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PI0007422 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007422
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr06:16288436..16288729
RNA-Seq ExpressionPI0007422
SyntenyPI0007422
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-2768.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-2768.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
KAA0057285.1 uncharacterized protein E6C27_scaffold280G001260 [Cucumis melo var. makuwa]1.2e-2768.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-2768.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-2768.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase5.6e-2868.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
A0A5A7UXR6 Reverse transcriptase5.6e-2868.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
A0A5D3B7E7 Reverse transcriptase5.6e-2868.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
A0A5D3BRZ6 Reverse transcriptase5.6e-2868.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
A0A5D3C4R1 Reverse transcriptase5.6e-2868.48Show/hide
Query:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
        +IT   P+VVQTD+RQP+GLKMISA+QLKKGL+R EPTFMA P++      E VPK+I+R LEKY DVMPDSL ++LPPRR+IDHEIEL+PG
Subjt:  MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACGGAATCTAATCCCACCGTTGTACAAACAGACATTCGTCAGCCCAATGGATTAAAAATGATTTCGGCCCTACAGCTGAAGAAGGGCCTCGCTCGCAGTGAACC
GACTTTCATGGCCACTCCGATTGAACCGCTCGGGACTCAGGAAGAAGTAGTCCCGAAAGACATTCTGCGTGCCTTAGAGAAGTATAACGACGTGATGCCTGATAGTCTGT
CCGAGACTCTACCGCCAAGAAGAATAATTGATCATGAGATTGAACTGATGCCAGGGCAAAACTGCTGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACGGAATCTAATCCCACCGTTGTACAAACAGACATTCGTCAGCCCAATGGATTAAAAATGATTTCGGCCCTACAGCTGAAGAAGGGCCTCGCTCGCAGTGAACC
GACTTTCATGGCCACTCCGATTGAACCGCTCGGGACTCAGGAAGAAGTAGTCCCGAAAGACATTCTGCGTGCCTTAGAGAAGTATAACGACGTGATGCCTGATAGTCTGT
CCGAGACTCTACCGCCAAGAAGAATAATTGATCATGAGATTGAACTGATGCCAGGGCAAAACTGCTGGCAATGA
Protein sequenceShow/hide protein sequence
MITESNPTVVQTDIRQPNGLKMISALQLKKGLARSEPTFMATPIEPLGTQEEVVPKDILRALEKYNDVMPDSLSETLPPRRIIDHEIELMPGQNCWQ