; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007386 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007386
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:11798696..11799522
RNA-Seq ExpressionPI0007386
SyntenyPI0007386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]3.7e-7368.52Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        M ENSQNFGNRA ELDN LTKEV+ELKSQMLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA  +S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQPD+ANVSAISLRSGKIL+TP++ E+K+TS  + L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+  PS+SK +K
Subjt:  EKLETSTLPSSSKVEK

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-7268.06Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MA+NSQ FGNRASEL+NSLTKEV+ELKSQMLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE N+++KYDP+SNTYNTGW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA ++S+NQ TNL+D++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQP+HANVS ISLRSGKIL+TPS+ E+K+TS P+ L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+   S+ K +K
Subjt:  EKLETSTLPSSSKVEK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.9e-7368.52Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MAENSQ+F NRASELDNSLTKEV+ELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA S+S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KL AQ ++ANVSA+SLRSGKIL+TP++ E+K TS P+ L  K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+  P +SK +K
Subjt:  EKLETSTLPSSSKVEK

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.3e-7368.66Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGND
        MA+N Q+FGNRASE DNSLTKEV+ELKSQMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++R+YDPHSNTYN+GW       WGND
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGND

Query:  NQRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKN
        NQ+ +QA S+S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQ DHANVSAISLRSGKIL+TP++ E+K+TS P+ L +K+E  
Subjt:  NQRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKN

Query:  EEKLETSTLPSSSKVEK
        EEK+ET+  PS+SK +K
Subjt:  EEKLETSTLPSSSKVEK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.4e-7471.71Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MAENS++FGNRASELDNSLTKEV+ELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA S+S+NQGTNLED++KA ATNT+SFQ +MKQQM+ LT +ISK++GK KLPAQPDHANVSAISLRSGKIL+TP++ E+KLTS P+ L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLET
        EK+++
Subjt:  EKLET

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein5.3e-7368.06Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MA+NSQ FGNRASEL+NSLTKEV+ELKSQMLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE N+++KYDP+SNTYNTGW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA ++S+NQ TNL+D++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQP+HANVS ISLRSGKIL+TPS+ E+K+TS P+ L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+   S+ K +K
Subjt:  EKLETSTLPSSSKVEK

A0A5A7VQ60 Retrotransposon gag protein4.0e-7368.66Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGND
        MA+N Q+FGNRASE DNSLTKEV+ELKSQMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++R+YDPHSNTYN+GW       WGND
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGND

Query:  NQRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKN
        NQ+ +QA S+S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQ DHANVSAISLRSGKIL+TP++ E+K+TS P+ L +K+E  
Subjt:  NQRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKN

Query:  EEKLETSTLPSSSKVEK
        EEK+ET+  PS+SK +K
Subjt:  EEKLETSTLPSSSKVEK

A0A5D3CB46 Retrotransposon gag protein1.6e-7471.71Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MAENS++FGNRASELDNSLTKEV+ELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA S+S+NQGTNLED++KA ATNT+SFQ +MKQQM+ LT +ISK++GK KLPAQPDHANVSAISLRSGKIL+TP++ E+KLTS P+ L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLET
        EK+++
Subjt:  EKLET

A0A5D3CRR8 Retrotransposon gag protein2.4e-7368.52Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        MAENSQ+F NRASELDNSLTKEV+ELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA S+S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KL AQ ++ANVSA+SLRSGKIL+TP++ E+K TS P+ L  K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+  P +SK +K
Subjt:  EKLETSTLPSSSKVEK

E5GBZ4 Retrotransposon gag protein1.8e-7368.52Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN
        M ENSQNFGNRA ELDN LTKEV+ELKSQMLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN+GW       WGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGW-------WGNDN

Query:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE
        Q+ +QA  +S+NQGTNLED++KA ATNT+SFQ EMKQQM+ LT +ISK++GK KLPAQPD+ANVSAISLRSGKIL+TP++ E+K+TS  + L +K+E  E
Subjt:  QRPSQATSSSNNQGTNLEDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSS-EEKLTSTPILLENKDEKNE

Query:  EKLETSTLPSSSKVEK
        EK+ET+  PS+SK +K
Subjt:  EKLETSTLPSSSKVEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAATTCACAGAATTTTGGAAATAGGGCATCCGAGCTCGACAATTCATTAACCAAGGAAGTAAATGAACTTAAATCTCAGATGCTTAATATGACTACTTTACT
AACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCTAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGTCCTGACTTAGTGGAAGAAGCAAATGTCA
TTAGGAAGTACGATCCTCATAGCAATACTTACAATACCGGTTGGTGGGGAAACGACAACCAAAGACCTTCACAAGCAACCTCCTCTTCAAACAATCAAGGAACAAATTTG
GAAGATTTAGTTAAAGCTTTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACTAAATCAATTAGCAAGCTAGAAGGTAAAGTCAA
ACTTCCGGCTCAACCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGCTAACTTCTACCCCTATCCTTC
TAGAAAACAAGGATGAGAAAAATGAAGAAAAATTAGAAACTAGTACTTTGCCATCTAGTTCTAAAGTTGAGAAGAGAGTTATCGTACCCAAGGGAGCAAACCGCAACTTC
AAATTGATGTTAGGTTTAAATGATAAGAGAAATAAAGCTTCAAGGCACAAAAGAGTATTAGTAGTAGGGGGTTTGTTGTTGCGAGAAAATAAAAGGAAAATAAAAGGGAG
TAAAGAAATGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAATTCACAGAATTTTGGAAATAGGGCATCCGAGCTCGACAATTCATTAACCAAGGAAGTAAATGAACTTAAATCTCAGATGCTTAATATGACTACTTTACT
AACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCTAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGTCCTGACTTAGTGGAAGAAGCAAATGTCA
TTAGGAAGTACGATCCTCATAGCAATACTTACAATACCGGTTGGTGGGGAAACGACAACCAAAGACCTTCACAAGCAACCTCCTCTTCAAACAATCAAGGAACAAATTTG
GAAGATTTAGTTAAAGCTTTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACTAAATCAATTAGCAAGCTAGAAGGTAAAGTCAA
ACTTCCGGCTCAACCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGCTAACTTCTACCCCTATCCTTC
TAGAAAACAAGGATGAGAAAAATGAAGAAAAATTAGAAACTAGTACTTTGCCATCTAGTTCTAAAGTTGAGAAGAGAGTTATCGTACCCAAGGGAGCAAACCGCAACTTC
AAATTGATGTTAGGTTTAAATGATAAGAGAAATAAAGCTTCAAGGCACAAAAGAGTATTAGTAGTAGGGGGTTTGTTGTTGCGAGAAAATAAAAGGAAAATAAAAGGGAG
TAAAGAAATGGAGTAG
Protein sequenceShow/hide protein sequence
MAENSQNFGNRASELDNSLTKEVNELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNTGWWGNDNQRPSQATSSSNNQGTNL
EDLVKAFATNTISFQNEMKQQMSHLTKSISKLEGKVKLPAQPDHANVSAISLRSGKILETPSSEEKLTSTPILLENKDEKNEEKLETSTLPSSSKVEKRVIVPKGANRNF
KLMLGLNDKRNKASRHKRVLVVGGLLLRENKRKIKGSKEME