CuGenDBv2

Gene ID	PI0007424
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Alpha-amylase
Genome location	chr08:17665454..17666759
RNA-Seq Expression	PI0007424
Synteny	PI0007424
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-79

77.89

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        M AI++ST   IR+   NSRP + S M SH PSLVF   +TR RQ S  S VS PC R   L PKSS+EN DI+PSED+PEDGVSLGTMKLP DIDIA+F
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEIS
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEIS

XP_004143327.1 uncharacterized protein LOC101214488 [Cucumis sativus]

2.2e-105

96.02

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        MDAISYSTNQFIRYPN NSRPCVFS MPSHNPSLVFFAS+TR+RQ+SNFSQVSGPCHR PKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD DIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_008462584.1 PREDICTED: uncharacterized protein LOC103500909 [Cucumis melo]

5.9e-103

94.03

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        MDAISYSTNQF R+PN NSRPCV SPMPSHNPSLVFFAS+TRHRQ+S FSQ SGPCHR   LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD DIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]

6.0e-79

77.61

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        M AI++ST   IR+   NSRP + S M SH PSLVF   +TR RQ S  S VS PC R   L PKSS+EN DI PSED+PEDGVSLGTMKLP DIDIA+F
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]

8.1e-92

87.06

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        M+AIS+ST QFI Y   NSRPC+ SPM SH PSLVF A +TRHRQ+S FSQ+S PC R  KLVPKSSDEN DIVPSEDDPEDGVSLGTMKLP DIDIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATA+T+PIFRAIRNGRL+DQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFD4 Uncharacterized protein

1.1e-105

96.02

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        MDAISYSTNQFIRYPN NSRPCVFS MPSHNPSLVFFAS+TR+RQ+SNFSQVSGPCHR PKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD DIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A1S3CH91 uncharacterized protein LOC103500909

2.9e-103

94.03

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        MDAISYSTNQF R+PN NSRPCV SPMPSHNPSLVFFAS+TRHRQ+S FSQ SGPCHR   LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD DIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A5A7SHD0 Uncharacterized protein

2.9e-103

94.03

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        MDAISYSTNQF R+PN NSRPCV SPMPSHNPSLVFFAS+TRHRQ+S FSQ SGPCHR   LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLD DIARF
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A6J1HDQ9 uncharacterized protein LOC111463229

6.5e-79

76.62

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        M  I++ST   IR+   NSRP + S M SH PSLVF   +TR RQ S  S +S PC R   L PKSS+EN DI+PSED+PEDGVSLGTMKLP DIDIA+F
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

A0A6J1I6G0 uncharacterized protein LOC111471157

2.9e-79

77.61

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Query:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF
        M AI++ST   IR+   NSRP + S M SH PSLVF   +TR RQ S  S VS PC R   L PKSS+EN DI PSED+PEDGVSLGTMKLP DIDIA+F
Subjt:  MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARF

Query:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR
        +VLLFQWANSLCQGANLPLPVPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI+ 
Subjt:  QVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISR

Query:  V
        V
Subjt:  V

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G36145.1 unknown protein

9.3e-46

67.38

Show/hide

Query:  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFPATAS
        +V  +S  N  +   E   EDGVSLGTMKLP+D D+ARF+ LLFQWANSLCQGANLPLPVPLKVD+I  G RLGFI + D GKT+V VYIDCLVF  T  
Subjt:  LVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARFQVLLFQWANSLCQGANLPLPVPLKVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFPATAS

Query:  TSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV
           +F+A RNGR KD++PPGE RIMRSLLGALKK+VEI+RV
Subjt:  TSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV

Sequences

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CDS sequence

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ATGGACGCCATTTCTTATTCAACAAACCAATTCATTCGTTACCCAAATGCCAATTCTCGCCCATGTGTTTTCTCTCCAATGCCGTCTCATAATCCGTCACTGGTTTTCTT
CGCTTCGGACACTCGGCATCGCCAACTCTCCAATTTCTCCCAAGTCTCAGGTCCGTGCCACAGGACTCCCAAGCTGGTGCCTAAGTCTTCGGATGAGAACAACGACATTG
TGCCCTCAGAAGATGACCCTGAAGATGGAGTATCGCTTGGGACTATGAAATTGCCTTTGGACATTGACATTGCTAGGTTTCAGGTCTTACTCTTCCAGTGGGCCAATAGT
CTTTGTCAGGGAGCTAACTTGCCACTTCCAGTGCCATTGAAGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTTCT
TGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGTACTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAA
TTATGAGGAGTCTTTTGGGTGCTTTGAAAAAATCAGTTGAAATTTCTAGAGTATGA

mRNA sequence

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Protein sequence

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MDAISYSTNQFIRYPNANSRPCVFSPMPSHNPSLVFFASDTRHRQLSNFSQVSGPCHRTPKLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDIDIARFQVLLFQWANS
LCQGANLPLPVPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLGALKKSVEISRV

PI0007424 (gene) of Melon (PI 482460) v1 genome