++ N+C+IGVFSKLTNAYCLV A   S NF++ +E++L+GVIP+V  SIGG+  IG LC GNKNGLL+ HT TDQELQHLRDSLPD+VVVQRI+
Subjt:  MATRLMFE-NSCDIGVFSKLTNAYCLV-AIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLT
        E + ALGN IACND+VAL H  L+++TE++I+DVLGVEV+RQT+A N LVGSY S +N GG+VH +T+VE++ EL+ L+QVP+VAGTVNRGS+VI+AGLT
Subjt:  ERLSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLT

Query:  ANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
         NDWTAFCGSDTTA ELSV+ N+FKL ++QP  +  EMRKSLID++V
Subjt:  ANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

AT3G55620.1 Translation initiation factor IF6

2.5e-121

85.71

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Query:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER
        MATRL FEN+C++GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VK SIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLR+SLPDQVVVQRI ER
Subjt:  MATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRDSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAHTDLD+ETE++IADVLGVEVFRQT+AGN+LVGSY + +N+GG+VHPHTSVEDL+ELSTLLQVP+VAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVPIVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV
        DWT+FCGSDTTATELSVI+++FKLREAQPSSIV+EMRKSLID++V
Subjt:  DWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

Sequences

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CDS sequence

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ATGCAAGTAGATTTCAACCTGTTGGCTTCGTTATGTAGTTTACATTTGGGGTTGCAAGGGACTTTGAGTTTATTGCCAGGGAGGTTGTTGTTGATTCTTCAAGGTTACCG
TGTGCAACTCATGGCGACCAGGCTTATGTTTGAGAACTCATGTGACATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATT
TCTACAGTGCCTTTGAAACTGAACTACGTGGTGTCATTCCGGTTGTCAAAGCATCTATTGGTGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTT
CTTGTACCACACACCACTACTGATCAAGAACTTCAGCACTTGAGGGACAGTTTGCCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAACAC
GATTGCTTGTAATGATCACGTTGCTCTCGCACATACGGATCTTGACCGGGAAACTGAAGACCTCATCGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCCG
GCAACGTTCTCGTAGGAAGCTACTCTAGTTTTACGAATAGGGGAGGCTTGGTTCATCCACATACATCCGTTGAAGATTTGGACGAGCTATCAACCCTTCTTCAGGTCCCG
ATAGTCGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCGGCTGGATTAACAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACCACTGCCACGGAGTTATCGGT
CATCGAGAATGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTCGAAGAAATGAGGAAGTCATTAATTGACAGTCATGTGTGA

mRNA sequence

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AGCCTGTTTGGTGTGTTTCAATAGCTTAGGAGCACTCTAGAACGATATGCAAGTAGATTTCAACCTGTTGGCTTCGTTATGTAGTTTACATTTGGGGTTGCAAGGGACTT
TGAGTTTATTGCCAGGGAGGTTGTTGTTGATTCTTCAAGGTTACCGTGTGCAACTCATGGCGACCAGGCTTATGTTTGAGAACTCATGTGACATTGGGGTTTTCTCCAAG
CTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTGCCTTTGAAACTGAACTACGTGGTGTCATTCCGGTTGTCAAAGCATCTATTGGTGG
CACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGATCAAGAACTTCAGCACTTGAGGGACAGTTTGCCTGACCAAG
TTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAACACGATTGCTTGTAATGATCACGTTGCTCTCGCACATACGGATCTTGACCGGGAAACTGAAGACCTC
ATCGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCCGGCAACGTTCTCGTAGGAAGCTACTCTAGTTTTACGAATAGGGGAGGCTTGGTTCATCCACATAC
ATCCGTTGAAGATTTGGACGAGCTATCAACCCTTCTTCAGGTCCCGATAGTCGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCGGCTGGATTAACAGCAAATGACT
GGACTGCATTTTGTGGTTCAGACACCACTGCCACGGAGTTATCGGTCATCGAGAATGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTCGAAGAAATGAGGAAG
TCATTAATTGACAGTCATGTGTGAGGAGTTTCTTCTTCTACTACACCTTGAGATTTGCAAGCAATTAATTGTTATTACTGTCTTTATCTTCATCTGTTATATTTAACGAC
TTTGTGAGTGTGAAATTTGACCATCCACTAAATTTGATTAAGATTGGGGTTGTATACTTAGATATCATTAGATATCATTGTCTTGGTCTTGTATTATTGTTCCCATTACC
TAAGGTTAATCAGTAACGATATCTGTAATAGTAACAATACTTATGACATATTTATAATTCTCTTACTATGATAATAATAGTATTTGTAACTGCAATGGGTAACAATTGAA
AATTCCTTCA

Protein sequence

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MQVDFNLLASLCSLHLGLQGTLSLLPGRLLLILQGYRVQLMATRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIGRLCAGNKNGL
LVPHTTTDQELQHLRDSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP
IVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSLIDSHV

PI0007355 (gene) of Melon (PI 482460) v1 genome