CuGenDBv2

Gene ID	PI0007371
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Ribosome biogenesis NEP1-like protein
Genome location	chr11:1335769..1337136
RNA-Seq Expression	PI0007371
Synteny	PI0007371
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADN33694.1 hypothetical protein [Cucumis melo subsp. melo]

1.6e-61

Show/hide

Query:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSA
        MLV TRIQGNRRFASSTTA SAN   ++SSSS  G  GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRESIPEVEDPDT+ITSA
Subjt:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSA

Query:  DKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        DKFINKSFLRKVAHIQD+TKTLPDPVH +PFTRPR AETLKTAGVDPTRR
Subjt:  DKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

KAA0039866.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa]

1.0e-63

90.73

Show/hide

Query:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSG-SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITS
        MLV TRIQGNRRFASSTTA SAN   ++SSSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRESIPEVEDPDT+ITS
Subjt:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSG-SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITS

Query:  ADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQD+TKTLPDPVHP+PFTRPR AETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

XP_004140656.2 uncharacterized protein LOC101206372 [Cucumis sativus]

4.2e-70

88.69

Show/hide

Query:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNAS--SSSSKGGS-GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKK
        M LFRTSL +KMWKSMLVETRIQGNRRF+SSTT  SANNIQNAS  SSSS GGS GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKK
Subjt:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNAS--SSSSKGGS-GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKK

Query:  KRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        KRESIPEVEDPDT+ITSADKFINKSFLRKVAHIQ +TKTL DPVHP+PFTRPR AETLKTAG+DPTRR
Subjt:  KRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

XP_008459927.1 PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]

1.0e-68

87.27

Show/hide

Query:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRE
        M+LFRTSL +KMWKSMLV TRIQGNRRFASSTTA SAN   ++SSSS  G  GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRE
Subjt:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRE

Query:  SIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        SIPEVEDPDT+ITSADKFINKSFLRKVAHIQD+TKTLPDPVH +PFTRPR AETLKTAGVDPTRR
Subjt:  SIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

XP_038906484.1 uncharacterized protein LOC120092464 [Benincasa hispida]

2.1e-66

82.46

Show/hide

Query:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSK------GGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNF
        MALF TSLT+K+WK+MLV +RIQG RR ASSTTA +ANNIQ ASSSSS       G S SEYMKGEYAPIYIV+GMVAV VSI THTAKQQLLHSP VNF
Subjt:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSK------GGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNF

Query:  SKKKRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        SKKKRESIPEV+DPDTII SA+KFINKSFLRKVAHIQ++TKTLPDPVHPNPFTRPR AETLKTAGVDPTRR
Subjt:  SKKKRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC39 Uncharacterized protein

2.0e-70

88.69

Show/hide

Query:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNAS--SSSSKGGS-GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKK
        M LFRTSL +KMWKSMLVETRIQGNRRF+SSTT  SANNIQNAS  SSSS GGS GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKK
Subjt:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNAS--SSSSKGGS-GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKK

Query:  KRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        KRESIPEVEDPDT+ITSADKFINKSFLRKVAHIQ +TKTL DPVHP+PFTRPR AETLKTAG+DPTRR
Subjt:  KRESIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

A0A1S3CBE5 uncharacterized protein LOC103498899

5.0e-69

87.27

Show/hide

Query:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRE
        M+LFRTSL +KMWKSMLV TRIQGNRRFASSTTA SAN   ++SSSS  G  GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRE
Subjt:  MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRE

Query:  SIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        SIPEVEDPDT+ITSADKFINKSFLRKVAHIQD+TKTLPDPVH +PFTRPR AETLKTAGVDPTRR
Subjt:  SIPEVEDPDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

A0A5D3DLZ1 Putative Ribosome biogenesis protein NEP1-like

4.8e-64

90.73

Show/hide

Query:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSG-SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITS
        MLV TRIQGNRRFASSTTA SAN   ++SSSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRESIPEVEDPDT+ITS
Subjt:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSG-SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITS

Query:  ADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQD+TKTLPDPVHP+PFTRPR AETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

A0A6J1D5I0 uncharacterized protein LOC111017496 isoform X1

7.2e-52

76.28

Show/hide

Query:  SKMWKSMLV--ETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVED
        +K+WKSMLV   +RI+G R FASSTTAS        SSSSSK    SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP V  SKKKRESIPEV+D
Subjt:  SKMWKSMLV--ETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVED

Query:  PDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPT
        PDT+ITSADKF+NKSFLRKVAHIQD  KTL DP HP+PFTRPR AETLKTAGVDPT
Subjt:  PDTIITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPT

E5GB52 Uncharacterized protein

7.7e-62

Show/hide

Query:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSA
        MLV TRIQGNRRFASSTTA SAN   ++SSSS  G  GSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSP VN SKKKRESIPEVEDPDT+ITSA
Subjt:  MLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSA

Query:  DKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR
        DKFINKSFLRKVAHIQD+TKTLPDPVH +PFTRPR AETLKTAGVDPTRR
Subjt:  DKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G63060.1 unknown protein

4.7e-27

46.58

Show/hide

Query:  VETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSADK
        V  +  G+RRFA +T A  A    N  S           + GE+AP+ I+ G V + V +A H+ KQQL+H+PA++  K +R ++ EV+DP+  ++SADK
Subjt:  VETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSADK

Query:  FINKSFLRKVAHIQDETKT-LPDPVHPNPFTRPRTAETLKTAGVDP
        FINKS+LRKV  IQD++K  L DP  PNPFT PR AETL + GV P
Subjt:  FINKSFLRKVAHIQDETKT-LPDPVHPNPFTRPRTAETLKTAGVDP

AT5G07330.1 unknown protein

8.0e-19

33.1

Show/hide

Query:  IQGNRRFASSTTASSANNIQNASS--SSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSADKFI
        +Q  R +  +TT   +     A++     +  + +   KG++ P+Y+ +G++++ V+   +TA   L  +P V  +KK RE++PE+EDPD ++  AD+F 
Subjt:  IQGNRRFASSTTASSANNIQNASS--SSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDTIITSADKFI

Query:  NKSFLRKVAHIQ--DETKTLPDPVHPNPFTRPRTAETLKTAGVDP
        N+S+ RK+AH+Q  D+   + DP+  + F     A TLK  GVDP
Subjt:  NKSFLRKVAHIQ--DETKTLPDPVHPNPFTRPRTAETLKTAGVDP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTTATTCAGAACCTCTCTCACAAGCAAGATGTGGAAATCAATGCTTGTCGAAACTAGGATCCAAGGGAACCGTCGTTTTGCTTCATCCACTACTGCCTCATCTGC
CAATAATATTCAAAATGCTTCTTCTTCTTCTTCGAAGGGCGGTTCCGGTAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGG
TCGTGTCTATCGCAACCCACACGGCGAAGCAGCAGTTACTGCATTCGCCGGCGGTTAATTTCAGTAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACC
ATCATCACATCTGCTGACAAATTTATCAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAAGATGAAACCAAGACGCTACCCGATCCAGTCCATCCCAACCCATTTAC
CCGGCCACGTACTGCGGAAACTCTGAAAACTGCTGGAGTGGATCCTACCCGCCGTTGA

mRNA sequence

Show/hide mRNA sequence

CATTTCGTAGTTAAAATTCTGAAATCCCACAAAAAAATAATGGCTTTATTCAGAACCTCTCTCACAAGCAAGATGTGGAAATCAATGCTTGTCGAAACTAGGATCCAAGG
GAACCGTCGTTTTGCTTCATCCACTACTGCCTCATCTGCCAATAATATTCAAAATGCTTCTTCTTCTTCTTCGAAGGGCGGTTCCGGTAGCGAGTACATGAAAGGCGAGT
ACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTCGTGTCTATCGCAACCCACACGGCGAAGCAGCAGTTACTGCATTCGCCGGCGGTTAATTTCAGTAAGAAG
AAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACCATCATCACATCTGCTGACAAATTTATCAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAAGATGAAAC
CAAGACGCTACCCGATCCAGTCCATCCCAACCCATTTACCCGGCCACGTACTGCGGAAACTCTGAAAACTGCTGGAGTGGATCCTACCCGCCGTTGAACAACTATGAAAA
AAAACTTGGATGCTTCTAAAATGCACTAATCATTGTTCTTAATTATATTATTCTTTCTTGGTGATATGTGTATTGTTGTGTGTGTGTATATATTTAAATATAATAGGGCC
CTTCTCTACTTCTGCTTTTCTCTTCACTTTCTTTGTATTGACACTCAAGATTCTTCAAAAGTAGAAGTACTAGCTACTGCTAGGGAATGTGGCCCCTTATTTAATTTGTT
AGTTTTATTGATTTTCTTTTTCGGACAATAAAGCCAATTTAATTGGAATACCGTAAATCTTGGTTTTGGGA

Protein sequence

Show/hide protein sequence

MALFRTSLTSKMWKSMLVETRIQGNRRFASSTTASSANNIQNASSSSSKGGSGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPAVNFSKKKRESIPEVEDPDT
IITSADKFINKSFLRKVAHIQDETKTLPDPVHPNPFTRPRTAETLKTAGVDPTRR

PI0007371 (gene) of Melon (PI 482460) v1 genome