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PI0007384 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007384
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:7597020..7597589
RNA-Seq ExpressionPI0007384
SyntenyPI0007384
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6677.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6677.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6677.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6677.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA+QTVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL++MV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-6677.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein7.0e-6777.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

A0A5A7TU93 Gag/pol protein7.0e-6777.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

A0A5A7TWB9 Gag/pol protein7.0e-6777.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

A0A5A7V6N0 Gag/pol protein7.0e-6777.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA+QTVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL++MV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

A0A5D3CPJ6 Gag/pol protein7.0e-6777.27Show/hide
Query:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ Y+RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMFGQ S QI H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF
        NVAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA  +  F
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCA
CCTTCATCTTCTGGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTCAGGGATGCATATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTGCACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCTGGCACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAGAGTATACCATGACTACCCTCCT
TAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCA
CCTTCATCTTCTGGGACTAA
Protein sequenceShow/hide protein sequence
MEECPPSPVRNASQTVRDAYDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFGQPSIQIWHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGAVI
DEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAQVSEGFILWNQVCTFIFWD