CuGenDBv2

Gene ID	PI0007374
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S4, chloroplastic
Genome location	tig00003793:4066..4671
RNA-Seq Expression	PI0007374
Synteny	PI0007374
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_004841785.1 ribosomal protein S4 [Cucumis melo subsp. melo]

8.3e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_009456148.1 ribosomal protein S4 [Lagenaria siceraria]

3.2e-104

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSR LIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_009751487.1 ribosomal protein S4 [Thladiantha dubia]

4.1e-104

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Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDS PPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_010131096.1 ribosomal protein S4 [Benincasa hispida]

7.0e-104

98.51

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSR L+QNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

YP_247601.1 ribosomal protein S4 [Cucumis sativus]

7.0e-104

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Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYR PRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU11 30S ribosomal protein S4, chloroplastic

4.0e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A1X9Q1U9 30S ribosomal protein S4, chloroplastic

4.0e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A218KG36 30S ribosomal protein S4, chloroplastic

4.0e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A249RZ87 30S ribosomal protein S4, chloroplastic

4.0e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

A0A286NFR5 30S ribosomal protein S4, chloroplastic

4.0e-105

99.5

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

SwissProt top hits

e value

%identity

Alignment

A6MM38 30S ribosomal protein S4, chloroplastic

3.2e-99

92.04

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGK+SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIP ARQLVNHRHILVNG IVDIPSYRCKPRDIITAKDE+KSR LIQNYLDSSP +ELPKHLTL   QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q09FV9 30S ribosomal protein S4, chloroplastic

1.0e-97

91.04

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRP  G+DL+NQSRSGK+SQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIP ARQLVNHRHILVNG IVDIPSYRCKPRDIIT +DE+KSR LIQNYLDSSP +ELPKHLTL   QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q1KXV7 30S ribosomal protein S4, chloroplastic

4.6e-98

90.55

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLT+KRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        + TIP ARQLVNHRHILVNG IVDIPSYRCKPRD I A+DE+KSR LIQN LDSSPP+ELP HLTLQP QYKGLVNQIIDSKWV LKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q49KZ6 30S ribosomal protein S4, chloroplastic

1.9e-99

90.55

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRP+ G+DL+NQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNG IVDIPSYRCKPRDIITA+D++KSR +IQNY DSSP +E+PKHLTL P QYKGLVNQIIDSKW+ LKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Q4VZH3 30S ribosomal protein S4, chloroplastic

9.2e-107

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYR PRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        +STIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

Arabidopsis top hits

e value

%identity

Alignment

AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein

2.3e-04

41.51

Show/hide

Query:  EMRLDNILFRLGMSSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKD
        E R D I  RL    TIPQARQ ++HR + VN  +V I  ++    DII+ ++
Subjt:  EMRLDNILFRLGMSSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKD

ATCG00380.1 chloroplast ribosomal protein S4

3.2e-94

88.06

Show/hide

Query:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
        MSRYRGPRFKKIRRLGALPGLTSKRPK G+DL+NQSRS KKSQYRIRLEEKQKLRFHYGLTE QLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM
Subjt:  MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGM

Query:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ
        + TIPQARQLVNH HILVNG IVDIPSYRCKPRDIIT KDE+ SRTL+QN LDSS P+ELP HLTL   QY+GLVNQIID K V LKINELLVVEYYSRQ
Subjt:  SSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQ

Query:  T
        T
Subjt:  T

ATMG00290.1 mitochondrial ribosomal protein S4

2.3e-04

41.51

Show/hide

Query:  EMRLDNILFRLGMSSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKD
        E R D I  RL    TIPQARQ ++HR + VN  +V I  ++    DII+ ++
Subjt:  EMRLDNILFRLGMSSTIPQARQLVNHRHILVNGSIVDIPSYRCKPRDIITAKD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGCGTTACAGAGGGCCTCGTTTCAAAAAAATACGCCGTCTGGGGGCTTTACCGGGACTAACTAGTAAAAGGCCCAAAACCGGAAACGATCTTAAAAACCAATCGCG
TTCCGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCGGAA
AAGCCAAAGGATCAACGGGTCAAGTTTTACTACAATTACTTGAAATGCGTTTGGATAACATCCTTTTTCGATTGGGTATGTCTTCGACTATTCCTCAAGCCCGACAATTA
GTTAATCATAGACATATTTTAGTTAATGGTTCTATAGTGGATATACCAAGTTATCGGTGCAAACCCCGAGATATTATTACAGCAAAAGATGAAAAAAAATCGAGAACACT
GATTCAAAATTATCTTGATTCATCCCCCCCTCAGGAATTGCCAAAACATTTGACTCTTCAGCCATTGCAATATAAAGGATTAGTCAATCAAATAATAGATAGTAAATGGG
TCAGTTTAAAAATAAATGAATTGCTCGTTGTAGAATATTATTCTCGTCAGACTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSRYRGPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMSSTIPQARQL
VNHRHILVNGSIVDIPSYRCKPRDIITAKDEKKSRTLIQNYLDSSPPQELPKHLTLQPLQYKGLVNQIIDSKWVSLKINELLVVEYYSRQT

PI0007374 (gene) of Melon (PI 482460) v1 genome